RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 NISCHQ9Y2I1 1504 aa28.42■■■□□ 2.14
HDLBP-215ENST00000427487 CCDC180Q9P1Z9 1646 aa25.09■■□□□ 1.61
HDLBP-215ENST00000427487 ABCC9O60706 1549 aa23.88■■□□□ 1.41
HDLBP-215ENST00000427487 ZCCHC6Q5VYS8 1495 aaKnown RBP23.79■■□□□ 1.4
HDLBP-215ENST00000427487 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
HDLBP-215ENST00000427487 MYO15BQ96JP2 1530 aa23.6■■□□□ 1.37
HDLBP-215ENST00000427487 NACADO15069 1562 aa23.48■■□□□ 1.35
HDLBP-215ENST00000427487 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.33
HDLBP-215ENST00000427487 DCAF8L2P0C7V8 631 aa23.33■■□□□ 1.33
HDLBP-215ENST00000427487 SCRIBQ14160 1630 aa22.77■■□□□ 1.24
HDLBP-215ENST00000427487 UNC13AQ9UPW8 1703 aa22.73■■□□□ 1.23
HDLBP-215ENST00000427487 BICRAQ9NZM4 1560 aa22.56■■□□□ 1.2
HDLBP-215ENST00000427487 SHROOM4Q9ULL8 1493 aa22.56■■□□□ 1.2
HDLBP-215ENST00000427487 PABPN1Q86U42 306 aaKnown RBP eCLIP22.36■■□□□ 1.17
HDLBP-215ENST00000427487 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
HDLBP-215ENST00000427487 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
HDLBP-215ENST00000427487 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
HDLBP-215ENST00000427487 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
HDLBP-215ENST00000427487 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
HDLBP-215ENST00000427487 RSF1Q96T23 1441 aaPredicted RBP21.81■■□□□ 1.08
HDLBP-215ENST00000427487 PEG3Q9GZU2 1588 aa21.79■■□□□ 1.08
HDLBP-215ENST00000427487 SMARCA2P51531 1590 aa21.73■■□□□ 1.07
HDLBP-215ENST00000427487 CC2D2AQ9P2K1 1620 aa21.69■■□□□ 1.06
HDLBP-215ENST00000427487 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
HDLBP-215ENST00000427487 NCAPD3P42695 1498 aa21.65■■□□□ 1.06
HDLBP-215ENST00000427487 WIZO95785 1651 aa21.6■■□□□ 1.05
HDLBP-215ENST00000427487 HMGXB3Q12766 1538 aa21.6■■□□□ 1.05
HDLBP-215ENST00000427487 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.03
HDLBP-215ENST00000427487 TOP2AP11388 1531 aaKnown RBP21.5■■□□□ 1.03
HDLBP-215ENST00000427487 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
HDLBP-215ENST00000427487 DNAJC5BQ9UF47 199 aa21.44■■□□□ 1.02
HDLBP-215ENST00000427487 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
HDLBP-215ENST00000427487 CFTRP13569 1480 aa21.01■□□□□ 0.95
HDLBP-215ENST00000427487 CADPSQ9ULU8 1353 aa21.01■□□□□ 0.95
HDLBP-215ENST00000427487 LAMC3Q9Y6N6 1575 aa20.98■□□□□ 0.95
HDLBP-215ENST00000427487 PRDM2Q13029 1718 aa20.88■□□□□ 0.93
HDLBP-215ENST00000427487 PDS5BQ9NTI5 1447 aa20.82■□□□□ 0.92
HDLBP-215ENST00000427487 NESP48681 1621 aa20.81■□□□□ 0.92
HDLBP-215ENST00000427487 FANCD2Q9BXW9 1451 aa20.73■□□□□ 0.91
HDLBP-215ENST00000427487 CEP164Q9UPV0 1460 aa20.67■□□□□ 0.9
HDLBP-215ENST00000427487 KIF21AQ7Z4S6 1674 aa20.61■□□□□ 0.89
HDLBP-215ENST00000427487 ABCC8Q09428 1581 aa20.59■□□□□ 0.89
HDLBP-215ENST00000427487 ERCC6Q03468 1493 aa20.59■□□□□ 0.89
HDLBP-215ENST00000427487 WRNQ14191 1432 aaPredicted RBP eCLIP20.56■□□□□ 0.88
HDLBP-215ENST00000427487 MRC2Q9UBG0 1479 aa20.54■□□□□ 0.88
HDLBP-215ENST00000427487 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
HDLBP-215ENST00000427487 TOP2BQ02880 1626 aa20.48■□□□□ 0.87
HDLBP-215ENST00000427487 WDR62O43379 1518 aa20.48■□□□□ 0.87
HDLBP-215ENST00000427487 THOC2Q8NI27 1593 aaKnown RBP20.47■□□□□ 0.87
HDLBP-215ENST00000427487 BIVM-ERCC5R4GMW8 1640 aa20.47■□□□□ 0.87
HDLBP-215ENST00000427487 CUX1P39880 1505 aa20.47■□□□□ 0.87
HDLBP-215ENST00000427487 URB2Q14146 1524 aaKnown RBP20.47■□□□□ 0.87
HDLBP-215ENST00000427487 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
HDLBP-215ENST00000427487 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
HDLBP-215ENST00000427487 SYNJ1O43426 1573 aa20.42■□□□□ 0.86
HDLBP-215ENST00000427487 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
HDLBP-215ENST00000427487 POLA1P09884 1462 aaPredicted RBP20.31■□□□□ 0.84
HDLBP-215ENST00000427487 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
HDLBP-215ENST00000427487 CUX2O14529 1486 aa20.3■□□□□ 0.84
HDLBP-215ENST00000427487 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
HDLBP-215ENST00000427487 SOGA1O94964 1423 aa20.24■□□□□ 0.83
HDLBP-215ENST00000427487 ABCA10Q8WWZ4 1543 aa20.22■□□□□ 0.83
HDLBP-215ENST00000427487 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
HDLBP-215ENST00000427487 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
HDLBP-215ENST00000427487 EEA1Q15075 1411 aa20.15■□□□□ 0.82
HDLBP-215ENST00000427487 RAD54L2Q9Y4B4 1467 aa20.15■□□□□ 0.82
HDLBP-215ENST00000427487 KIF27Q86VH2 1401 aa20.11■□□□□ 0.81
HDLBP-215ENST00000427487 ABCA5Q8WWZ7 1642 aa20.06■□□□□ 0.8
HDLBP-215ENST00000427487 GAPVD1Q14C86 1478 aa20.03■□□□□ 0.8
HDLBP-215ENST00000427487 ERICH3Q5RHP9 1530 aa20.01■□□□□ 0.79
HDLBP-215ENST00000427487 ZNF608Q9ULD9 1512 aaPredicted RBP20.01■□□□□ 0.79
HDLBP-215ENST00000427487 TDRD9Q8NDG6 1382 aaKnown RBP20■□□□□ 0.79
HDLBP-215ENST00000427487 EIF4G3O43432 1585 aaKnown RBP19.99■□□□□ 0.79
HDLBP-215ENST00000427487 GRIN2BQ13224 1484 aa19.98■□□□□ 0.79
HDLBP-215ENST00000427487 AQRO60306 1485 aaKnown RBP eCLIP19.96■□□□□ 0.795e-8■■■■□ 19.3
HDLBP-215ENST00000427487 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
HDLBP-215ENST00000427487 IGF1RP08069 1367 aa19.95■□□□□ 0.78
HDLBP-215ENST00000427487 CSRNP3Q8WYN3 585 aa19.93■□□□□ 0.78
HDLBP-215ENST00000427487 PBRM1Q86U86 1689 aa19.92■□□□□ 0.78
HDLBP-215ENST00000427487 MAGI1Q96QZ7 1491 aaPredicted RBP19.91■□□□□ 0.78
HDLBP-215ENST00000427487 CUL7Q14999 1698 aa19.91■□□□□ 0.78
HDLBP-215ENST00000427487 PRXQ9BXM0 1461 aa19.86■□□□□ 0.77
HDLBP-215ENST00000427487 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
HDLBP-215ENST00000427487 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.77
HDLBP-215ENST00000427487 KIF21BO75037 1637 aa19.83■□□□□ 0.76
HDLBP-215ENST00000427487 ADAMTS12P58397 1594 aa19.82■□□□□ 0.76
HDLBP-215ENST00000427487 SNAPC4Q5SXM2 1469 aa19.81■□□□□ 0.76
HDLBP-215ENST00000427487 FAM9AQ8IZU1 332 aaPredicted RBP19.79■□□□□ 0.76
HDLBP-215ENST00000427487 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
HDLBP-215ENST00000427487 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
HDLBP-215ENST00000427487 GOLGA3Q08378 1498 aa19.73■□□□□ 0.75
HDLBP-215ENST00000427487 GRIN2AQ12879 1464 aa19.7■□□□□ 0.74
HDLBP-215ENST00000427487 CHMP7Q8WUX9 453 aaPredicted RBP19.68■□□□□ 0.74
HDLBP-215ENST00000427487 NUP160Q12769 1436 aa19.63■□□□□ 0.73
HDLBP-215ENST00000427487 CHD1O14646 1710 aa19.61■□□□□ 0.73
HDLBP-215ENST00000427487 TNIKQ9UKE5 1360 aa19.6■□□□□ 0.73
HDLBP-215ENST00000427487 KIAA0586Q9BVV6 1533 aa19.57■□□□□ 0.72
HDLBP-215ENST00000427487 FBLN2P98095 1184 aa19.56■□□□□ 0.72
HDLBP-215ENST00000427487 CTTNBP2Q8WZ74 1663 aa19.55■□□□□ 0.72
HDLBP-215ENST00000427487 CEP170Q5SW79 1584 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms