RNA–Protein interactions for RNA: ENST00000426514.2

SPHK2-203, Transcript of sphingosine kinase 2, humanhuman

TSL 1 (best)

Gene SPHK2, Length 1,493 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2-203ENST00000426514 NISCHQ9Y2I1 1504 aa54.25■■■■■ 6.27
SPHK2-203ENST00000426514 CCDC180Q9P1Z9 1646 aa48.26■■■■■ 5.32
SPHK2-203ENST00000426514 ABCC9O60706 1549 aa47.19■■■■■ 5.14
SPHK2-203ENST00000426514 RB1CC1Q8TDY2 1594 aa45.39■■■■■ 4.86
SPHK2-203ENST00000426514 DCAF8L2P0C7V8 631 aa45.36■■■■■ 4.85
SPHK2-203ENST00000426514 NACADO15069 1562 aa45.32■■■■■ 4.85
SPHK2-203ENST00000426514 ZCCHC6Q5VYS8 1495 aaKnown RBP45.18■■■■■ 4.82
SPHK2-203ENST00000426514 MYO15BQ96JP2 1530 aa45.02■■■■■ 4.8
SPHK2-203ENST00000426514 DCAF1Q9Y4B6 1507 aa44.85■■■■■ 4.77
SPHK2-203ENST00000426514 UNC13AQ9UPW8 1703 aa44.47■■■■■ 4.71
SPHK2-203ENST00000426514 PABPN1Q86U42 306 aaKnown RBP eCLIP44.08■■■■■ 4.65
SPHK2-203ENST00000426514 SCRIBQ14160 1630 aa44.06■■■■■ 4.64
SPHK2-203ENST00000426514 BICRAQ9NZM4 1560 aa44.02■■■■■ 4.64
SPHK2-203ENST00000426514 SHROOM4Q9ULL8 1493 aa43.49■■■■■ 4.55
SPHK2-203ENST00000426514 DNAJC5BQ9UF47 199 aa43.25■■■■■ 4.51
SPHK2-203ENST00000426514 EIF4G1Q04637 1599 aaKnown RBP42.85■■■■■ 4.45
SPHK2-203ENST00000426514 CC2D2AQ9P2K1 1620 aa42.69■■■■■ 4.43
SPHK2-203ENST00000426514 CECR2Q9BXF3 1484 aa42.37■■■■■ 4.37
SPHK2-203ENST00000426514 SMARCA4P51532 1647 aa42.12■■■■■ 4.33
SPHK2-203ENST00000426514 BAZ1AQ9NRL2 1556 aaPredicted RBP42.06■■■■■ 4.32
SPHK2-203ENST00000426514 ATAD2BQ9ULI0 1458 aa41.84■■■■■ 4.29
SPHK2-203ENST00000426514 MROH2BQ7Z745 1585 aa41.82■■■■■ 4.29
SPHK2-203ENST00000426514 SMARCA2P51531 1590 aa41.81■■■■■ 4.28
SPHK2-203ENST00000426514 NCAPD3P42695 1498 aa41.79■■■■■ 4.28
SPHK2-203ENST00000426514 PEG3Q9GZU2 1588 aa41.67■■■■■ 4.26
SPHK2-203ENST00000426514 HMGXB3Q12766 1538 aa41.62■■■■■ 4.25
SPHK2-203ENST00000426514 BAZ1BQ9UIG0 1483 aaKnown RBP41.52■■■■■ 4.24
SPHK2-203ENST00000426514 WIZO95785 1651 aa41.43■■■■■ 4.22
SPHK2-203ENST00000426514 RSF1Q96T23 1441 aaPredicted RBP41.33■■■■■ 4.21
SPHK2-203ENST00000426514 TOP2AP11388 1531 aaKnown RBP40.94■■■■■ 4.14
SPHK2-203ENST00000426514 NESP48681 1621 aa40.84■■■■■ 4.13
SPHK2-203ENST00000426514 LAMC3Q9Y6N6 1575 aa40.73■■■■■ 4.11
SPHK2-203ENST00000426514 ERCC6Q03468 1493 aa40.66■■■■■ 4.1
SPHK2-203ENST00000426514 CADPSQ9ULU8 1353 aa40.58■■■■■ 4.09
SPHK2-203ENST00000426514 CCDC88BA6NC98 1476 aa40.45■■■■■ 4.07
SPHK2-203ENST00000426514 PDS5BQ9NTI5 1447 aa40.43■■■■■ 4.06
SPHK2-203ENST00000426514 KIF21AQ7Z4S6 1674 aa40.42■■■■■ 4.06
SPHK2-203ENST00000426514 SUPT5HO00267 1087 aaKnown RBP40.36■■■■■ 4.05
SPHK2-203ENST00000426514 CFTRP13569 1480 aa40.35■■■■■ 4.05
SPHK2-203ENST00000426514 THOC2Q8NI27 1593 aaKnown RBP40.22■■■■■ 4.03
SPHK2-203ENST00000426514 PRDM2Q13029 1718 aa40.18■■■■■ 4.02
SPHK2-203ENST00000426514 CUX2O14529 1486 aa40.18■■■■■ 4.02
SPHK2-203ENST00000426514 FANCD2Q9BXW9 1451 aa40.15■■■■■ 4.02
SPHK2-203ENST00000426514 CEP164Q9UPV0 1460 aa40.1■■■■■ 4.01
SPHK2-203ENST00000426514 MRC2Q9UBG0 1479 aa40.03■■■■■ 4
SPHK2-203ENST00000426514 WDR62O43379 1518 aa39.89■■■■□ 3.98
SPHK2-203ENST00000426514 URB2Q14146 1524 aaKnown RBP39.76■■■■□ 3.95
SPHK2-203ENST00000426514 TOPBP1Q92547 1522 aa39.52■■■■□ 3.92
SPHK2-203ENST00000426514 ABCC8Q09428 1581 aa39.49■■■■□ 3.91
SPHK2-203ENST00000426514 DNMBPQ6XZF7 1577 aa39.48■■■■□ 3.91
SPHK2-203ENST00000426514 CUX1P39880 1505 aa39.24■■■■□ 3.87
SPHK2-203ENST00000426514 IFT140Q96RY7 1462 aa39.24■■■■□ 3.87
SPHK2-203ENST00000426514 POLA1P09884 1462 aaPredicted RBP39.18■■■■□ 3.86
SPHK2-203ENST00000426514 FGD5Q6ZNL6 1462 aa39.1■■■■□ 3.85
SPHK2-203ENST00000426514 TARBP1Q13395 1621 aaKnown RBP39.1■■■■□ 3.85
SPHK2-203ENST00000426514 ZNF608Q9ULD9 1512 aaPredicted RBP39.08■■■■□ 3.85
SPHK2-203ENST00000426514 RAD54L2Q9Y4B4 1467 aa39.02■■■■□ 3.84
SPHK2-203ENST00000426514 SOGA1O94964 1423 aa39.01■■■■□ 3.84
SPHK2-203ENST00000426514 WRNQ14191 1432 aaPredicted RBP eCLIP38.98■■■■□ 3.83
SPHK2-203ENST00000426514 EIF4G3O43432 1585 aaKnown RBP38.97■■■■□ 3.83
SPHK2-203ENST00000426514 BIVM-ERCC5R4GMW8 1640 aa38.93■■■■□ 3.82
SPHK2-203ENST00000426514 SYNJ1O43426 1573 aa38.93■■■■□ 3.82
SPHK2-203ENST00000426514 TOP2BQ02880 1626 aa38.92■■■■□ 3.82
SPHK2-203ENST00000426514 DNAJC5Q9H3Z4 198 aa38.91■■■■□ 3.82
SPHK2-203ENST00000426514 AQRO60306 1485 aaKnown RBP eCLIP38.87■■■■□ 3.81
SPHK2-203ENST00000426514 WDR97A6NE52 1622 aa38.81■■■■□ 3.8
SPHK2-203ENST00000426514 TDRD9Q8NDG6 1382 aaKnown RBP38.8■■■■□ 3.8
SPHK2-203ENST00000426514 ABCA10Q8WWZ4 1543 aa38.7■■■■□ 3.79
SPHK2-203ENST00000426514 ABCA5Q8WWZ7 1642 aa38.58■■■■□ 3.77
SPHK2-203ENST00000426514 PBRM1Q86U86 1689 aa38.57■■■■□ 3.77
SPHK2-203ENST00000426514 GAPVD1Q14C86 1478 aa38.57■■■■□ 3.77
SPHK2-203ENST00000426514 GRIN2BQ13224 1484 aa38.55■■■■□ 3.76
SPHK2-203ENST00000426514 OSCARQ8IYS5 282 aa38.53■■■■□ 3.76
SPHK2-203ENST00000426514 CHD1O14646 1710 aa38.53■■■■□ 3.76
SPHK2-203ENST00000426514 SNAPC4Q5SXM2 1469 aa38.51■■■■□ 3.76
SPHK2-203ENST00000426514 MAGI1Q96QZ7 1491 aaPredicted RBP38.44■■■■□ 3.74
SPHK2-203ENST00000426514 FBLN2P98095 1184 aa38.41■■■■□ 3.74
SPHK2-203ENST00000426514 SYNJ2O15056 1496 aa38.29■■■■□ 3.72
SPHK2-203ENST00000426514 CHMP7Q8WUX9 453 aaPredicted RBP38.28■■■■□ 3.72
SPHK2-203ENST00000426514 ERICH3Q5RHP9 1530 aa38.25■■■■□ 3.71
SPHK2-203ENST00000426514 ADAMTS12P58397 1594 aa38.21■■■■□ 3.71
SPHK2-203ENST00000426514 KIF27Q86VH2 1401 aa38.16■■■■□ 3.7
SPHK2-203ENST00000426514 FHAD1B1AJZ9 1412 aa38.11■■■■□ 3.69
SPHK2-203ENST00000426514 TRIM41Q8WV44 630 aa38.09■■■■□ 3.69
SPHK2-203ENST00000426514 GRIN2AQ12879 1464 aa38.07■■■■□ 3.68
SPHK2-203ENST00000426514 CLASP1Q7Z460 1538 aa38.02■■■■□ 3.68
SPHK2-203ENST00000426514 IGF1RP08069 1367 aa37.99■■■■□ 3.67
SPHK2-203ENST00000426514 RIMBP3CA6NJZ7 1639 aa37.97■■■■□ 3.67
SPHK2-203ENST00000426514 RIMBP3BA6NNM3 1639 aa37.97■■■■□ 3.67
SPHK2-203ENST00000426514 RIMBP3Q9UFD9 1639 aa37.97■■■■□ 3.67
SPHK2-203ENST00000426514 CUL7Q14999 1698 aa37.95■■■■□ 3.67
SPHK2-203ENST00000426514 ARHGEF11O15085 1522 aa37.93■■■■□ 3.66
SPHK2-203ENST00000426514 CEP170Q5SW79 1584 aa37.9■■■■□ 3.66
SPHK2-203ENST00000426514 NUP160Q12769 1436 aa37.87■■■■□ 3.65
SPHK2-203ENST00000426514 RUSC2Q8N2Y8 1516 aa37.86■■■■□ 3.65
SPHK2-203ENST00000426514 CARMIL1Q5VZK9 1371 aa37.77■■■■□ 3.64
SPHK2-203ENST00000426514 CHIC1Q5VXU3 224 aa37.64■■■■□ 3.62
SPHK2-203ENST00000426514 SHROOM2Q13796 1616 aa37.63■■■■□ 3.61
SPHK2-203ENST00000426514 ARAP1Q96P48 1450 aa37.62■■■■□ 3.61
SPHK2-203ENST00000426514 CYB5RLQ6IPT4 315 aa37.58■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms