RNA–Protein interactions for RNA: ENST00000427834.5

SGSM3-203, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-203ENST00000427834 NISCHQ9Y2I1 1504 aa45.84■■■■■ 4.93
SGSM3-203ENST00000427834 CCDC180Q9P1Z9 1646 aa40.45■■■■■ 4.07
SGSM3-203ENST00000427834 ABCC9O60706 1549 aa39.03■■■■□ 3.84
SGSM3-203ENST00000427834 ZCCHC6Q5VYS8 1495 aaKnown RBP38.33■■■■□ 3.73
SGSM3-203ENST00000427834 DCAF8L2P0C7V8 631 aa38.2■■■■□ 3.71
SGSM3-203ENST00000427834 DCAF1Q9Y4B6 1507 aa37.89■■■■□ 3.66
SGSM3-203ENST00000427834 NACADO15069 1562 aa37.85■■■■□ 3.65
SGSM3-203ENST00000427834 RB1CC1Q8TDY2 1594 aa37.77■■■■□ 3.64
SGSM3-203ENST00000427834 MYO15BQ96JP2 1530 aa37.76■■■■□ 3.63
SGSM3-203ENST00000427834 SCRIBQ14160 1630 aa37.09■■■■□ 3.53
SGSM3-203ENST00000427834 UNC13AQ9UPW8 1703 aa36.97■■■■□ 3.51
SGSM3-203ENST00000427834 SHROOM4Q9ULL8 1493 aa36.82■■■■□ 3.48
SGSM3-203ENST00000427834 PABPN1Q86U42 306 aaKnown RBP eCLIP36.61■■■■□ 3.45
SGSM3-203ENST00000427834 BICRAQ9NZM4 1560 aa36.59■■■■□ 3.45
SGSM3-203ENST00000427834 CECR2Q9BXF3 1484 aa35.68■■■■□ 3.3
SGSM3-203ENST00000427834 EIF4G1Q04637 1599 aaKnown RBP35.59■■■■□ 3.29
SGSM3-203ENST00000427834 BAZ1AQ9NRL2 1556 aaPredicted RBP35.5■■■■□ 3.27
SGSM3-203ENST00000427834 SMARCA4P51532 1647 aa35.46■■■■□ 3.27
SGSM3-203ENST00000427834 MROH2BQ7Z745 1585 aa35.38■■■■□ 3.25
SGSM3-203ENST00000427834 CC2D2AQ9P2K1 1620 aa35.3■■■■□ 3.24
SGSM3-203ENST00000427834 RSF1Q96T23 1441 aaPredicted RBP35.2■■■■□ 3.23
SGSM3-203ENST00000427834 DNAJC5BQ9UF47 199 aa35.14■■■■□ 3.22
SGSM3-203ENST00000427834 WIZO95785 1651 aa35.08■■■■□ 3.21
SGSM3-203ENST00000427834 ATAD2BQ9ULI0 1458 aa35.06■■■■□ 3.2
SGSM3-203ENST00000427834 SMARCA2P51531 1590 aa35.05■■■■□ 3.2
SGSM3-203ENST00000427834 PEG3Q9GZU2 1588 aa35.01■■■■□ 3.2
SGSM3-203ENST00000427834 SUPT5HO00267 1087 aaKnown RBP34.96■■■■□ 3.19
SGSM3-203ENST00000427834 NCAPD3P42695 1498 aa34.89■■■■□ 3.18
SGSM3-203ENST00000427834 BAZ1BQ9UIG0 1483 aaKnown RBP34.86■■■■□ 3.17
SGSM3-203ENST00000427834 HMGXB3Q12766 1538 aa34.81■■■■□ 3.16
SGSM3-203ENST00000427834 TOP2AP11388 1531 aaKnown RBP34.69■■■■□ 3.14
SGSM3-203ENST00000427834 CCDC88BA6NC98 1476 aa34.29■■■■□ 3.08
SGSM3-203ENST00000427834 NESP48681 1621 aa33.97■■■■□ 3.03
SGSM3-203ENST00000427834 CADPSQ9ULU8 1353 aa33.96■■■■□ 3.03
SGSM3-203ENST00000427834 LAMC3Q9Y6N6 1575 aa33.91■■■■□ 3.02
SGSM3-203ENST00000427834 CFTRP13569 1480 aa33.88■■■■□ 3.01
SGSM3-203ENST00000427834 PRDM2Q13029 1718 aa33.74■■■□□ 2.99
SGSM3-203ENST00000427834 PDS5BQ9NTI5 1447 aa33.67■■■□□ 2.98
SGSM3-203ENST00000427834 FANCD2Q9BXW9 1451 aa33.61■■■□□ 2.97
SGSM3-203ENST00000427834 ERCC6Q03468 1493 aa33.6■■■□□ 2.97
SGSM3-203ENST00000427834 KIF21AQ7Z4S6 1674 aa33.6■■■□□ 2.97
SGSM3-203ENST00000427834 CEP164Q9UPV0 1460 aa33.5■■■□□ 2.95
SGSM3-203ENST00000427834 ABCC8Q09428 1581 aa33.31■■■□□ 2.92
SGSM3-203ENST00000427834 MRC2Q9UBG0 1479 aa33.3■■■□□ 2.92
SGSM3-203ENST00000427834 THOC2Q8NI27 1593 aaKnown RBP33.26■■■□□ 2.92
SGSM3-203ENST00000427834 URB2Q14146 1524 aaKnown RBP33.23■■■□□ 2.91
SGSM3-203ENST00000427834 WRNQ14191 1432 aaPredicted RBP eCLIP33.19■■■□□ 2.9
SGSM3-203ENST00000427834 CUX1P39880 1505 aa33.16■■■□□ 2.9
SGSM3-203ENST00000427834 DNMBPQ6XZF7 1577 aa33.16■■■□□ 2.9
SGSM3-203ENST00000427834 WDR62O43379 1518 aa33.14■■■□□ 2.9
SGSM3-203ENST00000427834 TOPBP1Q92547 1522 aa33.14■■■□□ 2.9
SGSM3-203ENST00000427834 SYNJ1O43426 1573 aa33.11■■■□□ 2.89
SGSM3-203ENST00000427834 TOP2BQ02880 1626 aa33.04■■■□□ 2.88
SGSM3-203ENST00000427834 BIVM-ERCC5R4GMW8 1640 aa33.03■■■□□ 2.88
SGSM3-203ENST00000427834 FGD5Q6ZNL6 1462 aa32.94■■■□□ 2.86
SGSM3-203ENST00000427834 CHIC1Q5VXU3 224 aa32.94■■■□□ 2.86
SGSM3-203ENST00000427834 TRIM41Q8WV44 630 aa32.93■■■□□ 2.86
SGSM3-203ENST00000427834 POLA1P09884 1462 aaPredicted RBP32.9■■■□□ 2.86
SGSM3-203ENST00000427834 CUX2O14529 1486 aa32.88■■■□□ 2.85
SGSM3-203ENST00000427834 RAD54L2Q9Y4B4 1467 aa32.8■■■□□ 2.84
SGSM3-203ENST00000427834 SOGA1O94964 1423 aa32.78■■■□□ 2.84
SGSM3-203ENST00000427834 IFT140Q96RY7 1462 aa32.74■■■□□ 2.83
SGSM3-203ENST00000427834 TARBP1Q13395 1621 aaKnown RBP32.71■■■□□ 2.83
SGSM3-203ENST00000427834 WDR97A6NE52 1622 aa32.62■■■□□ 2.81
SGSM3-203ENST00000427834 ABCA10Q8WWZ4 1543 aa32.61■■■□□ 2.81
SGSM3-203ENST00000427834 ZNF608Q9ULD9 1512 aaPredicted RBP32.58■■■□□ 2.81
SGSM3-203ENST00000427834 TDRD9Q8NDG6 1382 aaKnown RBP32.55■■■□□ 2.8
SGSM3-203ENST00000427834 EIF4G3O43432 1585 aaKnown RBP32.49■■■□□ 2.79
SGSM3-203ENST00000427834 AQRO60306 1485 aaKnown RBP eCLIP32.48■■■□□ 2.795e-7■■■□□ 18.3
SGSM3-203ENST00000427834 ABCA5Q8WWZ7 1642 aa32.44■■■□□ 2.78
SGSM3-203ENST00000427834 KIF27Q86VH2 1401 aa32.43■■■□□ 2.78
SGSM3-203ENST00000427834 GAPVD1Q14C86 1478 aa32.42■■■□□ 2.78
SGSM3-203ENST00000427834 RUSC2Q8N2Y8 1516 aa32.41■■■□□ 2.78
SGSM3-203ENST00000427834 PBRM1Q86U86 1689 aa32.36■■■□□ 2.77
SGSM3-203ENST00000427834 FAM9AQ8IZU1 332 aaPredicted RBP32.33■■■□□ 2.77
SGSM3-203ENST00000427834 GRIN2BQ13224 1484 aa32.31■■■□□ 2.76
SGSM3-203ENST00000427834 ERICH3Q5RHP9 1530 aa32.24■■■□□ 2.75
SGSM3-203ENST00000427834 EEA1Q15075 1411 aa32.24■■■□□ 2.75
SGSM3-203ENST00000427834 SNAPC4Q5SXM2 1469 aa32.22■■■□□ 2.75
SGSM3-203ENST00000427834 IGF1RP08069 1367 aa32.19■■■□□ 2.74
SGSM3-203ENST00000427834 CSRNP3Q8WYN3 585 aa32.13■■■□□ 2.73
SGSM3-203ENST00000427834 MAGI1Q96QZ7 1491 aaPredicted RBP32.13■■■□□ 2.73
SGSM3-203ENST00000427834 CUL7Q14999 1698 aa32.11■■■□□ 2.73
SGSM3-203ENST00000427834 ADAMTS12P58397 1594 aa32.11■■■□□ 2.73
SGSM3-203ENST00000427834 FHAD1B1AJZ9 1412 aa32.05■■■□□ 2.72
SGSM3-203ENST00000427834 CARMIL1Q5VZK9 1371 aa32.05■■■□□ 2.72
SGSM3-203ENST00000427834 FBLN2P98095 1184 aa32.04■■■□□ 2.72
SGSM3-203ENST00000427834 SYNJ2O15056 1496 aa32.02■■■□□ 2.72
SGSM3-203ENST00000427834 CHMP7Q8WUX9 453 aaPredicted RBP32■■■□□ 2.71
SGSM3-203ENST00000427834 CHD1O14646 1710 aa31.98■■■□□ 2.71
SGSM3-203ENST00000427834 PRXQ9BXM0 1461 aa31.95■■■□□ 2.7
SGSM3-203ENST00000427834 EHMT2Q96KQ7 1210 aa31.94■■■□□ 2.7
SGSM3-203ENST00000427834 RAPGEF2Q9Y4G8 1499 aa31.94■■■□□ 2.7
SGSM3-203ENST00000427834 GRIN2AQ12879 1464 aa31.9■■■□□ 2.7
SGSM3-203ENST00000427834 KIF21BO75037 1637 aa31.89■■■□□ 2.7
SGSM3-203ENST00000427834 GOLGA3Q08378 1498 aa31.78■■■□□ 2.68
SGSM3-203ENST00000427834 CEP170Q5SW79 1584 aa31.73■■■□□ 2.67
SGSM3-203ENST00000427834 UBTFP17480 764 aaKnown RBP31.7■■■□□ 2.67
SGSM3-203ENST00000427834 NUP160Q12769 1436 aa31.69■■■□□ 2.66
SGSM3-203ENST00000427834 OSCARQ8IYS5 282 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms