RNA–Protein interactions for RNA: ENST00000428660.1

AC006042.2-201, humanhuman

TSL 4 BASIC

Gene AC006042.2, Length 568 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006042.2-201ENST00000428660 NISCHQ9Y2I1 1504 aa41.57■■■■■ 4.25
AC006042.2-201ENST00000428660 CCDC180Q9P1Z9 1646 aa37.16■■■■□ 3.54
AC006042.2-201ENST00000428660 ABCC9O60706 1549 aa36.7■■■■□ 3.47
AC006042.2-201ENST00000428660 RB1CC1Q8TDY2 1594 aa35.11■■■■□ 3.21
AC006042.2-201ENST00000428660 NACADO15069 1562 aa34.96■■■■□ 3.19
AC006042.2-201ENST00000428660 DCAF8L2P0C7V8 631 aa34.77■■■■□ 3.16
AC006042.2-201ENST00000428660 MYO15BQ96JP2 1530 aa34.62■■■■□ 3.13
AC006042.2-201ENST00000428660 ZCCHC6Q5VYS8 1495 aaKnown RBP34.58■■■■□ 3.13
AC006042.2-201ENST00000428660 UNC13AQ9UPW8 1703 aa34.46■■■■□ 3.11
AC006042.2-201ENST00000428660 DCAF1Q9Y4B6 1507 aa34.35■■■■□ 3.09
AC006042.2-201ENST00000428660 PABPN1Q86U42 306 aaKnown RBP eCLIP34.19■■■■□ 3.06
AC006042.2-201ENST00000428660 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
AC006042.2-201ENST00000428660 DNAJC5BQ9UF47 199 aa34.03■■■■□ 3.04
AC006042.2-201ENST00000428660 SCRIBQ14160 1630 aa33.9■■■■□ 3.02
AC006042.2-201ENST00000428660 SHROOM4Q9ULL8 1493 aa33.65■■■□□ 2.98
AC006042.2-201ENST00000428660 EIF4G1Q04637 1599 aaKnown RBP33.24■■■□□ 2.91
AC006042.2-201ENST00000428660 CC2D2AQ9P2K1 1620 aa33.2■■■□□ 2.91
AC006042.2-201ENST00000428660 CECR2Q9BXF3 1484 aa32.99■■■□□ 2.87
AC006042.2-201ENST00000428660 SMARCA4P51532 1647 aa32.38■■■□□ 2.77
AC006042.2-201ENST00000428660 NCAPD3P42695 1498 aa32.26■■■□□ 2.75
AC006042.2-201ENST00000428660 ATAD2BQ9ULI0 1458 aa32.25■■■□□ 2.75
AC006042.2-201ENST00000428660 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
AC006042.2-201ENST00000428660 SMARCA2P51531 1590 aa32.17■■■□□ 2.74
AC006042.2-201ENST00000428660 HMGXB3Q12766 1538 aa32.11■■■□□ 2.73
AC006042.2-201ENST00000428660 MROH2BQ7Z745 1585 aa32.07■■■□□ 2.72
AC006042.2-201ENST00000428660 PEG3Q9GZU2 1588 aa32.04■■■□□ 2.72
AC006042.2-201ENST00000428660 BAZ1BQ9UIG0 1483 aaKnown RBP31.96■■■□□ 2.71
AC006042.2-201ENST00000428660 WIZO95785 1651 aa31.73■■■□□ 2.67
AC006042.2-201ENST00000428660 NESP48681 1621 aa31.69■■■□□ 2.66
AC006042.2-201ENST00000428660 ERCC6Q03468 1493 aa31.62■■■□□ 2.65
AC006042.2-201ENST00000428660 RSF1Q96T23 1441 aaPredicted RBP31.52■■■□□ 2.64
AC006042.2-201ENST00000428660 LAMC3Q9Y6N6 1575 aa31.5■■■□□ 2.63
AC006042.2-201ENST00000428660 CUX2O14529 1486 aa31.42■■■□□ 2.62
AC006042.2-201ENST00000428660 KIF21AQ7Z4S6 1674 aa31.34■■■□□ 2.61
AC006042.2-201ENST00000428660 TOP2AP11388 1531 aaKnown RBP31.33■■■□□ 2.61
AC006042.2-201ENST00000428660 THOC2Q8NI27 1593 aaKnown RBP31.31■■■□□ 2.6
AC006042.2-201ENST00000428660 CADPSQ9ULU8 1353 aa31.29■■■□□ 2.6
AC006042.2-201ENST00000428660 PDS5BQ9NTI5 1447 aa31.23■■■□□ 2.59
AC006042.2-201ENST00000428660 CFTRP13569 1480 aa31.05■■■□□ 2.56
AC006042.2-201ENST00000428660 MRC2Q9UBG0 1479 aa31■■■□□ 2.55
AC006042.2-201ENST00000428660 FANCD2Q9BXW9 1451 aa30.97■■■□□ 2.55
AC006042.2-201ENST00000428660 CEP164Q9UPV0 1460 aa30.96■■■□□ 2.55
AC006042.2-201ENST00000428660 WDR62O43379 1518 aa30.94■■■□□ 2.54
AC006042.2-201ENST00000428660 CCDC88BA6NC98 1476 aa30.94■■■□□ 2.54
AC006042.2-201ENST00000428660 PRDM2Q13029 1718 aa30.89■■■□□ 2.54
AC006042.2-201ENST00000428660 DNAJC5Q9H3Z4 198 aa30.85■■■□□ 2.53
AC006042.2-201ENST00000428660 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
AC006042.2-201ENST00000428660 TOPBP1Q92547 1522 aa30.46■■■□□ 2.47
AC006042.2-201ENST00000428660 SUPT5HO00267 1087 aaKnown RBP30.39■■■□□ 2.46
AC006042.2-201ENST00000428660 DNMBPQ6XZF7 1577 aa30.39■■■□□ 2.46
AC006042.2-201ENST00000428660 ABCC8Q09428 1581 aa30.33■■■□□ 2.45
AC006042.2-201ENST00000428660 IFT140Q96RY7 1462 aa30.31■■■□□ 2.44
AC006042.2-201ENST00000428660 ZNF608Q9ULD9 1512 aaPredicted RBP30.27■■■□□ 2.44
AC006042.2-201ENST00000428660 TARBP1Q13395 1621 aaKnown RBP30.18■■■□□ 2.42
AC006042.2-201ENST00000428660 POLA1P09884 1462 aaPredicted RBP30.17■■■□□ 2.42
AC006042.2-201ENST00000428660 EIF4G3O43432 1585 aaKnown RBP30.16■■■□□ 2.42
AC006042.2-201ENST00000428660 CUX1P39880 1505 aa30.12■■■□□ 2.41
AC006042.2-201ENST00000428660 FGD5Q6ZNL6 1462 aa30.05■■■□□ 2.4
AC006042.2-201ENST00000428660 RAD54L2Q9Y4B4 1467 aa30.05■■■□□ 2.4
AC006042.2-201ENST00000428660 AQRO60306 1485 aaKnown RBP eCLIP30.01■■■□□ 2.4
AC006042.2-201ENST00000428660 SOGA1O94964 1423 aa29.97■■■□□ 2.39
AC006042.2-201ENST00000428660 OSCARQ8IYS5 282 aa29.97■■■□□ 2.39
AC006042.2-201ENST00000428660 WDR97A6NE52 1622 aa29.89■■■□□ 2.37
AC006042.2-201ENST00000428660 TDRD9Q8NDG6 1382 aaKnown RBP29.89■■■□□ 2.37
AC006042.2-201ENST00000428660 CHD1O14646 1710 aa29.88■■■□□ 2.37
AC006042.2-201ENST00000428660 BIVM-ERCC5R4GMW8 1640 aa29.76■■■□□ 2.35
AC006042.2-201ENST00000428660 SNAPC4Q5SXM2 1469 aa29.75■■■□□ 2.35
AC006042.2-201ENST00000428660 SYNJ1O43426 1573 aa29.75■■■□□ 2.35
AC006042.2-201ENST00000428660 TOP2BQ02880 1626 aa29.74■■■□□ 2.35
AC006042.2-201ENST00000428660 WRNQ14191 1432 aaPredicted RBP eCLIP29.71■■■□□ 2.35
AC006042.2-201ENST00000428660 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
AC006042.2-201ENST00000428660 PBRM1Q86U86 1689 aa29.7■■■□□ 2.35
AC006042.2-201ENST00000428660 GRIN2BQ13224 1484 aa29.69■■■□□ 2.34
AC006042.2-201ENST00000428660 TRIM41Q8WV44 630 aa29.69■■■□□ 2.34
AC006042.2-201ENST00000428660 RIMBP3CA6NJZ7 1639 aa29.69■■■□□ 2.34
AC006042.2-201ENST00000428660 RIMBP3BA6NNM3 1639 aa29.69■■■□□ 2.34
AC006042.2-201ENST00000428660 ABCA5Q8WWZ7 1642 aa29.69■■■□□ 2.34
AC006042.2-201ENST00000428660 RIMBP3Q9UFD9 1639 aa29.69■■■□□ 2.34
AC006042.2-201ENST00000428660 MAGI1Q96QZ7 1491 aaPredicted RBP29.66■■■□□ 2.34
AC006042.2-201ENST00000428660 FBLN2P98095 1184 aa29.65■■■□□ 2.34
AC006042.2-201ENST00000428660 GAPVD1Q14C86 1478 aa29.65■■■□□ 2.34
AC006042.2-201ENST00000428660 ARHGEF11O15085 1522 aa29.62■■■□□ 2.33
AC006042.2-201ENST00000428660 SYNJ2O15056 1496 aa29.55■■■□□ 2.32
AC006042.2-201ENST00000428660 CLASP1Q7Z460 1538 aa29.51■■■□□ 2.32
AC006042.2-201ENST00000428660 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
AC006042.2-201ENST00000428660 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
AC006042.2-201ENST00000428660 ARAP1Q96P48 1450 aa29.37■■■□□ 2.29
AC006042.2-201ENST00000428660 GRIN2AQ12879 1464 aa29.34■■■□□ 2.29
AC006042.2-201ENST00000428660 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
AC006042.2-201ENST00000428660 FHAD1B1AJZ9 1412 aa29.28■■■□□ 2.28
AC006042.2-201ENST00000428660 CYB5RLQ6IPT4 315 aa29.27■■■□□ 2.28
AC006042.2-201ENST00000428660 CEP170Q5SW79 1584 aa29.26■■■□□ 2.27
AC006042.2-201ENST00000428660 NUP160Q12769 1436 aa29.22■■■□□ 2.27
AC006042.2-201ENST00000428660 ERCC6L2Q5T890 1561 aa29.11■■■□□ 2.25
AC006042.2-201ENST00000428660 SHROOM2Q13796 1616 aa29.09■■■□□ 2.25
AC006042.2-201ENST00000428660 KIF27Q86VH2 1401 aa29.09■■■□□ 2.25
AC006042.2-201ENST00000428660 IGF1RP08069 1367 aa29.03■■■□□ 2.24
AC006042.2-201ENST00000428660 CUL7Q14999 1698 aa29.03■■■□□ 2.24
AC006042.2-201ENST00000428660 RUSC2Q8N2Y8 1516 aa29.02■■■□□ 2.24
AC006042.2-201ENST00000428660 PRG4Q92954 1404 aaPredicted RBP28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 286.8 ms