RNA–Protein interactions for RNA: ENST00000430291.2

ARID1A-203, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 4

Gene ARID1A, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-203ENST00000430291 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
ARID1A-203ENST00000430291 ABCC9O60706 1549 aa21.94■■□□□ 1.1
ARID1A-203ENST00000430291 CCDC180Q9P1Z9 1646 aa21.41■■□□□ 1.02
ARID1A-203ENST00000430291 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
ARID1A-203ENST00000430291 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
ARID1A-203ENST00000430291 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
ARID1A-203ENST00000430291 NACADO15069 1562 aa20.36■□□□□ 0.85
ARID1A-203ENST00000430291 DCAF8L2P0C7V8 631 aa20.26■□□□□ 0.83
ARID1A-203ENST00000430291 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
ARID1A-203ENST00000430291 BICRAQ9NZM4 1560 aa20.13■□□□□ 0.81
ARID1A-203ENST00000430291 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
ARID1A-203ENST00000430291 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
ARID1A-203ENST00000430291 CECR2Q9BXF3 1484 aa19.77■□□□□ 0.76
ARID1A-203ENST00000430291 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
ARID1A-203ENST00000430291 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
ARID1A-203ENST00000430291 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
ARID1A-203ENST00000430291 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
ARID1A-203ENST00000430291 DNAJC5Q9H3Z4 198 aa19.56■□□□□ 0.72
ARID1A-203ENST00000430291 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
ARID1A-203ENST00000430291 CUX2O14529 1486 aa18.99■□□□□ 0.63
ARID1A-203ENST00000430291 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
ARID1A-203ENST00000430291 NCAPD3P42695 1498 aa18.84■□□□□ 0.61
ARID1A-203ENST00000430291 NESP48681 1621 aa18.77■□□□□ 0.6
ARID1A-203ENST00000430291 ATAD2BQ9ULI0 1458 aa18.75■□□□□ 0.59
ARID1A-203ENST00000430291 HMGXB3Q12766 1538 aa18.62■□□□□ 0.57
ARID1A-203ENST00000430291 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
ARID1A-203ENST00000430291 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
ARID1A-203ENST00000430291 SMARCA2P51531 1590 aa18.59■□□□□ 0.57
ARID1A-203ENST00000430291 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
ARID1A-203ENST00000430291 BAZ1BQ9UIG0 1483 aaKnown RBP18.49■□□□□ 0.55
ARID1A-203ENST00000430291 KIF21AQ7Z4S6 1674 aa18.47■□□□□ 0.55
ARID1A-203ENST00000430291 LAMC3Q9Y6N6 1575 aa18.44■□□□□ 0.54
ARID1A-203ENST00000430291 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
ARID1A-203ENST00000430291 BAZ1AQ9NRL2 1556 aaPredicted RBP18.39■□□□□ 0.53
ARID1A-203ENST00000430291 PDS5BQ9NTI5 1447 aa18.34■□□□□ 0.53
ARID1A-203ENST00000430291 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
ARID1A-203ENST00000430291 CADPSQ9ULU8 1353 aa18.25■□□□□ 0.51
ARID1A-203ENST00000430291 MRC2Q9UBG0 1479 aa18.23■□□□□ 0.51
ARID1A-203ENST00000430291 WDR62O43379 1518 aa18.22■□□□□ 0.51
ARID1A-203ENST00000430291 WIZO95785 1651 aa18.1■□□□□ 0.49
ARID1A-203ENST00000430291 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
ARID1A-203ENST00000430291 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
ARID1A-203ENST00000430291 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
ARID1A-203ENST00000430291 URB2Q14146 1524 aaKnown RBP17.97■□□□□ 0.47
ARID1A-203ENST00000430291 CFTRP13569 1480 aa17.95■□□□□ 0.46
ARID1A-203ENST00000430291 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
ARID1A-203ENST00000430291 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
ARID1A-203ENST00000430291 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
ARID1A-203ENST00000430291 ZNF608Q9ULD9 1512 aaPredicted RBP17.84■□□□□ 0.45
ARID1A-203ENST00000430291 ARHGEF11O15085 1522 aa17.82■□□□□ 0.44
ARID1A-203ENST00000430291 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
ARID1A-203ENST00000430291 CYB5RLQ6IPT4 315 aa17.76■□□□□ 0.43
ARID1A-203ENST00000430291 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
ARID1A-203ENST00000430291 IFT140Q96RY7 1462 aa17.72■□□□□ 0.43
ARID1A-203ENST00000430291 PRDM2Q13029 1718 aa17.71■□□□□ 0.43
ARID1A-203ENST00000430291 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
ARID1A-203ENST00000430291 TRHP20396 242 aaPredicted RBP17.65■□□□□ 0.42
ARID1A-203ENST00000430291 EIF4G3O43432 1585 aaKnown RBP17.65■□□□□ 0.42
ARID1A-203ENST00000430291 ARAP1Q96P48 1450 aa17.64■□□□□ 0.41
ARID1A-203ENST00000430291 CHD1O14646 1710 aa17.63■□□□□ 0.41
ARID1A-203ENST00000430291 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
ARID1A-203ENST00000430291 AQRO60306 1485 aaKnown RBP eCLIP17.61■□□□□ 0.411e-6■■■■□ 21.1
ARID1A-203ENST00000430291 TARBP1Q13395 1621 aaKnown RBP17.56■□□□□ 0.4
ARID1A-203ENST00000430291 FBLN2P98095 1184 aa17.54■□□□□ 0.4
ARID1A-203ENST00000430291 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
ARID1A-203ENST00000430291 ABCC8Q09428 1581 aa17.5■□□□□ 0.39
ARID1A-203ENST00000430291 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
ARID1A-203ENST00000430291 RAD54L2Q9Y4B4 1467 aa17.45■□□□□ 0.38
ARID1A-203ENST00000430291 TDRD9Q8NDG6 1382 aaKnown RBP17.43■□□□□ 0.38
ARID1A-203ENST00000430291 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
ARID1A-203ENST00000430291 CLASP1Q7Z460 1538 aa17.4■□□□□ 0.38
ARID1A-203ENST00000430291 SNAPC4Q5SXM2 1469 aa17.37■□□□□ 0.37
ARID1A-203ENST00000430291 SOGA1O94964 1423 aa17.37■□□□□ 0.37
ARID1A-203ENST00000430291 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
ARID1A-203ENST00000430291 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
ARID1A-203ENST00000430291 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
ARID1A-203ENST00000430291 MAGI1Q96QZ7 1491 aaPredicted RBP17.25■□□□□ 0.35
ARID1A-203ENST00000430291 CUX1P39880 1505 aa17.24■□□□□ 0.35
ARID1A-203ENST00000430291 GRIN2BQ13224 1484 aa17.23■□□□□ 0.35
ARID1A-203ENST00000430291 GAPVD1Q14C86 1478 aa17.23■□□□□ 0.35
ARID1A-203ENST00000430291 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
ARID1A-203ENST00000430291 SYNJ2O15056 1496 aa17.22■□□□□ 0.35
ARID1A-203ENST00000430291 ERCC6L2Q5T890 1561 aa17.19■□□□□ 0.34
ARID1A-203ENST00000430291 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
ARID1A-203ENST00000430291 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
ARID1A-203ENST00000430291 ABCA10Q8WWZ4 1543 aa17.05■□□□□ 0.32
ARID1A-203ENST00000430291 KIF13AQ9H1H9 1805 aa17.03■□□□□ 0.32
ARID1A-203ENST00000430291 CEP170Q5SW79 1584 aa17.03■□□□□ 0.32
ARID1A-203ENST00000430291 GRIN2AQ12879 1464 aa17.02■□□□□ 0.32
ARID1A-203ENST00000430291 NUP160Q12769 1436 aa17■□□□□ 0.31
ARID1A-203ENST00000430291 SHROOM2Q13796 1616 aa16.97■□□□□ 0.31
ARID1A-203ENST00000430291 ADAMTS12P58397 1594 aa16.96■□□□□ 0.31
ARID1A-203ENST00000430291 FHAD1B1AJZ9 1412 aa16.88■□□□□ 0.29
ARID1A-203ENST00000430291 KDM4FA0A1W2PPD8 638 aa16.87■□□□□ 0.29
ARID1A-203ENST00000430291 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
ARID1A-203ENST00000430291 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
ARID1A-203ENST00000430291 FAM69CQ0P6D2 419 aa16.86■□□□□ 0.29
ARID1A-203ENST00000430291 JPH4Q96JJ6 628 aa16.85■□□□□ 0.29
ARID1A-203ENST00000430291 ABCC10Q5T3U5 1492 aa16.83■□□□□ 0.28
ARID1A-203ENST00000430291 BIVM-ERCC5R4GMW8 1640 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 213.9 ms