RNA–Protein interactions for RNA: ENST00000428946.5

LRRC23-204, Transcript of leucine rich repeat containing 23, humanhuman

TSL 3

Gene LRRC23, Length 969 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC23-204ENST00000428946 NISCHQ9Y2I1 1504 aa45.25■■■■■ 4.83
LRRC23-204ENST00000428946 CCDC180Q9P1Z9 1646 aa40.53■■■■■ 4.08
LRRC23-204ENST00000428946 ABCC9O60706 1549 aa40.32■■■■■ 4.05
LRRC23-204ENST00000428946 RB1CC1Q8TDY2 1594 aa38.44■■■■□ 3.74
LRRC23-204ENST00000428946 NACADO15069 1562 aa38.2■■■■□ 3.71
LRRC23-204ENST00000428946 DCAF8L2P0C7V8 631 aa38.11■■■■□ 3.69
LRRC23-204ENST00000428946 UNC13AQ9UPW8 1703 aa37.71■■■■□ 3.63
LRRC23-204ENST00000428946 MYO15BQ96JP2 1530 aa37.69■■■■□ 3.62
LRRC23-204ENST00000428946 ZCCHC6Q5VYS8 1495 aaKnown RBP37.58■■■■□ 3.61
LRRC23-204ENST00000428946 PABPN1Q86U42 306 aaKnown RBP eCLIP37.56■■■■□ 3.6
LRRC23-204ENST00000428946 DNAJC5BQ9UF47 199 aa37.55■■■■□ 3.6
LRRC23-204ENST00000428946 BICRAQ9NZM4 1560 aa37.35■■■■□ 3.57
LRRC23-204ENST00000428946 DCAF1Q9Y4B6 1507 aa37.32■■■■□ 3.57
LRRC23-204ENST00000428946 SCRIBQ14160 1630 aa37.03■■■■□ 3.52
LRRC23-204ENST00000428946 SHROOM4Q9ULL8 1493 aa36.74■■■■□ 3.47
LRRC23-204ENST00000428946 CC2D2AQ9P2K1 1620 aa36.44■■■■□ 3.42
LRRC23-204ENST00000428946 EIF4G1Q04637 1599 aaKnown RBP36.4■■■■□ 3.42
LRRC23-204ENST00000428946 CECR2Q9BXF3 1484 aa36.25■■■■□ 3.39
LRRC23-204ENST00000428946 SMARCA4P51532 1647 aa35.3■■■■□ 3.24
LRRC23-204ENST00000428946 NCAPD3P42695 1498 aa35.23■■■■□ 3.23
LRRC23-204ENST00000428946 ATAD2BQ9ULI0 1458 aa35.22■■■■□ 3.23
LRRC23-204ENST00000428946 SMARCA2P51531 1590 aa35.12■■■■□ 3.21
LRRC23-204ENST00000428946 BAZ1AQ9NRL2 1556 aaPredicted RBP35.11■■■■□ 3.21
LRRC23-204ENST00000428946 HMGXB3Q12766 1538 aa35.05■■■■□ 3.2
LRRC23-204ENST00000428946 MROH2BQ7Z745 1585 aa34.91■■■■□ 3.18
LRRC23-204ENST00000428946 BAZ1BQ9UIG0 1483 aaKnown RBP34.91■■■■□ 3.18
LRRC23-204ENST00000428946 PEG3Q9GZU2 1588 aa34.88■■■■□ 3.17
LRRC23-204ENST00000428946 ERCC6Q03468 1493 aa34.78■■■■□ 3.16
LRRC23-204ENST00000428946 NESP48681 1621 aa34.73■■■■□ 3.15
LRRC23-204ENST00000428946 CUX2O14529 1486 aa34.57■■■■□ 3.12
LRRC23-204ENST00000428946 WIZO95785 1651 aa34.56■■■■□ 3.12
LRRC23-204ENST00000428946 LAMC3Q9Y6N6 1575 aa34.45■■■■□ 3.11
LRRC23-204ENST00000428946 KIF21AQ7Z4S6 1674 aa34.34■■■■□ 3.09
LRRC23-204ENST00000428946 THOC2Q8NI27 1593 aaKnown RBP34.33■■■■□ 3.09
LRRC23-204ENST00000428946 RSF1Q96T23 1441 aaPredicted RBP34.23■■■■□ 3.07
LRRC23-204ENST00000428946 DNAJC5Q9H3Z4 198 aa34.22■■■■□ 3.07
LRRC23-204ENST00000428946 PDS5BQ9NTI5 1447 aa34.2■■■■□ 3.06
LRRC23-204ENST00000428946 CADPSQ9ULU8 1353 aa34.18■■■■□ 3.06
LRRC23-204ENST00000428946 TOP2AP11388 1531 aaKnown RBP34.08■■■■□ 3.05
LRRC23-204ENST00000428946 MRC2Q9UBG0 1479 aa33.95■■■■□ 3.03
LRRC23-204ENST00000428946 CEP164Q9UPV0 1460 aa33.88■■■■□ 3.01
LRRC23-204ENST00000428946 WDR62O43379 1518 aa33.87■■■■□ 3.01
LRRC23-204ENST00000428946 CFTRP13569 1480 aa33.86■■■■□ 3.01
LRRC23-204ENST00000428946 FANCD2Q9BXW9 1451 aa33.85■■■■□ 3.01
LRRC23-204ENST00000428946 PRDM2Q13029 1718 aa33.68■■■□□ 2.98
LRRC23-204ENST00000428946 CCDC88BA6NC98 1476 aa33.68■■■□□ 2.98
LRRC23-204ENST00000428946 URB2Q14146 1524 aaKnown RBP33.58■■■□□ 2.97
LRRC23-204ENST00000428946 TOPBP1Q92547 1522 aa33.25■■■□□ 2.91
LRRC23-204ENST00000428946 DNMBPQ6XZF7 1577 aa33.16■■■□□ 2.9
LRRC23-204ENST00000428946 IFT140Q96RY7 1462 aa33.15■■■□□ 2.9
LRRC23-204ENST00000428946 ZNF608Q9ULD9 1512 aaPredicted RBP33.14■■■□□ 2.9
LRRC23-204ENST00000428946 ABCC8Q09428 1581 aa33.09■■■□□ 2.89
LRRC23-204ENST00000428946 SUPT5HO00267 1087 aaKnown RBP33.01■■■□□ 2.87
LRRC23-204ENST00000428946 EIF4G3O43432 1585 aaKnown RBP33■■■□□ 2.87
LRRC23-204ENST00000428946 OSCARQ8IYS5 282 aa32.98■■■□□ 2.87
LRRC23-204ENST00000428946 TARBP1Q13395 1621 aaKnown RBP32.95■■■□□ 2.87
LRRC23-204ENST00000428946 TRIM41Q8WV44 630 aa32.94■■■□□ 2.86
LRRC23-204ENST00000428946 POLA1P09884 1462 aaPredicted RBP32.93■■■□□ 2.86
LRRC23-204ENST00000428946 AQRO60306 1485 aaKnown RBP eCLIP32.85■■■□□ 2.85
LRRC23-204ENST00000428946 RAD54L2Q9Y4B4 1467 aa32.83■■■□□ 2.85
LRRC23-204ENST00000428946 CUX1P39880 1505 aa32.8■■■□□ 2.84
LRRC23-204ENST00000428946 FGD5Q6ZNL6 1462 aa32.78■■■□□ 2.84
LRRC23-204ENST00000428946 CHD1O14646 1710 aa32.76■■■□□ 2.83
LRRC23-204ENST00000428946 SOGA1O94964 1423 aa32.74■■■□□ 2.83
LRRC23-204ENST00000428946 RIMBP3CA6NJZ7 1639 aa32.67■■■□□ 2.82
LRRC23-204ENST00000428946 RIMBP3BA6NNM3 1639 aa32.67■■■□□ 2.82
LRRC23-204ENST00000428946 RIMBP3Q9UFD9 1639 aa32.67■■■□□ 2.82
LRRC23-204ENST00000428946 TDRD9Q8NDG6 1382 aaKnown RBP32.67■■■□□ 2.82
LRRC23-204ENST00000428946 WDR97A6NE52 1622 aa32.59■■■□□ 2.81
LRRC23-204ENST00000428946 FBLN2P98095 1184 aa32.57■■■□□ 2.8
LRRC23-204ENST00000428946 ARHGEF11O15085 1522 aa32.56■■■□□ 2.8
LRRC23-204ENST00000428946 SNAPC4Q5SXM2 1469 aa32.55■■■□□ 2.8
LRRC23-204ENST00000428946 PBRM1Q86U86 1689 aa32.45■■■□□ 2.79
LRRC23-204ENST00000428946 GRIN2BQ13224 1484 aa32.43■■■□□ 2.78
LRRC23-204ENST00000428946 MAGI1Q96QZ7 1491 aaPredicted RBP32.41■■■□□ 2.78
LRRC23-204ENST00000428946 ABCA10Q8WWZ4 1543 aa32.37■■■□□ 2.77
LRRC23-204ENST00000428946 GAPVD1Q14C86 1478 aa32.37■■■□□ 2.77
LRRC23-204ENST00000428946 ABCA5Q8WWZ7 1642 aa32.37■■■□□ 2.77
LRRC23-204ENST00000428946 BIVM-ERCC5R4GMW8 1640 aa32.34■■■□□ 2.77
LRRC23-204ENST00000428946 SYNJ1O43426 1573 aa32.34■■■□□ 2.77
LRRC23-204ENST00000428946 CHMP7Q8WUX9 453 aaPredicted RBP32.32■■■□□ 2.76
LRRC23-204ENST00000428946 TOP2BQ02880 1626 aa32.31■■■□□ 2.76
LRRC23-204ENST00000428946 SYNJ2O15056 1496 aa32.3■■■□□ 2.76
LRRC23-204ENST00000428946 CLASP1Q7Z460 1538 aa32.3■■■□□ 2.76
LRRC23-204ENST00000428946 WRNQ14191 1432 aaPredicted RBP eCLIP32.29■■■□□ 2.76
LRRC23-204ENST00000428946 ARAP1Q96P48 1450 aa32.27■■■□□ 2.76
LRRC23-204ENST00000428946 CYB5RLQ6IPT4 315 aa32.26■■■□□ 2.75
LRRC23-204ENST00000428946 ADAMTS12P58397 1594 aa32.12■■■□□ 2.73
LRRC23-204ENST00000428946 GRIN2AQ12879 1464 aa32.05■■■□□ 2.72
LRRC23-204ENST00000428946 CEP170Q5SW79 1584 aa31.98■■■□□ 2.71
LRRC23-204ENST00000428946 ERICH3Q5RHP9 1530 aa31.96■■■□□ 2.71
LRRC23-204ENST00000428946 FHAD1B1AJZ9 1412 aa31.94■■■□□ 2.7
LRRC23-204ENST00000428946 NUP160Q12769 1436 aa31.91■■■□□ 2.7
LRRC23-204ENST00000428946 ERCC6L2Q5T890 1561 aa31.89■■■□□ 2.7
LRRC23-204ENST00000428946 TRHP20396 242 aaPredicted RBP31.83■■■□□ 2.69
LRRC23-204ENST00000428946 SHROOM2Q13796 1616 aa31.78■■■□□ 2.68
LRRC23-204ENST00000428946 RUSC2Q8N2Y8 1516 aa31.66■■■□□ 2.66
LRRC23-204ENST00000428946 KIF27Q86VH2 1401 aa31.65■■■□□ 2.66
LRRC23-204ENST00000428946 CUL7Q14999 1698 aa31.6■■■□□ 2.65
LRRC23-204ENST00000428946 PRG4Q92954 1404 aaPredicted RBP31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms