RNA–Protein interactions for RNA: ENST00000428634.1

PEX11B-202, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2

Gene PEX11B, Length 667 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-202ENST00000428634 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
PEX11B-202ENST00000428634 CCDC180Q9P1Z9 1646 aa24.88■■□□□ 1.57
PEX11B-202ENST00000428634 ABCC9O60706 1549 aa23.93■■□□□ 1.42
PEX11B-202ENST00000428634 ZCCHC6Q5VYS8 1495 aaKnown RBP23.65■■□□□ 1.38
PEX11B-202ENST00000428634 DCAF8L2P0C7V8 631 aa23.53■■□□□ 1.36
PEX11B-202ENST00000428634 DCAF1Q9Y4B6 1507 aa23.42■■□□□ 1.34
PEX11B-202ENST00000428634 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
PEX11B-202ENST00000428634 NACADO15069 1562 aa23.33■■□□□ 1.33
PEX11B-202ENST00000428634 RB1CC1Q8TDY2 1594 aa23.23■■□□□ 1.31
PEX11B-202ENST00000428634 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
PEX11B-202ENST00000428634 SHROOM4Q9ULL8 1493 aa22.67■■□□□ 1.22
PEX11B-202ENST00000428634 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
PEX11B-202ENST00000428634 PABPN1Q86U42 306 aaKnown RBP eCLIP22.48■■□□□ 1.19
PEX11B-202ENST00000428634 BICRAQ9NZM4 1560 aa22.44■■□□□ 1.18
PEX11B-202ENST00000428634 CECR2Q9BXF3 1484 aa21.96■■□□□ 1.11
PEX11B-202ENST00000428634 BAZ1AQ9NRL2 1556 aaPredicted RBP21.9■■□□□ 1.1
PEX11B-202ENST00000428634 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
PEX11B-202ENST00000428634 SMARCA4P51532 1647 aa21.81■■□□□ 1.08
PEX11B-202ENST00000428634 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
PEX11B-202ENST00000428634 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
PEX11B-202ENST00000428634 CC2D2AQ9P2K1 1620 aa21.63■■□□□ 1.05
PEX11B-202ENST00000428634 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
PEX11B-202ENST00000428634 SMARCA2P51531 1590 aa21.61■■□□□ 1.05
PEX11B-202ENST00000428634 ATAD2BQ9ULI0 1458 aa21.61■■□□□ 1.05
PEX11B-202ENST00000428634 PEG3Q9GZU2 1588 aa21.59■■□□□ 1.05
PEX11B-202ENST00000428634 WIZO95785 1651 aa21.54■■□□□ 1.04
PEX11B-202ENST00000428634 NCAPD3P42695 1498 aa21.52■■□□□ 1.04
PEX11B-202ENST00000428634 DNAJC5BQ9UF47 199 aa21.49■■□□□ 1.03
PEX11B-202ENST00000428634 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
PEX11B-202ENST00000428634 HMGXB3Q12766 1538 aa21.45■■□□□ 1.02
PEX11B-202ENST00000428634 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.01
PEX11B-202ENST00000428634 CCDC88BA6NC98 1476 aa21.14■□□□□ 0.98
PEX11B-202ENST00000428634 CADPSQ9ULU8 1353 aa20.96■□□□□ 0.95
PEX11B-202ENST00000428634 CFTRP13569 1480 aa20.9■□□□□ 0.94
PEX11B-202ENST00000428634 LAMC3Q9Y6N6 1575 aa20.86■□□□□ 0.93
PEX11B-202ENST00000428634 NESP48681 1621 aa20.82■□□□□ 0.92
PEX11B-202ENST00000428634 PDS5BQ9NTI5 1447 aa20.77■□□□□ 0.91
PEX11B-202ENST00000428634 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
PEX11B-202ENST00000428634 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
PEX11B-202ENST00000428634 AEBP2Q6ZN18 517 aaPredicted RBP20.66■□□□□ 0.9
PEX11B-202ENST00000428634 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
PEX11B-202ENST00000428634 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
PEX11B-202ENST00000428634 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
PEX11B-202ENST00000428634 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
PEX11B-202ENST00000428634 WRNQ14191 1432 aaPredicted RBP eCLIP20.52■□□□□ 0.87
PEX11B-202ENST00000428634 ABCC8Q09428 1581 aa20.49■□□□□ 0.87
PEX11B-202ENST00000428634 MRC2Q9UBG0 1479 aa20.49■□□□□ 0.87
PEX11B-202ENST00000428634 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
PEX11B-202ENST00000428634 URB2Q14146 1524 aaKnown RBP20.42■□□□□ 0.86
PEX11B-202ENST00000428634 DNMBPQ6XZF7 1577 aa20.42■□□□□ 0.86
PEX11B-202ENST00000428634 CUX1P39880 1505 aa20.41■□□□□ 0.86
PEX11B-202ENST00000428634 TOPBP1Q92547 1522 aa20.4■□□□□ 0.86
PEX11B-202ENST00000428634 THOC2Q8NI27 1593 aaKnown RBP20.38■□□□□ 0.85
PEX11B-202ENST00000428634 WDR62O43379 1518 aa20.37■□□□□ 0.85
PEX11B-202ENST00000428634 TOP2BQ02880 1626 aa20.36■□□□□ 0.85
PEX11B-202ENST00000428634 SYNJ1O43426 1573 aa20.36■□□□□ 0.85
PEX11B-202ENST00000428634 BIVM-ERCC5R4GMW8 1640 aa20.33■□□□□ 0.84
PEX11B-202ENST00000428634 FGD5Q6ZNL6 1462 aa20.29■□□□□ 0.84
PEX11B-202ENST00000428634 POLA1P09884 1462 aaPredicted RBP20.26■□□□□ 0.83
PEX11B-202ENST00000428634 SOGA1O94964 1423 aa20.23■□□□□ 0.83
PEX11B-202ENST00000428634 CUX2O14529 1486 aa20.21■□□□□ 0.83
PEX11B-202ENST00000428634 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
PEX11B-202ENST00000428634 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
PEX11B-202ENST00000428634 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
PEX11B-202ENST00000428634 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
PEX11B-202ENST00000428634 KIF27Q86VH2 1401 aa20.07■□□□□ 0.8
PEX11B-202ENST00000428634 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
PEX11B-202ENST00000428634 EEA1Q15075 1411 aa20.02■□□□□ 0.8
PEX11B-202ENST00000428634 WDR97A6NE52 1622 aa20.02■□□□□ 0.79
PEX11B-202ENST00000428634 ZNF608Q9ULD9 1512 aaPredicted RBP20■□□□□ 0.79
PEX11B-202ENST00000428634 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
PEX11B-202ENST00000428634 AQRO60306 1485 aaKnown RBP eCLIP19.98■□□□□ 0.79
PEX11B-202ENST00000428634 FAM9AQ8IZU1 332 aaPredicted RBP19.97■□□□□ 0.79
PEX11B-202ENST00000428634 RUSC2Q8N2Y8 1516 aa19.96■□□□□ 0.79
PEX11B-202ENST00000428634 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
PEX11B-202ENST00000428634 CSRNP3Q8WYN3 585 aa19.93■□□□□ 0.78
PEX11B-202ENST00000428634 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
PEX11B-202ENST00000428634 EIF4G3O43432 1585 aaKnown RBP19.92■□□□□ 0.78
PEX11B-202ENST00000428634 IGF1RP08069 1367 aa19.9■□□□□ 0.78
PEX11B-202ENST00000428634 ERICH3Q5RHP9 1530 aa19.89■□□□□ 0.77
PEX11B-202ENST00000428634 PBRM1Q86U86 1689 aa19.83■□□□□ 0.76
PEX11B-202ENST00000428634 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.76
PEX11B-202ENST00000428634 MAGI1Q96QZ7 1491 aaPredicted RBP19.81■□□□□ 0.76
PEX11B-202ENST00000428634 SNAPC4Q5SXM2 1469 aa19.8■□□□□ 0.76
PEX11B-202ENST00000428634 FHAD1B1AJZ9 1412 aa19.79■□□□□ 0.76
PEX11B-202ENST00000428634 CUL7Q14999 1698 aa19.78■□□□□ 0.76
PEX11B-202ENST00000428634 PRXQ9BXM0 1461 aa19.77■□□□□ 0.76
PEX11B-202ENST00000428634 RAPGEF2Q9Y4G8 1499 aa19.74■□□□□ 0.75
PEX11B-202ENST00000428634 CHMP7Q8WUX9 453 aaPredicted RBP19.74■□□□□ 0.75
PEX11B-202ENST00000428634 ADAMTS12P58397 1594 aa19.73■□□□□ 0.75
PEX11B-202ENST00000428634 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
PEX11B-202ENST00000428634 FBLN2P98095 1184 aa19.71■□□□□ 0.75
PEX11B-202ENST00000428634 KIF21BO75037 1637 aa19.7■□□□□ 0.74
PEX11B-202ENST00000428634 GOLGA3Q08378 1498 aa19.68■□□□□ 0.74
PEX11B-202ENST00000428634 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
PEX11B-202ENST00000428634 GRIN2AQ12879 1464 aa19.65■□□□□ 0.74
PEX11B-202ENST00000428634 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.73
PEX11B-202ENST00000428634 LOC105371045A0A1W2PR82 267 aa19.61■□□□□ 0.73
PEX11B-202ENST00000428634 CHD1O14646 1710 aa19.54■□□□□ 0.72
PEX11B-202ENST00000428634 NUP160Q12769 1436 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms