RNA–Protein interactions for RNA: ENST00000428760.5

ATF2-213, Transcript of activating transcription factor 2, humanhuman

TSL 1 (best)

Gene ATF2, Length 1,989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF2-213ENST00000428760 NISCHQ9Y2I1 1504 aa18.33■□□□□ 0.53
ATF2-213ENST00000428760 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
ATF2-213ENST00000428760 ABCC9O60706 1549 aa16.06■□□□□ 0.16
ATF2-213ENST00000428760 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
ATF2-213ENST00000428760 AEBP2Q6ZN18 517 aaPredicted RBP15.35■□□□□ 0.05
ATF2-213ENST00000428760 DCAF8L2P0C7V8 631 aa15.34■□□□□ 0.05
ATF2-213ENST00000428760 NACADO15069 1562 aa15.33■□□□□ 0.04
ATF2-213ENST00000428760 ZCCHC6Q5VYS8 1495 aaKnown RBP15.28■□□□□ 0.04
ATF2-213ENST00000428760 UNC13AQ9UPW8 1703 aa15.23■□□□□ 0.03
ATF2-213ENST00000428760 MYO15BQ96JP2 1530 aa15.16■□□□□ 0.02
ATF2-213ENST00000428760 DCAF1Q9Y4B6 1507 aa15.13■□□□□ 0.01
ATF2-213ENST00000428760 BICRAQ9NZM4 1560 aa14.97□□□□□ -0.01
ATF2-213ENST00000428760 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
ATF2-213ENST00000428760 DNAJC5BQ9UF47 199 aa14.89□□□□□ -0.03
ATF2-213ENST00000428760 SCRIBQ14160 1630 aa14.83□□□□□ -0.04
ATF2-213ENST00000428760 SHROOM4Q9ULL8 1493 aa14.76□□□□□ -0.05
ATF2-213ENST00000428760 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
ATF2-213ENST00000428760 CHIC1Q5VXU3 224 aa14.58□□□□□ -0.08
ATF2-213ENST00000428760 EIF4G1Q04637 1599 aaKnown RBP14.58□□□□□ -0.08
ATF2-213ENST00000428760 CECR2Q9BXF3 1484 aa14.45□□□□□ -0.1
ATF2-213ENST00000428760 SMARCA4P51532 1647 aa14.18□□□□□ -0.14
ATF2-213ENST00000428760 MROH2BQ7Z745 1585 aa14.17□□□□□ -0.14
ATF2-213ENST00000428760 BAZ1AQ9NRL2 1556 aaPredicted RBP14.15□□□□□ -0.14
ATF2-213ENST00000428760 ATAD2BQ9ULI0 1458 aa14.11□□□□□ -0.15
ATF2-213ENST00000428760 NCAPD3P42695 1498 aa14.1□□□□□ -0.15
ATF2-213ENST00000428760 SMARCA2P51531 1590 aa14.08□□□□□ -0.15
ATF2-213ENST00000428760 HMGXB3Q12766 1538 aa14.07□□□□□ -0.16
ATF2-213ENST00000428760 RSF1Q96T23 1441 aaPredicted RBP14.06□□□□□ -0.16
ATF2-213ENST00000428760 PEG3Q9GZU2 1588 aa14.03□□□□□ -0.16
ATF2-213ENST00000428760 WIZO95785 1651 aa13.99□□□□□ -0.17
ATF2-213ENST00000428760 BAZ1BQ9UIG0 1483 aaKnown RBP13.96□□□□□ -0.17
ATF2-213ENST00000428760 NESP48681 1621 aa13.85□□□□□ -0.19
ATF2-213ENST00000428760 ERCC6Q03468 1493 aa13.85□□□□□ -0.19
ATF2-213ENST00000428760 SUPT5HO00267 1087 aaKnown RBP13.83□□□□□ -0.19
ATF2-213ENST00000428760 LAMC3Q9Y6N6 1575 aa13.83□□□□□ -0.2
ATF2-213ENST00000428760 CUX2O14529 1486 aa13.82□□□□□ -0.2
ATF2-213ENST00000428760 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
ATF2-213ENST00000428760 KIF21AQ7Z4S6 1674 aa13.8□□□□□ -0.2
ATF2-213ENST00000428760 THOC2Q8NI27 1593 aaKnown RBP13.77□□□□□ -0.21
ATF2-213ENST00000428760 CCDC88BA6NC98 1476 aa13.72□□□□□ -0.21
ATF2-213ENST00000428760 CADPSQ9ULU8 1353 aa13.68□□□□□ -0.22
ATF2-213ENST00000428760 PDS5BQ9NTI5 1447 aa13.66□□□□□ -0.22
ATF2-213ENST00000428760 PRDM2Q13029 1718 aa13.66□□□□□ -0.22
ATF2-213ENST00000428760 CFTRP13569 1480 aa13.61□□□□□ -0.23
ATF2-213ENST00000428760 DNAJC5Q9H3Z4 198 aa13.58□□□□□ -0.24
ATF2-213ENST00000428760 MRC2Q9UBG0 1479 aa13.57□□□□□ -0.24
ATF2-213ENST00000428760 WDR62O43379 1518 aa13.56□□□□□ -0.24
ATF2-213ENST00000428760 CEP164Q9UPV0 1460 aa13.54□□□□□ -0.24
ATF2-213ENST00000428760 FANCD2Q9BXW9 1451 aa13.53□□□□□ -0.24
ATF2-213ENST00000428760 URB2Q14146 1524 aaKnown RBP13.42□□□□□ -0.26
ATF2-213ENST00000428760 TOPBP1Q92547 1522 aa13.31□□□□□ -0.28
ATF2-213ENST00000428760 DNMBPQ6XZF7 1577 aa13.3□□□□□ -0.28
ATF2-213ENST00000428760 ABCC8Q09428 1581 aa13.28□□□□□ -0.28
ATF2-213ENST00000428760 CUX1P39880 1505 aa13.26□□□□□ -0.29
ATF2-213ENST00000428760 IFT140Q96RY7 1462 aa13.25□□□□□ -0.29
ATF2-213ENST00000428760 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
ATF2-213ENST00000428760 TARBP1Q13395 1621 aaKnown RBP13.23□□□□□ -0.29
ATF2-213ENST00000428760 ZNF608Q9ULD9 1512 aaPredicted RBP13.22□□□□□ -0.29
ATF2-213ENST00000428760 WRNQ14191 1432 aaPredicted RBP eCLIP13.21□□□□□ -0.29
ATF2-213ENST00000428760 POLA1P09884 1462 aaPredicted RBP13.2□□□□□ -0.3
ATF2-213ENST00000428760 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
ATF2-213ENST00000428760 FGD5Q6ZNL6 1462 aa13.18□□□□□ -0.3
ATF2-213ENST00000428760 CHD1O14646 1710 aa13.17□□□□□ -0.3
ATF2-213ENST00000428760 SYNJ1O43426 1573 aa13.17□□□□□ -0.3
ATF2-213ENST00000428760 SOGA1O94964 1423 aa13.16□□□□□ -0.3
ATF2-213ENST00000428760 WDR97A6NE52 1622 aa13.13□□□□□ -0.31
ATF2-213ENST00000428760 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
ATF2-213ENST00000428760 OSCARQ8IYS5 282 aa13.13□□□□□ -0.31
ATF2-213ENST00000428760 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
ATF2-213ENST00000428760 BIVM-ERCC5R4GMW8 1640 aa13.11□□□□□ -0.31
ATF2-213ENST00000428760 AQRO60306 1485 aaKnown RBP eCLIP13.11□□□□□ -0.319e-7■■■■□ 23.4
ATF2-213ENST00000428760 PBRM1Q86U86 1689 aa13.08□□□□□ -0.32
ATF2-213ENST00000428760 RIMBP3CA6NJZ7 1639 aa13.07□□□□□ -0.32
ATF2-213ENST00000428760 RIMBP3BA6NNM3 1639 aa13.07□□□□□ -0.32
ATF2-213ENST00000428760 RIMBP3Q9UFD9 1639 aa13.07□□□□□ -0.32
ATF2-213ENST00000428760 ABCA10Q8WWZ4 1543 aa13.05□□□□□ -0.32
ATF2-213ENST00000428760 TRIM41Q8WV44 630 aa13.02□□□□□ -0.32
ATF2-213ENST00000428760 SENP3Q9H4L4 574 aaPredicted RBP13.01□□□□□ -0.33
ATF2-213ENST00000428760 ABCA5Q8WWZ7 1642 aa13□□□□□ -0.33
ATF2-213ENST00000428760 ARHGEF11O15085 1522 aa13□□□□□ -0.33
ATF2-213ENST00000428760 SNAPC4Q5SXM2 1469 aa13□□□□□ -0.33
ATF2-213ENST00000428760 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
ATF2-213ENST00000428760 MAGI1Q96QZ7 1491 aaPredicted RBP12.98□□□□□ -0.33
ATF2-213ENST00000428760 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
ATF2-213ENST00000428760 CLASP1Q7Z460 1538 aa12.94□□□□□ -0.34
ATF2-213ENST00000428760 RUSC2Q8N2Y8 1516 aa12.94□□□□□ -0.34
ATF2-213ENST00000428760 FBLN2P98095 1184 aa12.93□□□□□ -0.34
ATF2-213ENST00000428760 IGF1RP08069 1367 aa12.92□□□□□ -0.34
ATF2-213ENST00000428760 SYNJ2O15056 1496 aa12.92□□□□□ -0.34
ATF2-213ENST00000428760 PHF23Q9BUL5 403 aaPredicted RBP12.92□□□□□ -0.34
ATF2-213ENST00000428760 KIF27Q86VH2 1401 aa12.91□□□□□ -0.34
ATF2-213ENST00000428760 ADAMTS12P58397 1594 aa12.88□□□□□ -0.35
ATF2-213ENST00000428760 CHMP7Q8WUX9 453 aaPredicted RBP12.88□□□□□ -0.35
ATF2-213ENST00000428760 ARAP1Q96P48 1450 aa12.87□□□□□ -0.35
ATF2-213ENST00000428760 ERICH3Q5RHP9 1530 aa12.87□□□□□ -0.35
ATF2-213ENST00000428760 FHAD1B1AJZ9 1412 aa12.84□□□□□ -0.35
ATF2-213ENST00000428760 GRIN2AQ12879 1464 aa12.82□□□□□ -0.36
ATF2-213ENST00000428760 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
ATF2-213ENST00000428760 CEP170Q5SW79 1584 aa12.8□□□□□ -0.36
ATF2-213ENST00000428760 CYB5RLQ6IPT4 315 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms