RNA–Protein interactions for RNA: ENST00000426551.5

LINC00575-201, long intergenic non-protein coding RNA 575, humanhuman

TSL 1 (best) BASIC

Gene LINC00575, Length 910 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575-201ENST00000426551 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
LINC00575-201ENST00000426551 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
LINC00575-201ENST00000426551 SENP3Q9H4L4 574 aaPredicted RBP16.91■□□□□ 0.3
LINC00575-201ENST00000426551 PHF23Q9BUL5 403 aaPredicted RBP16.66■□□□□ 0.26
LINC00575-201ENST00000426551 NISCHQ9Y2I1 1504 aa16.4■□□□□ 0.22
LINC00575-201ENST00000426551 FOXD1Q16676 465 aa15.84■□□□□ 0.13
LINC00575-201ENST00000426551 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
LINC00575-201ENST00000426551 MSH5O43196 834 aa14.93□□□□□ -0.02
LINC00575-201ENST00000426551 ABCC9O60706 1549 aa14.73□□□□□ -0.05
LINC00575-201ENST00000426551 PIAS4Q8N2W9 510 aaPredicted RBP14.72□□□□□ -0.05
LINC00575-201ENST00000426551 CCDC180Q9P1Z9 1646 aa14.69□□□□□ -0.06
LINC00575-201ENST00000426551 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
LINC00575-201ENST00000426551 PLPPR3Q6T4P5 718 aa14.52□□□□□ -0.09
LINC00575-201ENST00000426551 ADRA2BP18089 450 aa14.49□□□□□ -0.09
LINC00575-201ENST00000426551 RB1CC1Q8TDY2 1594 aa13.99□□□□□ -0.17
LINC00575-201ENST00000426551 DCAF8L2P0C7V8 631 aa13.94□□□□□ -0.18
LINC00575-201ENST00000426551 NACADO15069 1562 aa13.87□□□□□ -0.19
LINC00575-201ENST00000426551 PABPN1Q86U42 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC00575-201ENST00000426551 DNAJC5BQ9UF47 199 aa13.71□□□□□ -0.21
LINC00575-201ENST00000426551 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
LINC00575-201ENST00000426551 MYO15BQ96JP2 1530 aa13.63□□□□□ -0.23
LINC00575-201ENST00000426551 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
LINC00575-201ENST00000426551 BICRAQ9NZM4 1560 aa13.55□□□□□ -0.24
LINC00575-201ENST00000426551 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
LINC00575-201ENST00000426551 SCRIBQ14160 1630 aa13.49□□□□□ -0.25
LINC00575-201ENST00000426551 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
LINC00575-201ENST00000426551 DMRT2Q9Y5R5 561 aa13.35□□□□□ -0.27
LINC00575-201ENST00000426551 SHROOM4Q9ULL8 1493 aa13.33□□□□□ -0.28
LINC00575-201ENST00000426551 CC2D2AQ9P2K1 1620 aa13.27□□□□□ -0.29
LINC00575-201ENST00000426551 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
LINC00575-201ENST00000426551 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
LINC00575-201ENST00000426551 SCAF1Q9H7N4 1312 aaKnown RBP13.18□□□□□ -0.3
LINC00575-201ENST00000426551 CACNB1Q02641 598 aaPredicted RBP13.09□□□□□ -0.31
LINC00575-201ENST00000426551 DCAF8L1A6NGE4 600 aa12.92□□□□□ -0.34
LINC00575-201ENST00000426551 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
LINC00575-201ENST00000426551 ATAD2BQ9ULI0 1458 aa12.79□□□□□ -0.36
LINC00575-201ENST00000426551 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
LINC00575-201ENST00000426551 SMARCA2P51531 1590 aa12.76□□□□□ -0.37
LINC00575-201ENST00000426551 BAZ1AQ9NRL2 1556 aaPredicted RBP12.74□□□□□ -0.37
LINC00575-201ENST00000426551 ERCC6Q03468 1493 aa12.73□□□□□ -0.37
LINC00575-201ENST00000426551 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
LINC00575-201ENST00000426551 RNF39Q9H2S5 420 aa12.72□□□□□ -0.37
LINC00575-201ENST00000426551 BAZ1BQ9UIG0 1483 aaKnown RBP12.71□□□□□ -0.38
LINC00575-201ENST00000426551 PPP4R3CPQ6ZMV5 832 aa12.7□□□□□ -0.38
LINC00575-201ENST00000426551 HOXD11P31277 338 aaPredicted RBP12.69□□□□□ -0.38
LINC00575-201ENST00000426551 MROH2BQ7Z745 1585 aa12.67□□□□□ -0.38
LINC00575-201ENST00000426551 NESP48681 1621 aa12.65□□□□□ -0.38
LINC00575-201ENST00000426551 PEG3Q9GZU2 1588 aa12.62□□□□□ -0.39
LINC00575-201ENST00000426551 CUX2O14529 1486 aa12.61□□□□□ -0.39
LINC00575-201ENST00000426551 WIZO95785 1651 aa12.54□□□□□ -0.4
LINC00575-201ENST00000426551 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
LINC00575-201ENST00000426551 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.4
LINC00575-201ENST00000426551 DNAJC5Q9H3Z4 198 aa12.52□□□□□ -0.41
LINC00575-201ENST00000426551 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
LINC00575-201ENST00000426551 THOC2Q8NI27 1593 aaKnown RBP12.5□□□□□ -0.41
LINC00575-201ENST00000426551 KIF21AQ7Z4S6 1674 aa12.49□□□□□ -0.41
LINC00575-201ENST00000426551 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
LINC00575-201ENST00000426551 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
LINC00575-201ENST00000426551 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
LINC00575-201ENST00000426551 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
LINC00575-201ENST00000426551 MRC2Q9UBG0 1479 aa12.37□□□□□ -0.43
LINC00575-201ENST00000426551 TOP2AP11388 1531 aaKnown RBP12.36□□□□□ -0.43
LINC00575-201ENST00000426551 CEP164Q9UPV0 1460 aa12.34□□□□□ -0.43
LINC00575-201ENST00000426551 FANCD2Q9BXW9 1451 aa12.33□□□□□ -0.44
LINC00575-201ENST00000426551 WDR62O43379 1518 aa12.32□□□□□ -0.44
LINC00575-201ENST00000426551 CFTRP13569 1480 aa12.28□□□□□ -0.44
LINC00575-201ENST00000426551 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.45
LINC00575-201ENST00000426551 CCDC88BA6NC98 1476 aa12.21□□□□□ -0.45
LINC00575-201ENST00000426551 PRDM2Q13029 1718 aa12.19□□□□□ -0.46
LINC00575-201ENST00000426551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC00575-201ENST00000426551 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
LINC00575-201ENST00000426551 TOPBP1Q92547 1522 aa12.09□□□□□ -0.47
LINC00575-201ENST00000426551 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
LINC00575-201ENST00000426551 IFT140Q96RY7 1462 aa12.07□□□□□ -0.48
LINC00575-201ENST00000426551 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
LINC00575-201ENST00000426551 DNMBPQ6XZF7 1577 aa12.05□□□□□ -0.48
LINC00575-201ENST00000426551 OSCARQ8IYS5 282 aa12.04□□□□□ -0.48
LINC00575-201ENST00000426551 EIF4G3O43432 1585 aaKnown RBP12.01□□□□□ -0.49
LINC00575-201ENST00000426551 ABCC8Q09428 1581 aa12.01□□□□□ -0.49
LINC00575-201ENST00000426551 SUPT5HO00267 1087 aaKnown RBP11.98□□□□□ -0.49
LINC00575-201ENST00000426551 AQRO60306 1485 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC00575-201ENST00000426551 POLA1P09884 1462 aaPredicted RBP11.96□□□□□ -0.49
LINC00575-201ENST00000426551 TARBP1Q13395 1621 aaKnown RBP11.96□□□□□ -0.5
LINC00575-201ENST00000426551 RAD54L2Q9Y4B4 1467 aa11.95□□□□□ -0.5
LINC00575-201ENST00000426551 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
LINC00575-201ENST00000426551 FBLN2P98095 1184 aa11.93□□□□□ -0.5
LINC00575-201ENST00000426551 RIMBP3CA6NJZ7 1639 aa11.93□□□□□ -0.5
LINC00575-201ENST00000426551 RIMBP3BA6NNM3 1639 aa11.93□□□□□ -0.5
LINC00575-201ENST00000426551 RIMBP3Q9UFD9 1639 aa11.93□□□□□ -0.5
LINC00575-201ENST00000426551 FGD5Q6ZNL6 1462 aa11.92□□□□□ -0.5
LINC00575-201ENST00000426551 SOGA1O94964 1423 aa11.92□□□□□ -0.5
LINC00575-201ENST00000426551 CHD1O14646 1710 aa11.91□□□□□ -0.5
LINC00575-201ENST00000426551 CUX1P39880 1505 aa11.9□□□□□ -0.5
LINC00575-201ENST00000426551 TDRD9Q8NDG6 1382 aaKnown RBP11.9□□□□□ -0.5
LINC00575-201ENST00000426551 ARHGEF11O15085 1522 aa11.88□□□□□ -0.51
LINC00575-201ENST00000426551 POTEHQ6S545 545 aa11.88□□□□□ -0.51
LINC00575-201ENST00000426551 SNAPC4Q5SXM2 1469 aa11.87□□□□□ -0.51
LINC00575-201ENST00000426551 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
LINC00575-201ENST00000426551 CAPN15O75808 1086 aa11.82□□□□□ -0.52
LINC00575-201ENST00000426551 CYB5RLQ6IPT4 315 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms