RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 NISCHQ9Y2I1 1504 aa39.77■■■■□ 3.96
CHEK1-202ENST00000427383 CCDC180Q9P1Z9 1646 aa34.91■■■■□ 3.18
CHEK1-202ENST00000427383 ZCCHC6Q5VYS8 1495 aaKnown RBP33.39■■■□□ 2.94
CHEK1-202ENST00000427383 ABCC9O60706 1549 aa33.06■■■□□ 2.88
CHEK1-202ENST00000427383 DCAF1Q9Y4B6 1507 aa32.97■■■□□ 2.87
CHEK1-202ENST00000427383 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
CHEK1-202ENST00000427383 DCAF8L2P0C7V8 631 aa32.61■■■□□ 2.81
CHEK1-202ENST00000427383 NACADO15069 1562 aa32.5■■■□□ 2.79
CHEK1-202ENST00000427383 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
CHEK1-202ENST00000427383 SHROOM4Q9ULL8 1493 aa32.04■■■□□ 2.72
CHEK1-202ENST00000427383 SCRIBQ14160 1630 aa31.94■■■□□ 2.7
CHEK1-202ENST00000427383 UNC13AQ9UPW8 1703 aa31.71■■■□□ 2.67
CHEK1-202ENST00000427383 BICRAQ9NZM4 1560 aa31.36■■■□□ 2.61
CHEK1-202ENST00000427383 PABPN1Q86U42 306 aaKnown RBP eCLIP31.03■■■□□ 2.56
CHEK1-202ENST00000427383 CECR2Q9BXF3 1484 aa30.88■■■□□ 2.53
CHEK1-202ENST00000427383 BAZ1AQ9NRL2 1556 aaPredicted RBP30.74■■■□□ 2.51
CHEK1-202ENST00000427383 RSF1Q96T23 1441 aaPredicted RBP30.7■■■□□ 2.51
CHEK1-202ENST00000427383 MROH2BQ7Z745 1585 aa30.69■■■□□ 2.5
CHEK1-202ENST00000427383 SMARCA4P51532 1647 aa30.66■■■□□ 2.5
CHEK1-202ENST00000427383 SUPT5HO00267 1087 aaKnown RBP30.63■■■□□ 2.49
CHEK1-202ENST00000427383 WIZO95785 1651 aa30.44■■■□□ 2.46
CHEK1-202ENST00000427383 EIF4G1Q04637 1599 aaKnown RBP30.4■■■□□ 2.46
CHEK1-202ENST00000427383 PEG3Q9GZU2 1588 aa30.36■■■□□ 2.45
CHEK1-202ENST00000427383 SMARCA2P51531 1590 aa30.18■■■□□ 2.42
CHEK1-202ENST00000427383 ATAD2BQ9ULI0 1458 aa30.18■■■□□ 2.42
CHEK1-202ENST00000427383 TOP2AP11388 1531 aaKnown RBP30.14■■■□□ 2.42
CHEK1-202ENST00000427383 CC2D2AQ9P2K1 1620 aa30■■■□□ 2.39
CHEK1-202ENST00000427383 NCAPD3P42695 1498 aa29.98■■■□□ 2.39
CHEK1-202ENST00000427383 HMGXB3Q12766 1538 aa29.97■■■□□ 2.39
CHEK1-202ENST00000427383 BAZ1BQ9UIG0 1483 aaKnown RBP29.97■■■□□ 2.39
CHEK1-202ENST00000427383 CCDC88BA6NC98 1476 aa29.77■■■□□ 2.36
CHEK1-202ENST00000427383 DNAJC5BQ9UF47 199 aa29.37■■■□□ 2.29
CHEK1-202ENST00000427383 CHIC1Q5VXU3 224 aa29.27■■■□□ 2.28
CHEK1-202ENST00000427383 CFTRP13569 1480 aa29.24■■■□□ 2.27
CHEK1-202ENST00000427383 PRDM2Q13029 1718 aa29.19■■■□□ 2.26
CHEK1-202ENST00000427383 CADPSQ9ULU8 1353 aa29.14■■■□□ 2.25
CHEK1-202ENST00000427383 ABCC8Q09428 1581 aa29.05■■■□□ 2.24
CHEK1-202ENST00000427383 LAMC3Q9Y6N6 1575 aa29.04■■■□□ 2.24
CHEK1-202ENST00000427383 NESP48681 1621 aa28.98■■■□□ 2.23
CHEK1-202ENST00000427383 WRNQ14191 1432 aaPredicted RBP eCLIP28.88■■■□□ 2.21
CHEK1-202ENST00000427383 TRIM41Q8WV44 630 aa28.86■■■□□ 2.21
CHEK1-202ENST00000427383 SYNJ1O43426 1573 aa28.85■■■□□ 2.21
CHEK1-202ENST00000427383 FANCD2Q9BXW9 1451 aa28.83■■■□□ 2.21
CHEK1-202ENST00000427383 TOP2BQ02880 1626 aa28.78■■■□□ 2.2
CHEK1-202ENST00000427383 BIVM-ERCC5R4GMW8 1640 aa28.78■■■□□ 2.2
CHEK1-202ENST00000427383 CUX1P39880 1505 aa28.73■■■□□ 2.19
CHEK1-202ENST00000427383 PDS5BQ9NTI5 1447 aa28.73■■■□□ 2.19
CHEK1-202ENST00000427383 KIF21AQ7Z4S6 1674 aa28.71■■■□□ 2.19
CHEK1-202ENST00000427383 CEP164Q9UPV0 1460 aa28.69■■■□□ 2.18
CHEK1-202ENST00000427383 DNMBPQ6XZF7 1577 aa28.58■■■□□ 2.17
CHEK1-202ENST00000427383 URB2Q14146 1524 aaKnown RBP28.52■■■□□ 2.16
CHEK1-202ENST00000427383 TOPBP1Q92547 1522 aa28.51■■■□□ 2.15
CHEK1-202ENST00000427383 FGD5Q6ZNL6 1462 aa28.43■■■□□ 2.14
CHEK1-202ENST00000427383 MRC2Q9UBG0 1479 aa28.42■■■□□ 2.14
CHEK1-202ENST00000427383 SOGA1O94964 1423 aa28.41■■■□□ 2.14
CHEK1-202ENST00000427383 POLA1P09884 1462 aaPredicted RBP28.36■■■□□ 2.13
CHEK1-202ENST00000427383 ERCC6Q03468 1493 aa28.36■■■□□ 2.13
CHEK1-202ENST00000427383 EEA1Q15075 1411 aa28.35■■■□□ 2.13
CHEK1-202ENST00000427383 WDR62O43379 1518 aa28.35■■■□□ 2.13
CHEK1-202ENST00000427383 THOC2Q8NI27 1593 aaKnown RBP28.35■■■□□ 2.13
CHEK1-202ENST00000427383 RUSC2Q8N2Y8 1516 aa28.33■■■□□ 2.13
CHEK1-202ENST00000427383 FAM9AQ8IZU1 332 aaPredicted RBP28.26■■■□□ 2.11
CHEK1-202ENST00000427383 WDR97A6NE52 1622 aa28.24■■■□□ 2.11
CHEK1-202ENST00000427383 ABCA10Q8WWZ4 1543 aa28.21■■■□□ 2.11
CHEK1-202ENST00000427383 RAD54L2Q9Y4B4 1467 aa28.2■■■□□ 2.11
CHEK1-202ENST00000427383 TARBP1Q13395 1621 aaKnown RBP28.17■■■□□ 2.1
CHEK1-202ENST00000427383 KIF27Q86VH2 1401 aa28.17■■■□□ 2.1
CHEK1-202ENST00000427383 CUX2O14529 1486 aa28.15■■■□□ 2.1
CHEK1-202ENST00000427383 CSRNP3Q8WYN3 585 aa28.1■■■□□ 2.09
CHEK1-202ENST00000427383 LOC105371045A0A1W2PR82 267 aa28.07■■■□□ 2.08
CHEK1-202ENST00000427383 ABCA5Q8WWZ7 1642 aa28.06■■■□□ 2.08
CHEK1-202ENST00000427383 KIF21BO75037 1637 aa28.06■■■□□ 2.08
CHEK1-202ENST00000427383 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
CHEK1-202ENST00000427383 PRXQ9BXM0 1461 aa27.97■■■□□ 2.07
CHEK1-202ENST00000427383 IGF1RP08069 1367 aa27.94■■■□□ 2.06
CHEK1-202ENST00000427383 GOLGA3Q08378 1498 aa27.92■■■□□ 2.06
CHEK1-202ENST00000427383 ERICH3Q5RHP9 1530 aa27.92■■■□□ 2.06
CHEK1-202ENST00000427383 TDRD9Q8NDG6 1382 aaKnown RBP27.91■■■□□ 2.06
CHEK1-202ENST00000427383 GAPVD1Q14C86 1478 aa27.91■■■□□ 2.06
CHEK1-202ENST00000427383 RAPGEF2Q9Y4G8 1499 aa27.88■■■□□ 2.05
CHEK1-202ENST00000427383 CUL7Q14999 1698 aa27.86■■■□□ 2.05
CHEK1-202ENST00000427383 PBRM1Q86U86 1689 aa27.86■■■□□ 2.05
CHEK1-202ENST00000427383 ZNF608Q9ULD9 1512 aaPredicted RBP27.86■■■□□ 2.05
CHEK1-202ENST00000427383 EIF4G3O43432 1585 aaKnown RBP27.84■■■□□ 2.05
CHEK1-202ENST00000427383 EHMT2Q96KQ7 1210 aa27.81■■■□□ 2.04
CHEK1-202ENST00000427383 AQRO60306 1485 aaKnown RBP eCLIP27.81■■■□□ 2.045e-8■■■■■ 34.4
CHEK1-202ENST00000427383 CARMIL1Q5VZK9 1371 aa27.77■■■□□ 2.04
CHEK1-202ENST00000427383 TNIKQ9UKE5 1360 aa27.76■■■□□ 2.03
CHEK1-202ENST00000427383 GRIN2BQ13224 1484 aa27.74■■■□□ 2.03
CHEK1-202ENST00000427383 ADAMTS12P58397 1594 aa27.69■■■□□ 2.02
CHEK1-202ENST00000427383 UBTFP17480 764 aaKnown RBP27.65■■■□□ 2.02
CHEK1-202ENST00000427383 FHAD1B1AJZ9 1412 aa27.61■■■□□ 2.01
CHEK1-202ENST00000427383 CEP162Q5TB80 1403 aa27.6■■■□□ 2.01
CHEK1-202ENST00000427383 SNAPC4Q5SXM2 1469 aa27.6■■■□□ 2.01
CHEK1-202ENST00000427383 MAGI1Q96QZ7 1491 aaPredicted RBP27.58■■■□□ 2.01
CHEK1-202ENST00000427383 CTTNBP2Q8WZ74 1663 aa27.53■■■□□ 2
CHEK1-202ENST00000427383 SYNJ2O15056 1496 aa27.46■■□□□ 1.99
CHEK1-202ENST00000427383 CLIP1P30622 1438 aa27.43■■□□□ 1.98
CHEK1-202ENST00000427383 GRIN2AQ12879 1464 aa27.43■■□□□ 1.98
CHEK1-202ENST00000427383 ARHGAP35Q9NRY4 1499 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms