RNA–Protein interactions for RNA: ENST00000427589.2

TRBV29OR9-2-201, Transcript of T cell receptor beta variable 29/OR9-2 (non-functional), humanhuman

BASIC

Gene TRBV29OR9-2, Length 333 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV29OR9-2-201ENST00000427589 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
TRBV29OR9-2-201ENST00000427589 CCDC180Q9P1Z9 1646 aa15.42■□□□□ 0.06
TRBV29OR9-2-201ENST00000427589 ABCC9O60706 1549 aa15.14■□□□□ 0.01
TRBV29OR9-2-201ENST00000427589 RB1CC1Q8TDY2 1594 aa14.49□□□□□ -0.09
TRBV29OR9-2-201ENST00000427589 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
TRBV29OR9-2-201ENST00000427589 NACADO15069 1562 aa14.4□□□□□ -0.1
TRBV29OR9-2-201ENST00000427589 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
TRBV29OR9-2-201ENST00000427589 DCAF8L2P0C7V8 631 aa14.24□□□□□ -0.13
TRBV29OR9-2-201ENST00000427589 MYO15BQ96JP2 1530 aa14.22□□□□□ -0.13
TRBV29OR9-2-201ENST00000427589 BICRAQ9NZM4 1560 aa14.16□□□□□ -0.14
TRBV29OR9-2-201ENST00000427589 DCAF1Q9Y4B6 1507 aa14.13□□□□□ -0.15
TRBV29OR9-2-201ENST00000427589 SCRIBQ14160 1630 aa14.04□□□□□ -0.16
TRBV29OR9-2-201ENST00000427589 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
TRBV29OR9-2-201ENST00000427589 DNAJC5BQ9UF47 199 aa14.03□□□□□ -0.16
TRBV29OR9-2-201ENST00000427589 SHROOM4Q9ULL8 1493 aa13.8□□□□□ -0.2
TRBV29OR9-2-201ENST00000427589 CC2D2AQ9P2K1 1620 aa13.76□□□□□ -0.21
TRBV29OR9-2-201ENST00000427589 EIF4G1Q04637 1599 aaKnown RBP13.74□□□□□ -0.21
TRBV29OR9-2-201ENST00000427589 CECR2Q9BXF3 1484 aa13.58□□□□□ -0.24
TRBV29OR9-2-201ENST00000427589 SMARCA4P51532 1647 aa13.4□□□□□ -0.26
TRBV29OR9-2-201ENST00000427589 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
TRBV29OR9-2-201ENST00000427589 ATAD2BQ9ULI0 1458 aa13.27□□□□□ -0.29
TRBV29OR9-2-201ENST00000427589 SMARCA2P51531 1590 aa13.24□□□□□ -0.29
TRBV29OR9-2-201ENST00000427589 HMGXB3Q12766 1538 aa13.24□□□□□ -0.29
TRBV29OR9-2-201ENST00000427589 NCAPD3P42695 1498 aa13.24□□□□□ -0.29
TRBV29OR9-2-201ENST00000427589 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
TRBV29OR9-2-201ENST00000427589 PEG3Q9GZU2 1588 aa13.24□□□□□ -0.29
TRBV29OR9-2-201ENST00000427589 WIZO95785 1651 aa13.18□□□□□ -0.3
TRBV29OR9-2-201ENST00000427589 BAZ1BQ9UIG0 1483 aaKnown RBP13.15□□□□□ -0.3
TRBV29OR9-2-201ENST00000427589 NESP48681 1621 aa13.1□□□□□ -0.31
TRBV29OR9-2-201ENST00000427589 KIF21AQ7Z4S6 1674 aa13.09□□□□□ -0.31
TRBV29OR9-2-201ENST00000427589 THOC2Q8NI27 1593 aaKnown RBP13.01□□□□□ -0.33
TRBV29OR9-2-201ENST00000427589 LAMC3Q9Y6N6 1575 aa13.01□□□□□ -0.33
TRBV29OR9-2-201ENST00000427589 ERCC6Q03468 1493 aa12.99□□□□□ -0.33
TRBV29OR9-2-201ENST00000427589 PRDM2Q13029 1718 aa12.96□□□□□ -0.34
TRBV29OR9-2-201ENST00000427589 RSF1Q96T23 1441 aaPredicted RBP12.95□□□□□ -0.34
TRBV29OR9-2-201ENST00000427589 CUX2O14529 1486 aa12.92□□□□□ -0.34
TRBV29OR9-2-201ENST00000427589 TOP2AP11388 1531 aaKnown RBP12.92□□□□□ -0.34
TRBV29OR9-2-201ENST00000427589 CADPSQ9ULU8 1353 aa12.82□□□□□ -0.36
TRBV29OR9-2-201ENST00000427589 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
TRBV29OR9-2-201ENST00000427589 WDR62O43379 1518 aa12.78□□□□□ -0.36
TRBV29OR9-2-201ENST00000427589 CFTRP13569 1480 aa12.76□□□□□ -0.37
TRBV29OR9-2-201ENST00000427589 MRC2Q9UBG0 1479 aa12.76□□□□□ -0.37
TRBV29OR9-2-201ENST00000427589 FANCD2Q9BXW9 1451 aa12.74□□□□□ -0.37
TRBV29OR9-2-201ENST00000427589 CCDC88BA6NC98 1476 aa12.73□□□□□ -0.37
TRBV29OR9-2-201ENST00000427589 CEP164Q9UPV0 1460 aa12.73□□□□□ -0.37
TRBV29OR9-2-201ENST00000427589 URB2Q14146 1524 aaKnown RBP12.68□□□□□ -0.38
TRBV29OR9-2-201ENST00000427589 DNAJC5Q9H3Z4 198 aa12.66□□□□□ -0.38
TRBV29OR9-2-201ENST00000427589 TOPBP1Q92547 1522 aa12.56□□□□□ -0.4
TRBV29OR9-2-201ENST00000427589 DNMBPQ6XZF7 1577 aa12.55□□□□□ -0.4
TRBV29OR9-2-201ENST00000427589 EIF4G3O43432 1585 aaKnown RBP12.51□□□□□ -0.41
TRBV29OR9-2-201ENST00000427589 TARBP1Q13395 1621 aaKnown RBP12.51□□□□□ -0.41
TRBV29OR9-2-201ENST00000427589 CHD1O14646 1710 aa12.49□□□□□ -0.41
TRBV29OR9-2-201ENST00000427589 ZNF608Q9ULD9 1512 aaPredicted RBP12.49□□□□□ -0.41
TRBV29OR9-2-201ENST00000427589 WDR97A6NE52 1622 aa12.47□□□□□ -0.41
TRBV29OR9-2-201ENST00000427589 IFT140Q96RY7 1462 aa12.45□□□□□ -0.42
TRBV29OR9-2-201ENST00000427589 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
TRBV29OR9-2-201ENST00000427589 CUX1P39880 1505 aa12.43□□□□□ -0.42
TRBV29OR9-2-201ENST00000427589 POLA1P09884 1462 aaPredicted RBP12.43□□□□□ -0.42
TRBV29OR9-2-201ENST00000427589 SUPT5HO00267 1087 aaKnown RBP12.43□□□□□ -0.42
TRBV29OR9-2-201ENST00000427589 PBRM1Q86U86 1689 aa12.41□□□□□ -0.42
TRBV29OR9-2-201ENST00000427589 RAD54L2Q9Y4B4 1467 aa12.39□□□□□ -0.43
TRBV29OR9-2-201ENST00000427589 FGD5Q6ZNL6 1462 aa12.38□□□□□ -0.43
TRBV29OR9-2-201ENST00000427589 AQRO60306 1485 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRBV29OR9-2-201ENST00000427589 BIVM-ERCC5R4GMW8 1640 aa12.35□□□□□ -0.43
TRBV29OR9-2-201ENST00000427589 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.43
TRBV29OR9-2-201ENST00000427589 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.43
TRBV29OR9-2-201ENST00000427589 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.43
TRBV29OR9-2-201ENST00000427589 SYNJ1O43426 1573 aa12.32□□□□□ -0.44
TRBV29OR9-2-201ENST00000427589 ABCA5Q8WWZ7 1642 aa12.3□□□□□ -0.44
TRBV29OR9-2-201ENST00000427589 SOGA1O94964 1423 aa12.29□□□□□ -0.44
TRBV29OR9-2-201ENST00000427589 TOP2BQ02880 1626 aa12.29□□□□□ -0.44
TRBV29OR9-2-201ENST00000427589 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.45
TRBV29OR9-2-201ENST00000427589 SNAPC4Q5SXM2 1469 aa12.26□□□□□ -0.45
TRBV29OR9-2-201ENST00000427589 OSCARQ8IYS5 282 aa12.25□□□□□ -0.45
TRBV29OR9-2-201ENST00000427589 ARHGEF11O15085 1522 aa12.23□□□□□ -0.45
TRBV29OR9-2-201ENST00000427589 ABCA10Q8WWZ4 1543 aa12.22□□□□□ -0.45
TRBV29OR9-2-201ENST00000427589 CLASP1Q7Z460 1538 aa12.21□□□□□ -0.46
TRBV29OR9-2-201ENST00000427589 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
TRBV29OR9-2-201ENST00000427589 GRIN2BQ13224 1484 aa12.19□□□□□ -0.46
TRBV29OR9-2-201ENST00000427589 GAPVD1Q14C86 1478 aa12.19□□□□□ -0.46
TRBV29OR9-2-201ENST00000427589 MAGI1Q96QZ7 1491 aaPredicted RBP12.19□□□□□ -0.46
TRBV29OR9-2-201ENST00000427589 WRNQ14191 1432 aaPredicted RBP eCLIP12.19□□□□□ -0.46
TRBV29OR9-2-201ENST00000427589 ADAMTS12P58397 1594 aa12.18□□□□□ -0.46
TRBV29OR9-2-201ENST00000427589 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
TRBV29OR9-2-201ENST00000427589 FBLN2P98095 1184 aa12.14□□□□□ -0.47
TRBV29OR9-2-201ENST00000427589 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
TRBV29OR9-2-201ENST00000427589 CEP170Q5SW79 1584 aa12.11□□□□□ -0.47
TRBV29OR9-2-201ENST00000427589 ERICH3Q5RHP9 1530 aa12.08□□□□□ -0.48
TRBV29OR9-2-201ENST00000427589 ERCC6L2Q5T890 1561 aa12.08□□□□□ -0.48
TRBV29OR9-2-201ENST00000427589 GRIN2AQ12879 1464 aa12.08□□□□□ -0.48
TRBV29OR9-2-201ENST00000427589 SHROOM2Q13796 1616 aa12.07□□□□□ -0.48
TRBV29OR9-2-201ENST00000427589 CHMP7Q8WUX9 453 aaPredicted RBP12.05□□□□□ -0.48
TRBV29OR9-2-201ENST00000427589 RUSC2Q8N2Y8 1516 aa12.01□□□□□ -0.49
TRBV29OR9-2-201ENST00000427589 CUL7Q14999 1698 aa12.01□□□□□ -0.49
TRBV29OR9-2-201ENST00000427589 NUP160Q12769 1436 aa12.01□□□□□ -0.49
TRBV29OR9-2-201ENST00000427589 CYB5RLQ6IPT4 315 aa12□□□□□ -0.49
TRBV29OR9-2-201ENST00000427589 FHAD1B1AJZ9 1412 aa12□□□□□ -0.49
TRBV29OR9-2-201ENST00000427589 KIF13AQ9H1H9 1805 aa11.94□□□□□ -0.5
TRBV29OR9-2-201ENST00000427589 KIF27Q86VH2 1401 aa11.9□□□□□ -0.5
TRBV29OR9-2-201ENST00000427589 CTTNBP2Q8WZ74 1663 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms