RNA–Protein interactions for RNA: ENST00000427990.5

APOL1-207, Transcript of apolipoprotein L1, humanhuman

TSL 3

Gene APOL1, Length 624 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL1-207ENST00000427990 NISCHQ9Y2I1 1504 aa27.93■■■□□ 2.06
APOL1-207ENST00000427990 CCDC180Q9P1Z9 1646 aa24.8■■□□□ 1.56
APOL1-207ENST00000427990 ABCC9O60706 1549 aa24.15■■□□□ 1.46
APOL1-207ENST00000427990 NACADO15069 1562 aa23.33■■□□□ 1.33
APOL1-207ENST00000427990 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
APOL1-207ENST00000427990 ZCCHC6Q5VYS8 1495 aaKnown RBP23.29■■□□□ 1.32
APOL1-207ENST00000427990 MYO15BQ96JP2 1530 aa23.27■■□□□ 1.32
APOL1-207ENST00000427990 DCAF8L2P0C7V8 631 aa23.24■■□□□ 1.31
APOL1-207ENST00000427990 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
APOL1-207ENST00000427990 UNC13AQ9UPW8 1703 aa22.68■■□□□ 1.22
APOL1-207ENST00000427990 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
APOL1-207ENST00000427990 PABPN1Q86U42 306 aaKnown RBP eCLIP22.57■■□□□ 1.2
APOL1-207ENST00000427990 BICRAQ9NZM4 1560 aa22.56■■□□□ 1.2
APOL1-207ENST00000427990 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
APOL1-207ENST00000427990 DNAJC5BQ9UF47 199 aa22.08■■□□□ 1.13
APOL1-207ENST00000427990 EIF4G1Q04637 1599 aaKnown RBP21.98■■□□□ 1.11
APOL1-207ENST00000427990 CC2D2AQ9P2K1 1620 aa21.85■■□□□ 1.09
APOL1-207ENST00000427990 CECR2Q9BXF3 1484 aa21.73■■□□□ 1.07
APOL1-207ENST00000427990 BAZ1AQ9NRL2 1556 aaPredicted RBP21.66■■□□□ 1.06
APOL1-207ENST00000427990 SMARCA4P51532 1647 aa21.63■■□□□ 1.05
APOL1-207ENST00000427990 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
APOL1-207ENST00000427990 NCAPD3P42695 1498 aa21.53■■□□□ 1.04
APOL1-207ENST00000427990 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.04
APOL1-207ENST00000427990 MROH2BQ7Z745 1585 aa21.48■■□□□ 1.03
APOL1-207ENST00000427990 PEG3Q9GZU2 1588 aa21.47■■□□□ 1.03
APOL1-207ENST00000427990 HMGXB3Q12766 1538 aa21.43■■□□□ 1.02
APOL1-207ENST00000427990 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
APOL1-207ENST00000427990 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
APOL1-207ENST00000427990 WIZO95785 1651 aa21.23■□□□□ 0.99
APOL1-207ENST00000427990 TOP2AP11388 1531 aaKnown RBP21.07■□□□□ 0.96
APOL1-207ENST00000427990 LAMC3Q9Y6N6 1575 aa20.93■□□□□ 0.94
APOL1-207ENST00000427990 NESP48681 1621 aa20.9■□□□□ 0.94
APOL1-207ENST00000427990 CADPSQ9ULU8 1353 aa20.9■□□□□ 0.94
APOL1-207ENST00000427990 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
APOL1-207ENST00000427990 PDS5BQ9NTI5 1447 aa20.82■□□□□ 0.92
APOL1-207ENST00000427990 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
APOL1-207ENST00000427990 CFTRP13569 1480 aa20.79■□□□□ 0.92
APOL1-207ENST00000427990 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
APOL1-207ENST00000427990 CUX2O14529 1486 aa20.65■□□□□ 0.9
APOL1-207ENST00000427990 FANCD2Q9BXW9 1451 aa20.64■□□□□ 0.89
APOL1-207ENST00000427990 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.89
APOL1-207ENST00000427990 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
APOL1-207ENST00000427990 THOC2Q8NI27 1593 aaKnown RBP20.59■□□□□ 0.89
APOL1-207ENST00000427990 MRC2Q9UBG0 1479 aa20.57■□□□□ 0.88
APOL1-207ENST00000427990 PRDM2Q13029 1718 aa20.57■□□□□ 0.88
APOL1-207ENST00000427990 WDR62O43379 1518 aa20.49■□□□□ 0.87
APOL1-207ENST00000427990 URB2Q14146 1524 aaKnown RBP20.41■□□□□ 0.86
APOL1-207ENST00000427990 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
APOL1-207ENST00000427990 TOPBP1Q92547 1522 aa20.31■□□□□ 0.84
APOL1-207ENST00000427990 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
APOL1-207ENST00000427990 IFT140Q96RY7 1462 aa20.19■□□□□ 0.82
APOL1-207ENST00000427990 CUX1P39880 1505 aa20.17■□□□□ 0.82
APOL1-207ENST00000427990 POLA1P09884 1462 aaPredicted RBP20.14■□□□□ 0.81
APOL1-207ENST00000427990 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
APOL1-207ENST00000427990 FGD5Q6ZNL6 1462 aa20.09■□□□□ 0.81
APOL1-207ENST00000427990 SOGA1O94964 1423 aa20.07■□□□□ 0.8
APOL1-207ENST00000427990 TARBP1Q13395 1621 aaKnown RBP20.06■□□□□ 0.8
APOL1-207ENST00000427990 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
APOL1-207ENST00000427990 TOP2BQ02880 1626 aa20.03■□□□□ 0.8
APOL1-207ENST00000427990 RAD54L2Q9Y4B4 1467 aa20.02■□□□□ 0.8
APOL1-207ENST00000427990 BIVM-ERCC5R4GMW8 1640 aa20.01■□□□□ 0.79
APOL1-207ENST00000427990 WDR97A6NE52 1622 aa19.99■□□□□ 0.79
APOL1-207ENST00000427990 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
APOL1-207ENST00000427990 EIF4G3O43432 1585 aaKnown RBP19.96■□□□□ 0.79
APOL1-207ENST00000427990 ABCA10Q8WWZ4 1543 aa19.94■□□□□ 0.78
APOL1-207ENST00000427990 AQRO60306 1485 aaKnown RBP eCLIP19.93■□□□□ 0.783e-6■■■□□ 17
APOL1-207ENST00000427990 TDRD9Q8NDG6 1382 aaKnown RBP19.92■□□□□ 0.78
APOL1-207ENST00000427990 DNAJC5Q9H3Z4 198 aa19.91■□□□□ 0.78
APOL1-207ENST00000427990 GRIN2BQ13224 1484 aa19.85■□□□□ 0.77
APOL1-207ENST00000427990 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
APOL1-207ENST00000427990 ABCA5Q8WWZ7 1642 aa19.81■□□□□ 0.76
APOL1-207ENST00000427990 MAGI1Q96QZ7 1491 aaPredicted RBP19.8■□□□□ 0.76
APOL1-207ENST00000427990 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
APOL1-207ENST00000427990 SNAPC4Q5SXM2 1469 aa19.77■□□□□ 0.76
APOL1-207ENST00000427990 PBRM1Q86U86 1689 aa19.73■□□□□ 0.75
APOL1-207ENST00000427990 SYNJ2O15056 1496 aa19.71■□□□□ 0.75
APOL1-207ENST00000427990 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
APOL1-207ENST00000427990 KIF27Q86VH2 1401 aa19.69■□□□□ 0.74
APOL1-207ENST00000427990 FBLN2P98095 1184 aa19.69■□□□□ 0.74
APOL1-207ENST00000427990 CHMP7Q8WUX9 453 aaPredicted RBP19.69■□□□□ 0.74
APOL1-207ENST00000427990 CHD1O14646 1710 aa19.66■□□□□ 0.74
APOL1-207ENST00000427990 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
APOL1-207ENST00000427990 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.73
APOL1-207ENST00000427990 ADAMTS12P58397 1594 aa19.62■□□□□ 0.73
APOL1-207ENST00000427990 IGF1RP08069 1367 aa19.58■□□□□ 0.73
APOL1-207ENST00000427990 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
APOL1-207ENST00000427990 CUL7Q14999 1698 aa19.52■□□□□ 0.72
APOL1-207ENST00000427990 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
APOL1-207ENST00000427990 NUP160Q12769 1436 aa19.51■□□□□ 0.71
APOL1-207ENST00000427990 CARMIL1Q5VZK9 1371 aa19.47■□□□□ 0.71
APOL1-207ENST00000427990 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
APOL1-207ENST00000427990 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
APOL1-207ENST00000427990 ARHGEF11O15085 1522 aa19.43■□□□□ 0.7
APOL1-207ENST00000427990 RUSC2Q8N2Y8 1516 aa19.43■□□□□ 0.7
APOL1-207ENST00000427990 EEA1Q15075 1411 aa19.4■□□□□ 0.7
APOL1-207ENST00000427990 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
APOL1-207ENST00000427990 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
APOL1-207ENST00000427990 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
APOL1-207ENST00000427990 RAPGEF2Q9Y4G8 1499 aa19.36■□□□□ 0.69
APOL1-207ENST00000427990 KIAA0586Q9BVV6 1533 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms