RNA–Protein interactions for RNA: ENST00000428595.1

UBAP2L-206, Transcript of ubiquitin associated protein 2 like, humanhuman

TSL 1 (best)

Gene UBAP2L, Length 1,419 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2L-206ENST00000428595 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
UBAP2L-206ENST00000428595 CCDC180Q9P1Z9 1646 aa25.69■■□□□ 1.7
UBAP2L-206ENST00000428595 ABCC9O60706 1549 aa25.47■■□□□ 1.67
UBAP2L-206ENST00000428595 RB1CC1Q8TDY2 1594 aa24.3■■□□□ 1.48
UBAP2L-206ENST00000428595 NACADO15069 1562 aa24.2■■□□□ 1.46
UBAP2L-206ENST00000428595 DCAF8L2P0C7V8 631 aa24.19■■□□□ 1.46
UBAP2L-206ENST00000428595 ZCCHC6Q5VYS8 1495 aaKnown RBP23.95■■□□□ 1.42
UBAP2L-206ENST00000428595 MYO15BQ96JP2 1530 aa23.93■■□□□ 1.42
UBAP2L-206ENST00000428595 UNC13AQ9UPW8 1703 aa23.89■■□□□ 1.41
UBAP2L-206ENST00000428595 PABPN1Q86U42 306 aaKnown RBP eCLIP23.77■■□□□ 1.4
UBAP2L-206ENST00000428595 DCAF1Q9Y4B6 1507 aa23.76■■□□□ 1.39
UBAP2L-206ENST00000428595 DNAJC5BQ9UF47 199 aa23.68■■□□□ 1.38
UBAP2L-206ENST00000428595 BICRAQ9NZM4 1560 aa23.68■■□□□ 1.38
UBAP2L-206ENST00000428595 SCRIBQ14160 1630 aa23.5■■□□□ 1.35
UBAP2L-206ENST00000428595 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
UBAP2L-206ENST00000428595 EIF4G1Q04637 1599 aaKnown RBP23.03■■□□□ 1.28
UBAP2L-206ENST00000428595 CC2D2AQ9P2K1 1620 aa23.02■■□□□ 1.28
UBAP2L-206ENST00000428595 CECR2Q9BXF3 1484 aa22.87■■□□□ 1.25
UBAP2L-206ENST00000428595 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
UBAP2L-206ENST00000428595 ATAD2BQ9ULI0 1458 aa22.36■■□□□ 1.17
UBAP2L-206ENST00000428595 NCAPD3P42695 1498 aa22.35■■□□□ 1.17
UBAP2L-206ENST00000428595 BAZ1AQ9NRL2 1556 aaPredicted RBP22.31■■□□□ 1.16
UBAP2L-206ENST00000428595 SMARCA2P51531 1590 aa22.27■■□□□ 1.15
UBAP2L-206ENST00000428595 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
UBAP2L-206ENST00000428595 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
UBAP2L-206ENST00000428595 PEG3Q9GZU2 1588 aa22.17■■□□□ 1.14
UBAP2L-206ENST00000428595 BAZ1BQ9UIG0 1483 aaKnown RBP22.14■■□□□ 1.13
UBAP2L-206ENST00000428595 WIZO95785 1651 aa22.01■■□□□ 1.11
UBAP2L-206ENST00000428595 NESP48681 1621 aa22■■□□□ 1.11
UBAP2L-206ENST00000428595 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
UBAP2L-206ENST00000428595 RSF1Q96T23 1441 aaPredicted RBP21.87■■□□□ 1.09
UBAP2L-206ENST00000428595 LAMC3Q9Y6N6 1575 aa21.79■■□□□ 1.08
UBAP2L-206ENST00000428595 CUX2O14529 1486 aa21.74■■□□□ 1.07
UBAP2L-206ENST00000428595 KIF21AQ7Z4S6 1674 aa21.72■■□□□ 1.07
UBAP2L-206ENST00000428595 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
UBAP2L-206ENST00000428595 TOP2AP11388 1531 aaKnown RBP21.69■■□□□ 1.06
UBAP2L-206ENST00000428595 THOC2Q8NI27 1593 aaKnown RBP21.69■■□□□ 1.06
UBAP2L-206ENST00000428595 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
UBAP2L-206ENST00000428595 CFTRP13569 1480 aa21.51■■□□□ 1.03
UBAP2L-206ENST00000428595 CCDC88BA6NC98 1476 aa21.47■■□□□ 1.03
UBAP2L-206ENST00000428595 MRC2Q9UBG0 1479 aa21.47■■□□□ 1.03
UBAP2L-206ENST00000428595 FANCD2Q9BXW9 1451 aa21.46■■□□□ 1.03
UBAP2L-206ENST00000428595 CEP164Q9UPV0 1460 aa21.44■■□□□ 1.02
UBAP2L-206ENST00000428595 DNAJC5Q9H3Z4 198 aa21.42■■□□□ 1.02
UBAP2L-206ENST00000428595 WDR62O43379 1518 aa21.42■■□□□ 1.02
UBAP2L-206ENST00000428595 PRDM2Q13029 1718 aa21.36■■□□□ 1.01
UBAP2L-206ENST00000428595 URB2Q14146 1524 aaKnown RBP21.3■■□□□ 1
UBAP2L-206ENST00000428595 SUPT5HO00267 1087 aaKnown RBP21.14■□□□□ 0.98
UBAP2L-206ENST00000428595 TOPBP1Q92547 1522 aa21.1■□□□□ 0.97
UBAP2L-206ENST00000428595 DNMBPQ6XZF7 1577 aa21.03■□□□□ 0.96
UBAP2L-206ENST00000428595 ZNF608Q9ULD9 1512 aaPredicted RBP21.01■□□□□ 0.95
UBAP2L-206ENST00000428595 IFT140Q96RY7 1462 aa20.98■□□□□ 0.95
UBAP2L-206ENST00000428595 ABCC8Q09428 1581 aa20.98■□□□□ 0.95
UBAP2L-206ENST00000428595 TARBP1Q13395 1621 aaKnown RBP20.92■□□□□ 0.94
UBAP2L-206ENST00000428595 POLA1P09884 1462 aaPredicted RBP20.91■□□□□ 0.94
UBAP2L-206ENST00000428595 CUX1P39880 1505 aa20.89■□□□□ 0.93
UBAP2L-206ENST00000428595 EIF4G3O43432 1585 aaKnown RBP20.88■□□□□ 0.93
UBAP2L-206ENST00000428595 RAD54L2Q9Y4B4 1467 aa20.86■□□□□ 0.93
UBAP2L-206ENST00000428595 AQRO60306 1485 aaKnown RBP eCLIP20.84■□□□□ 0.938e-7■■■■□ 23.5
UBAP2L-206ENST00000428595 FGD5Q6ZNL6 1462 aa20.82■□□□□ 0.92
UBAP2L-206ENST00000428595 OSCARQ8IYS5 282 aa20.79■□□□□ 0.92
UBAP2L-206ENST00000428595 SOGA1O94964 1423 aa20.79■□□□□ 0.92
UBAP2L-206ENST00000428595 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
UBAP2L-206ENST00000428595 CHD1O14646 1710 aa20.71■□□□□ 0.91
UBAP2L-206ENST00000428595 WDR97A6NE52 1622 aa20.69■□□□□ 0.9
UBAP2L-206ENST00000428595 TRIM41Q8WV44 630 aa20.64■□□□□ 0.89
UBAP2L-206ENST00000428595 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
UBAP2L-206ENST00000428595 SNAPC4Q5SXM2 1469 aa20.62■□□□□ 0.89
UBAP2L-206ENST00000428595 FBLN2P98095 1184 aa20.61■□□□□ 0.89
UBAP2L-206ENST00000428595 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
UBAP2L-206ENST00000428595 TOP2BQ02880 1626 aa20.59■□□□□ 0.89
UBAP2L-206ENST00000428595 WRNQ14191 1432 aaPredicted RBP eCLIP20.59■□□□□ 0.89
UBAP2L-206ENST00000428595 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.88
UBAP2L-206ENST00000428595 RIMBP3CA6NJZ7 1639 aa20.58■□□□□ 0.88
UBAP2L-206ENST00000428595 RIMBP3BA6NNM3 1639 aa20.58■□□□□ 0.88
UBAP2L-206ENST00000428595 RIMBP3Q9UFD9 1639 aa20.58■□□□□ 0.88
UBAP2L-206ENST00000428595 PBRM1Q86U86 1689 aa20.57■□□□□ 0.88
UBAP2L-206ENST00000428595 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
UBAP2L-206ENST00000428595 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
UBAP2L-206ENST00000428595 GAPVD1Q14C86 1478 aa20.55■□□□□ 0.88
UBAP2L-206ENST00000428595 MAGI1Q96QZ7 1491 aaPredicted RBP20.53■□□□□ 0.88
UBAP2L-206ENST00000428595 ARHGEF11O15085 1522 aa20.52■□□□□ 0.88
UBAP2L-206ENST00000428595 SYNJ2O15056 1496 aa20.46■□□□□ 0.87
UBAP2L-206ENST00000428595 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
UBAP2L-206ENST00000428595 CLASP1Q7Z460 1538 aa20.44■□□□□ 0.86
UBAP2L-206ENST00000428595 ADAMTS12P58397 1594 aa20.37■□□□□ 0.85
UBAP2L-206ENST00000428595 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
UBAP2L-206ENST00000428595 CYB5RLQ6IPT4 315 aa20.35■□□□□ 0.85
UBAP2L-206ENST00000428595 GRIN2AQ12879 1464 aa20.32■□□□□ 0.84
UBAP2L-206ENST00000428595 ERICH3Q5RHP9 1530 aa20.3■□□□□ 0.84
UBAP2L-206ENST00000428595 CEP170Q5SW79 1584 aa20.28■□□□□ 0.84
UBAP2L-206ENST00000428595 FHAD1B1AJZ9 1412 aa20.28■□□□□ 0.84
UBAP2L-206ENST00000428595 NUP160Q12769 1436 aa20.24■□□□□ 0.83
UBAP2L-206ENST00000428595 ERCC6L2Q5T890 1561 aa20.21■□□□□ 0.83
UBAP2L-206ENST00000428595 IGF1RP08069 1367 aa20.16■□□□□ 0.82
UBAP2L-206ENST00000428595 KIF27Q86VH2 1401 aa20.15■□□□□ 0.82
UBAP2L-206ENST00000428595 SHROOM2Q13796 1616 aa20.13■□□□□ 0.81
UBAP2L-206ENST00000428595 CUL7Q14999 1698 aa20.08■□□□□ 0.8
UBAP2L-206ENST00000428595 RUSC2Q8N2Y8 1516 aa20.08■□□□□ 0.8
UBAP2L-206ENST00000428595 PRG4Q92954 1404 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms