RNA–Protein interactions for RNA: ENST00000426797.7

EDC3-202, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-202ENST00000426797 NISCHQ9Y2I1 1504 aa39.25■■■■□ 3.87
EDC3-202ENST00000426797 CCDC180Q9P1Z9 1646 aa34.42■■■■□ 3.1
EDC3-202ENST00000426797 ABCC9O60706 1549 aa33.15■■■□□ 2.9
EDC3-202ENST00000426797 ZCCHC6Q5VYS8 1495 aaKnown RBP32.82■■■□□ 2.85
EDC3-202ENST00000426797 DCAF8L2P0C7V8 631 aa32.73■■■□□ 2.83
EDC3-202ENST00000426797 DCAF1Q9Y4B6 1507 aa32.43■■■□□ 2.78
EDC3-202ENST00000426797 MYO15BQ96JP2 1530 aa32.26■■■□□ 2.75
EDC3-202ENST00000426797 NACADO15069 1562 aa32.24■■■□□ 2.75
EDC3-202ENST00000426797 RB1CC1Q8TDY2 1594 aa32.09■■■□□ 2.73
EDC3-202ENST00000426797 SHROOM4Q9ULL8 1493 aa31.67■■■□□ 2.66
EDC3-202ENST00000426797 SCRIBQ14160 1630 aa31.61■■■□□ 2.65
EDC3-202ENST00000426797 UNC13AQ9UPW8 1703 aa31.42■■■□□ 2.62
EDC3-202ENST00000426797 PABPN1Q86U42 306 aaKnown RBP eCLIP31.21■■■□□ 2.59
EDC3-202ENST00000426797 BICRAQ9NZM4 1560 aa31.15■■■□□ 2.58
EDC3-202ENST00000426797 CECR2Q9BXF3 1484 aa30.58■■■□□ 2.49
EDC3-202ENST00000426797 BAZ1AQ9NRL2 1556 aaPredicted RBP30.33■■■□□ 2.45
EDC3-202ENST00000426797 MROH2BQ7Z745 1585 aa30.31■■■□□ 2.44
EDC3-202ENST00000426797 SMARCA4P51532 1647 aa30.26■■■□□ 2.44
EDC3-202ENST00000426797 RSF1Q96T23 1441 aaPredicted RBP30.26■■■□□ 2.43
EDC3-202ENST00000426797 EIF4G1Q04637 1599 aaKnown RBP30.26■■■□□ 2.43
EDC3-202ENST00000426797 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
EDC3-202ENST00000426797 WIZO95785 1651 aa30.03■■■□□ 2.4
EDC3-202ENST00000426797 CC2D2AQ9P2K1 1620 aa29.96■■■□□ 2.39
EDC3-202ENST00000426797 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.39
EDC3-202ENST00000426797 PEG3Q9GZU2 1588 aa29.92■■■□□ 2.38
EDC3-202ENST00000426797 SMARCA2P51531 1590 aa29.88■■■□□ 2.37
EDC3-202ENST00000426797 DNAJC5BQ9UF47 199 aa29.85■■■□□ 2.37
EDC3-202ENST00000426797 NCAPD3P42695 1498 aa29.8■■■□□ 2.36
EDC3-202ENST00000426797 BAZ1BQ9UIG0 1483 aaKnown RBP29.72■■■□□ 2.35
EDC3-202ENST00000426797 TOP2AP11388 1531 aaKnown RBP29.66■■■□□ 2.34
EDC3-202ENST00000426797 HMGXB3Q12766 1538 aa29.65■■■□□ 2.34
EDC3-202ENST00000426797 CCDC88BA6NC98 1476 aa29.41■■■□□ 2.3
EDC3-202ENST00000426797 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.24
EDC3-202ENST00000426797 CFTRP13569 1480 aa28.97■■■□□ 2.23
EDC3-202ENST00000426797 NESP48681 1621 aa28.93■■■□□ 2.22
EDC3-202ENST00000426797 LAMC3Q9Y6N6 1575 aa28.84■■■□□ 2.21
EDC3-202ENST00000426797 PRDM2Q13029 1718 aa28.7■■■□□ 2.18
EDC3-202ENST00000426797 PDS5BQ9NTI5 1447 aa28.67■■■□□ 2.18
EDC3-202ENST00000426797 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
EDC3-202ENST00000426797 CHIC1Q5VXU3 224 aa28.63■■■□□ 2.17
EDC3-202ENST00000426797 ABCC8Q09428 1581 aa28.59■■■□□ 2.17
EDC3-202ENST00000426797 KIF21AQ7Z4S6 1674 aa28.52■■■□□ 2.16
EDC3-202ENST00000426797 CEP164Q9UPV0 1460 aa28.51■■■□□ 2.15
EDC3-202ENST00000426797 WRNQ14191 1432 aaPredicted RBP eCLIP28.48■■■□□ 2.15
EDC3-202ENST00000426797 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
EDC3-202ENST00000426797 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
EDC3-202ENST00000426797 CUX1P39880 1505 aa28.36■■■□□ 2.13
EDC3-202ENST00000426797 SYNJ1O43426 1573 aa28.36■■■□□ 2.13
EDC3-202ENST00000426797 URB2Q14146 1524 aaKnown RBP28.33■■■□□ 2.13
EDC3-202ENST00000426797 MRC2Q9UBG0 1479 aa28.29■■■□□ 2.12
EDC3-202ENST00000426797 TOP2BQ02880 1626 aa28.29■■■□□ 2.12
EDC3-202ENST00000426797 TOPBP1Q92547 1522 aa28.28■■■□□ 2.12
EDC3-202ENST00000426797 DNMBPQ6XZF7 1577 aa28.26■■■□□ 2.11
EDC3-202ENST00000426797 BIVM-ERCC5R4GMW8 1640 aa28.24■■■□□ 2.11
EDC3-202ENST00000426797 THOC2Q8NI27 1593 aaKnown RBP28.19■■■□□ 2.1
EDC3-202ENST00000426797 WDR62O43379 1518 aa28.16■■■□□ 2.1
EDC3-202ENST00000426797 FGD5Q6ZNL6 1462 aa28.15■■■□□ 2.1
EDC3-202ENST00000426797 POLA1P09884 1462 aaPredicted RBP28.1■■■□□ 2.09
EDC3-202ENST00000426797 SOGA1O94964 1423 aa28.04■■■□□ 2.08
EDC3-202ENST00000426797 RAD54L2Q9Y4B4 1467 aa28.03■■■□□ 2.08
EDC3-202ENST00000426797 CUX2O14529 1486 aa27.99■■■□□ 2.07
EDC3-202ENST00000426797 FAM9AQ8IZU1 332 aaPredicted RBP27.93■■■□□ 2.06
EDC3-202ENST00000426797 RUSC2Q8N2Y8 1516 aa27.91■■■□□ 2.06
EDC3-202ENST00000426797 TARBP1Q13395 1621 aaKnown RBP27.89■■■□□ 2.06
EDC3-202ENST00000426797 ABCA10Q8WWZ4 1543 aa27.88■■■□□ 2.05
EDC3-202ENST00000426797 IFT140Q96RY7 1462 aa27.87■■■□□ 2.05
EDC3-202ENST00000426797 TDRD9Q8NDG6 1382 aaKnown RBP27.84■■■□□ 2.05
EDC3-202ENST00000426797 KIF27Q86VH2 1401 aa27.81■■■□□ 2.04
EDC3-202ENST00000426797 WDR97A6NE52 1622 aa27.78■■■□□ 2.04
EDC3-202ENST00000426797 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
EDC3-202ENST00000426797 CSRNP3Q8WYN3 585 aa27.75■■■□□ 2.03
EDC3-202ENST00000426797 AQRO60306 1485 aaKnown RBP eCLIP27.75■■■□□ 2.035e-8■■■■□ 24.7
EDC3-202ENST00000426797 EEA1Q15075 1411 aa27.74■■■□□ 2.03
EDC3-202ENST00000426797 GAPVD1Q14C86 1478 aa27.7■■■□□ 2.02
EDC3-202ENST00000426797 IGF1RP08069 1367 aa27.68■■■□□ 2.02
EDC3-202ENST00000426797 ABCA5Q8WWZ7 1642 aa27.66■■■□□ 2.02
EDC3-202ENST00000426797 EIF4G3O43432 1585 aaKnown RBP27.6■■■□□ 2.01
EDC3-202ENST00000426797 EHMT2Q96KQ7 1210 aa27.57■■■□□ 2
EDC3-202ENST00000426797 LOC105371045A0A1W2PR82 267 aa27.56■■■□□ 2
EDC3-202ENST00000426797 GRIN2BQ13224 1484 aa27.56■■■□□ 2
EDC3-202ENST00000426797 ERICH3Q5RHP9 1530 aa27.54■■■□□ 2
EDC3-202ENST00000426797 CARMIL1Q5VZK9 1371 aa27.51■■■□□ 2
EDC3-202ENST00000426797 PBRM1Q86U86 1689 aa27.51■■□□□ 1.99
EDC3-202ENST00000426797 PRXQ9BXM0 1461 aa27.48■■□□□ 1.99
EDC3-202ENST00000426797 SNAPC4Q5SXM2 1469 aa27.43■■□□□ 1.98
EDC3-202ENST00000426797 RAPGEF2Q9Y4G8 1499 aa27.41■■□□□ 1.98
EDC3-202ENST00000426797 CUL7Q14999 1698 aa27.4■■□□□ 1.98
EDC3-202ENST00000426797 KIF21BO75037 1637 aa27.39■■□□□ 1.98
EDC3-202ENST00000426797 FHAD1B1AJZ9 1412 aa27.38■■□□□ 1.97
EDC3-202ENST00000426797 MAGI1Q96QZ7 1491 aaPredicted RBP27.37■■□□□ 1.97
EDC3-202ENST00000426797 UBTFP17480 764 aaKnown RBP27.34■■□□□ 1.97
EDC3-202ENST00000426797 ADAMTS12P58397 1594 aa27.33■■□□□ 1.97
EDC3-202ENST00000426797 GOLGA3Q08378 1498 aa27.33■■□□□ 1.97
EDC3-202ENST00000426797 FBLN2P98095 1184 aa27.33■■□□□ 1.97
EDC3-202ENST00000426797 CHMP7Q8WUX9 453 aaPredicted RBP27.32■■□□□ 1.96
EDC3-202ENST00000426797 SYNJ2O15056 1496 aa27.28■■□□□ 1.96
EDC3-202ENST00000426797 GRIN2AQ12879 1464 aa27.21■■□□□ 1.95
EDC3-202ENST00000426797 TNIKQ9UKE5 1360 aa27.18■■□□□ 1.94
EDC3-202ENST00000426797 CHD1O14646 1710 aa27.12■■□□□ 1.93
EDC3-202ENST00000426797 RANGAP1P46060 587 aaPredicted RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms