RNA–Protein interactions for RNA: ENST00000428430.1

ABLIM1-208, Transcript of actin binding LIM protein 1, humanhuman

TSL 3

Gene ABLIM1, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM1-208ENST00000428430 NISCHQ9Y2I1 1504 aa27.73■■■□□ 2.03
ABLIM1-208ENST00000428430 ABCC9O60706 1549 aa25.09■■□□□ 1.61
ABLIM1-208ENST00000428430 CCDC180Q9P1Z9 1646 aa25.04■■□□□ 1.6
ABLIM1-208ENST00000428430 RB1CC1Q8TDY2 1594 aa23.88■■□□□ 1.41
ABLIM1-208ENST00000428430 NACADO15069 1562 aa23.69■■□□□ 1.38
ABLIM1-208ENST00000428430 DNAJC5BQ9UF47 199 aa23.63■■□□□ 1.37
ABLIM1-208ENST00000428430 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
ABLIM1-208ENST00000428430 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.33
ABLIM1-208ENST00000428430 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.32
ABLIM1-208ENST00000428430 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
ABLIM1-208ENST00000428430 BICRAQ9NZM4 1560 aa23.17■■□□□ 1.3
ABLIM1-208ENST00000428430 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
ABLIM1-208ENST00000428430 DCAF1Q9Y4B6 1507 aa22.95■■□□□ 1.26
ABLIM1-208ENST00000428430 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
ABLIM1-208ENST00000428430 SCRIBQ14160 1630 aa22.73■■□□□ 1.23
ABLIM1-208ENST00000428430 CC2D2AQ9P2K1 1620 aa22.69■■□□□ 1.22
ABLIM1-208ENST00000428430 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
ABLIM1-208ENST00000428430 EIF4G1Q04637 1599 aaKnown RBP22.62■■□□□ 1.21
ABLIM1-208ENST00000428430 DNAJC5Q9H3Z4 198 aa21.87■■□□□ 1.09
ABLIM1-208ENST00000428430 NCAPD3P42695 1498 aa21.83■■□□□ 1.09
ABLIM1-208ENST00000428430 CUX2O14529 1486 aa21.77■■□□□ 1.08
ABLIM1-208ENST00000428430 ATAD2BQ9ULI0 1458 aa21.73■■□□□ 1.07
ABLIM1-208ENST00000428430 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
ABLIM1-208ENST00000428430 SMARCA2P51531 1590 aa21.71■■□□□ 1.07
ABLIM1-208ENST00000428430 HMGXB3Q12766 1538 aa21.7■■□□□ 1.06
ABLIM1-208ENST00000428430 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
ABLIM1-208ENST00000428430 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
ABLIM1-208ENST00000428430 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.04
ABLIM1-208ENST00000428430 PEG3Q9GZU2 1588 aa21.51■■□□□ 1.03
ABLIM1-208ENST00000428430 NESP48681 1621 aa21.5■■□□□ 1.03
ABLIM1-208ENST00000428430 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
ABLIM1-208ENST00000428430 THOC2Q8NI27 1593 aaKnown RBP21.39■■□□□ 1.01
ABLIM1-208ENST00000428430 MROH2BQ7Z745 1585 aa21.35■■□□□ 1.01
ABLIM1-208ENST00000428430 KIF21AQ7Z4S6 1674 aa21.28■■□□□ 1
ABLIM1-208ENST00000428430 PDS5BQ9NTI5 1447 aa21.25■□□□□ 0.99
ABLIM1-208ENST00000428430 CADPSQ9ULU8 1353 aa21.14■□□□□ 0.98
ABLIM1-208ENST00000428430 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
ABLIM1-208ENST00000428430 WIZO95785 1651 aa21.09■□□□□ 0.97
ABLIM1-208ENST00000428430 WDR62O43379 1518 aa21.06■□□□□ 0.96
ABLIM1-208ENST00000428430 CEP164Q9UPV0 1460 aa20.97■□□□□ 0.95
ABLIM1-208ENST00000428430 FANCD2Q9BXW9 1451 aa20.92■□□□□ 0.94
ABLIM1-208ENST00000428430 CFTRP13569 1480 aa20.88■□□□□ 0.93
ABLIM1-208ENST00000428430 TOP2AP11388 1531 aaKnown RBP20.85■□□□□ 0.93
ABLIM1-208ENST00000428430 RSF1Q96T23 1441 aaPredicted RBP20.84■□□□□ 0.93
ABLIM1-208ENST00000428430 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
ABLIM1-208ENST00000428430 URB2Q14146 1524 aaKnown RBP20.75■□□□□ 0.91
ABLIM1-208ENST00000428430 PRDM2Q13029 1718 aa20.73■□□□□ 0.91
ABLIM1-208ENST00000428430 OSCARQ8IYS5 282 aa20.67■□□□□ 0.9
ABLIM1-208ENST00000428430 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
ABLIM1-208ENST00000428430 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
ABLIM1-208ENST00000428430 TOPBP1Q92547 1522 aa20.5■□□□□ 0.87
ABLIM1-208ENST00000428430 ZNF608Q9ULD9 1512 aaPredicted RBP20.5■□□□□ 0.87
ABLIM1-208ENST00000428430 ABCC8Q09428 1581 aa20.48■□□□□ 0.87
ABLIM1-208ENST00000428430 RIMBP3CA6NJZ7 1639 aa20.47■□□□□ 0.87
ABLIM1-208ENST00000428430 RIMBP3BA6NNM3 1639 aa20.47■□□□□ 0.87
ABLIM1-208ENST00000428430 RIMBP3Q9UFD9 1639 aa20.47■□□□□ 0.87
ABLIM1-208ENST00000428430 EIF4G3O43432 1585 aaKnown RBP20.43■□□□□ 0.86
ABLIM1-208ENST00000428430 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
ABLIM1-208ENST00000428430 ARHGEF11O15085 1522 aa20.39■□□□□ 0.85
ABLIM1-208ENST00000428430 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
ABLIM1-208ENST00000428430 CHD1O14646 1710 aa20.31■□□□□ 0.84
ABLIM1-208ENST00000428430 POLA1P09884 1462 aaPredicted RBP20.28■□□□□ 0.84
ABLIM1-208ENST00000428430 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.843e-6■□□□□ 9.2
ABLIM1-208ENST00000428430 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
ABLIM1-208ENST00000428430 CYB5RLQ6IPT4 315 aa20.17■□□□□ 0.82
ABLIM1-208ENST00000428430 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
ABLIM1-208ENST00000428430 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
ABLIM1-208ENST00000428430 SOGA1O94964 1423 aa20.16■□□□□ 0.82
ABLIM1-208ENST00000428430 FBLN2P98095 1184 aa20.15■□□□□ 0.82
ABLIM1-208ENST00000428430 FGD5Q6ZNL6 1462 aa20.12■□□□□ 0.81
ABLIM1-208ENST00000428430 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
ABLIM1-208ENST00000428430 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
ABLIM1-208ENST00000428430 CUX1P39880 1505 aa20.08■□□□□ 0.81
ABLIM1-208ENST00000428430 MAGI1Q96QZ7 1491 aaPredicted RBP20.08■□□□□ 0.81
ABLIM1-208ENST00000428430 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
ABLIM1-208ENST00000428430 SYNJ1O43426 1573 aa20.06■□□□□ 0.8
ABLIM1-208ENST00000428430 GRIN2BQ13224 1484 aa20.04■□□□□ 0.8
ABLIM1-208ENST00000428430 TRHP20396 242 aaPredicted RBP20.01■□□□□ 0.79
ABLIM1-208ENST00000428430 SYNJ2O15056 1496 aa20■□□□□ 0.79
ABLIM1-208ENST00000428430 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
ABLIM1-208ENST00000428430 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
ABLIM1-208ENST00000428430 GAPVD1Q14C86 1478 aa19.93■□□□□ 0.78
ABLIM1-208ENST00000428430 ABCA10Q8WWZ4 1543 aa19.91■□□□□ 0.78
ABLIM1-208ENST00000428430 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
ABLIM1-208ENST00000428430 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
ABLIM1-208ENST00000428430 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
ABLIM1-208ENST00000428430 ADAMTS12P58397 1594 aa19.77■□□□□ 0.76
ABLIM1-208ENST00000428430 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
ABLIM1-208ENST00000428430 TOP2BQ02880 1626 aa19.73■□□□□ 0.75
ABLIM1-208ENST00000428430 NUP160Q12769 1436 aa19.73■□□□□ 0.75
ABLIM1-208ENST00000428430 CEP170Q5SW79 1584 aa19.72■□□□□ 0.75
ABLIM1-208ENST00000428430 SUPT5HO00267 1087 aaKnown RBP19.71■□□□□ 0.75
ABLIM1-208ENST00000428430 ERCC6L2Q5T890 1561 aa19.7■□□□□ 0.74
ABLIM1-208ENST00000428430 SHROOM2Q13796 1616 aa19.69■□□□□ 0.74
ABLIM1-208ENST00000428430 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
ABLIM1-208ENST00000428430 ERICH3Q5RHP9 1530 aa19.67■□□□□ 0.74
ABLIM1-208ENST00000428430 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
ABLIM1-208ENST00000428430 PRG4Q92954 1404 aaPredicted RBP19.52■□□□□ 0.72
ABLIM1-208ENST00000428430 KIF13AQ9H1H9 1805 aa19.5■□□□□ 0.71
ABLIM1-208ENST00000428430 RUSC2Q8N2Y8 1516 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms