RNA–Protein interactions for RNA: ENST00000427737.5

TUBA4A-205, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-205ENST00000427737 NISCHQ9Y2I1 1504 aa30.96■■■□□ 2.55
TUBA4A-205ENST00000427737 CCDC180Q9P1Z9 1646 aa27.68■■■□□ 2.02
TUBA4A-205ENST00000427737 ABCC9O60706 1549 aa27.61■■■□□ 2.01
TUBA4A-205ENST00000427737 RB1CC1Q8TDY2 1594 aa26.22■■□□□ 1.79
TUBA4A-205ENST00000427737 DNAJC5BQ9UF47 199 aa26.16■■□□□ 1.78
TUBA4A-205ENST00000427737 NACADO15069 1562 aa26.09■■□□□ 1.77
TUBA4A-205ENST00000427737 DCAF8L2P0C7V8 631 aa25.99■■□□□ 1.75
TUBA4A-205ENST00000427737 MYO15BQ96JP2 1530 aa25.82■■□□□ 1.72
TUBA4A-205ENST00000427737 ZCCHC6Q5VYS8 1495 aaKnown RBP25.74■■□□□ 1.71
TUBA4A-205ENST00000427737 UNC13AQ9UPW8 1703 aa25.64■■□□□ 1.7
TUBA4A-205ENST00000427737 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.69
TUBA4A-205ENST00000427737 PABPN1Q86U42 306 aaKnown RBP eCLIP25.57■■□□□ 1.68
TUBA4A-205ENST00000427737 BICRAQ9NZM4 1560 aa25.47■■□□□ 1.67
TUBA4A-205ENST00000427737 SCRIBQ14160 1630 aa25.26■■□□□ 1.63
TUBA4A-205ENST00000427737 SHROOM4Q9ULL8 1493 aa25.2■■□□□ 1.62
TUBA4A-205ENST00000427737 CC2D2AQ9P2K1 1620 aa24.98■■□□□ 1.59
TUBA4A-205ENST00000427737 CECR2Q9BXF3 1484 aa24.95■■□□□ 1.58
TUBA4A-205ENST00000427737 EIF4G1Q04637 1599 aaKnown RBP24.86■■□□□ 1.57
TUBA4A-205ENST00000427737 DNAJC5Q9H3Z4 198 aa24.33■■□□□ 1.49
TUBA4A-205ENST00000427737 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
TUBA4A-205ENST00000427737 NCAPD3P42695 1498 aa24.08■■□□□ 1.45
TUBA4A-205ENST00000427737 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
TUBA4A-205ENST00000427737 CUX2O14529 1486 aa24.04■■□□□ 1.44
TUBA4A-205ENST00000427737 BAZ1AQ9NRL2 1556 aaPredicted RBP24.02■■□□□ 1.44
TUBA4A-205ENST00000427737 SMARCA2P51531 1590 aa24■■□□□ 1.43
TUBA4A-205ENST00000427737 HMGXB3Q12766 1538 aa23.95■■□□□ 1.43
TUBA4A-205ENST00000427737 ERCC6Q03468 1493 aa23.88■■□□□ 1.41
TUBA4A-205ENST00000427737 MROH2BQ7Z745 1585 aa23.87■■□□□ 1.41
TUBA4A-205ENST00000427737 PEG3Q9GZU2 1588 aa23.87■■□□□ 1.41
TUBA4A-205ENST00000427737 BAZ1BQ9UIG0 1483 aaKnown RBP23.85■■□□□ 1.41
TUBA4A-205ENST00000427737 NESP48681 1621 aa23.65■■□□□ 1.38
TUBA4A-205ENST00000427737 WIZO95785 1651 aa23.6■■□□□ 1.37
TUBA4A-205ENST00000427737 THOC2Q8NI27 1593 aaKnown RBP23.56■■□□□ 1.36
TUBA4A-205ENST00000427737 LAMC3Q9Y6N6 1575 aa23.51■■□□□ 1.35
TUBA4A-205ENST00000427737 RSF1Q96T23 1441 aaPredicted RBP23.47■■□□□ 1.35
TUBA4A-205ENST00000427737 KIF21AQ7Z4S6 1674 aa23.36■■□□□ 1.33
TUBA4A-205ENST00000427737 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
TUBA4A-205ENST00000427737 PDS5BQ9NTI5 1447 aa23.34■■□□□ 1.33
TUBA4A-205ENST00000427737 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
TUBA4A-205ENST00000427737 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
TUBA4A-205ENST00000427737 WDR62O43379 1518 aa23.16■■□□□ 1.3
TUBA4A-205ENST00000427737 CFTRP13569 1480 aa23.16■■□□□ 1.3
TUBA4A-205ENST00000427737 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
TUBA4A-205ENST00000427737 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
TUBA4A-205ENST00000427737 CCDC88BA6NC98 1476 aa23.04■■□□□ 1.28
TUBA4A-205ENST00000427737 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
TUBA4A-205ENST00000427737 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
TUBA4A-205ENST00000427737 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
TUBA4A-205ENST00000427737 OSCARQ8IYS5 282 aa22.75■■□□□ 1.23
TUBA4A-205ENST00000427737 TOPBP1Q92547 1522 aa22.71■■□□□ 1.23
TUBA4A-205ENST00000427737 DNMBPQ6XZF7 1577 aa22.65■■□□□ 1.22
TUBA4A-205ENST00000427737 ABCC8Q09428 1581 aa22.64■■□□□ 1.22
TUBA4A-205ENST00000427737 IFT140Q96RY7 1462 aa22.63■■□□□ 1.21
TUBA4A-205ENST00000427737 SUPT5HO00267 1087 aaKnown RBP22.6■■□□□ 1.21
TUBA4A-205ENST00000427737 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
TUBA4A-205ENST00000427737 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
TUBA4A-205ENST00000427737 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
TUBA4A-205ENST00000427737 ZNF608Q9ULD9 1512 aaPredicted RBP22.58■■□□□ 1.21
TUBA4A-205ENST00000427737 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
TUBA4A-205ENST00000427737 POLA1P09884 1462 aaPredicted RBP22.49■■□□□ 1.19
TUBA4A-205ENST00000427737 ARHGEF11O15085 1522 aa22.49■■□□□ 1.19
TUBA4A-205ENST00000427737 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
TUBA4A-205ENST00000427737 CUX1P39880 1505 aa22.42■■□□□ 1.18
TUBA4A-205ENST00000427737 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.18
TUBA4A-205ENST00000427737 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
TUBA4A-205ENST00000427737 FGD5Q6ZNL6 1462 aa22.4■■□□□ 1.18
TUBA4A-205ENST00000427737 SOGA1O94964 1423 aa22.37■■□□□ 1.17
TUBA4A-205ENST00000427737 CHD1O14646 1710 aa22.31■■□□□ 1.16
TUBA4A-205ENST00000427737 TDRD9Q8NDG6 1382 aaKnown RBP22.3■■□□□ 1.16
TUBA4A-205ENST00000427737 WDR97A6NE52 1622 aa22.26■■□□□ 1.15
TUBA4A-205ENST00000427737 ARAP1Q96P48 1450 aa22.24■■□□□ 1.15
TUBA4A-205ENST00000427737 CYB5RLQ6IPT4 315 aa22.2■■□□□ 1.14
TUBA4A-205ENST00000427737 SNAPC4Q5SXM2 1469 aa22.2■■□□□ 1.14
TUBA4A-205ENST00000427737 FBLN2P98095 1184 aa22.18■■□□□ 1.14
TUBA4A-205ENST00000427737 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
TUBA4A-205ENST00000427737 ABCA10Q8WWZ4 1543 aa22.15■■□□□ 1.14
TUBA4A-205ENST00000427737 MAGI1Q96QZ7 1491 aaPredicted RBP22.14■■□□□ 1.13
TUBA4A-205ENST00000427737 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.13
TUBA4A-205ENST00000427737 TOP2BQ02880 1626 aa22.13■■□□□ 1.13
TUBA4A-205ENST00000427737 BIVM-ERCC5R4GMW8 1640 aa22.13■■□□□ 1.13
TUBA4A-205ENST00000427737 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
TUBA4A-205ENST00000427737 GAPVD1Q14C86 1478 aa22.12■■□□□ 1.13
TUBA4A-205ENST00000427737 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
TUBA4A-205ENST00000427737 ABCA5Q8WWZ7 1642 aa22.11■■□□□ 1.13
TUBA4A-205ENST00000427737 CLASP1Q7Z460 1538 aa22.08■■□□□ 1.13
TUBA4A-205ENST00000427737 SYNJ2O15056 1496 aa22.06■■□□□ 1.12
TUBA4A-205ENST00000427737 TRHP20396 242 aaPredicted RBP22.05■■□□□ 1.12
TUBA4A-205ENST00000427737 CHMP7Q8WUX9 453 aaPredicted RBP22.05■■□□□ 1.12
TUBA4A-205ENST00000427737 ADAMTS12P58397 1594 aa21.93■■□□□ 1.1
TUBA4A-205ENST00000427737 GRIN2AQ12879 1464 aa21.89■■□□□ 1.09
TUBA4A-205ENST00000427737 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
TUBA4A-205ENST00000427737 FHAD1B1AJZ9 1412 aa21.84■■□□□ 1.09
TUBA4A-205ENST00000427737 CEP170Q5SW79 1584 aa21.81■■□□□ 1.08
TUBA4A-205ENST00000427737 NUP160Q12769 1436 aa21.8■■□□□ 1.08
TUBA4A-205ENST00000427737 ERCC6L2Q5T890 1561 aa21.7■■□□□ 1.06
TUBA4A-205ENST00000427737 SHROOM2Q13796 1616 aa21.69■■□□□ 1.06
TUBA4A-205ENST00000427737 AEBP2Q6ZN18 517 aaPredicted RBP21.68■■□□□ 1.06
TUBA4A-205ENST00000427737 KIF27Q86VH2 1401 aa21.68■■□□□ 1.06
TUBA4A-205ENST00000427737 IGF1RP08069 1367 aa21.63■■□□□ 1.05
TUBA4A-205ENST00000427737 RUSC2Q8N2Y8 1516 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms