RNA–Protein interactions for RNA: ENST00000426371.2

HNRNPA1P40-201, Transcript of heterogeneous nuclear ribonucleoprotein A1 pseudogene 40, humanhuman

BASIC

Gene HNRNPA1P40, Length 1,278 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1P40-201ENST00000426371 AEBP2Q6ZN18 517 aaPredicted RBP39.96■■■■□ 3.99
HNRNPA1P40-201ENST00000426371 NISCHQ9Y2I1 1504 aa39.75■■■■□ 3.95
HNRNPA1P40-201ENST00000426371 CHIC1Q5VXU3 224 aa38.24■■■■□ 3.71
HNRNPA1P40-201ENST00000426371 ABCC9O60706 1549 aa35.77■■■■□ 3.32
HNRNPA1P40-201ENST00000426371 CCDC180Q9P1Z9 1646 aa35.68■■■■□ 3.3
HNRNPA1P40-201ENST00000426371 RB1CC1Q8TDY2 1594 aa34.03■■■■□ 3.04
HNRNPA1P40-201ENST00000426371 SENP3Q9H4L4 574 aaPredicted RBP34■■■■□ 3.03
HNRNPA1P40-201ENST00000426371 DCAF8L2P0C7V8 631 aa33.92■■■■□ 3.02
HNRNPA1P40-201ENST00000426371 NACADO15069 1562 aa33.76■■■□□ 2.99
HNRNPA1P40-201ENST00000426371 PHF23Q9BUL5 403 aaPredicted RBP33.62■■■□□ 2.97
HNRNPA1P40-201ENST00000426371 DNAJC5BQ9UF47 199 aa33.48■■■□□ 2.95
HNRNPA1P40-201ENST00000426371 PABPN1Q86U42 306 aaKnown RBP eCLIP33.36■■■□□ 2.93
HNRNPA1P40-201ENST00000426371 UNC13AQ9UPW8 1703 aa33.24■■■□□ 2.91
HNRNPA1P40-201ENST00000426371 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
HNRNPA1P40-201ENST00000426371 BICRAQ9NZM4 1560 aa32.91■■■□□ 2.86
HNRNPA1P40-201ENST00000426371 ZCCHC6Q5VYS8 1495 aaKnown RBP32.88■■■□□ 2.85
HNRNPA1P40-201ENST00000426371 DCAF1Q9Y4B6 1507 aa32.77■■■□□ 2.84
HNRNPA1P40-201ENST00000426371 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
HNRNPA1P40-201ENST00000426371 SHROOM4Q9ULL8 1493 aa32.47■■■□□ 2.79
HNRNPA1P40-201ENST00000426371 CC2D2AQ9P2K1 1620 aa32.27■■■□□ 2.76
HNRNPA1P40-201ENST00000426371 CECR2Q9BXF3 1484 aa32.2■■■□□ 2.75
HNRNPA1P40-201ENST00000426371 EIF4G1Q04637 1599 aaKnown RBP32.17■■■□□ 2.74
HNRNPA1P40-201ENST00000426371 FOXD1Q16676 465 aa31.67■■■□□ 2.66
HNRNPA1P40-201ENST00000426371 NCAPD3P42695 1498 aa31.12■■■□□ 2.57
HNRNPA1P40-201ENST00000426371 ATAD2BQ9ULI0 1458 aa31.04■■■□□ 2.56
HNRNPA1P40-201ENST00000426371 SMARCA4P51532 1647 aa31.02■■■□□ 2.56
HNRNPA1P40-201ENST00000426371 SMARCA2P51531 1590 aa31■■■□□ 2.55
HNRNPA1P40-201ENST00000426371 ERCC6Q03468 1493 aa30.96■■■□□ 2.55
HNRNPA1P40-201ENST00000426371 BAZ1AQ9NRL2 1556 aaPredicted RBP30.9■■■□□ 2.54
HNRNPA1P40-201ENST00000426371 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
HNRNPA1P40-201ENST00000426371 BAZ1BQ9UIG0 1483 aaKnown RBP30.82■■■□□ 2.52
HNRNPA1P40-201ENST00000426371 DNAJC5Q9H3Z4 198 aa30.81■■■□□ 2.52
HNRNPA1P40-201ENST00000426371 CUX2O14529 1486 aa30.77■■■□□ 2.52
HNRNPA1P40-201ENST00000426371 PLPPR3Q6T4P5 718 aa30.69■■■□□ 2.5
HNRNPA1P40-201ENST00000426371 NESP48681 1621 aa30.68■■■□□ 2.5
HNRNPA1P40-201ENST00000426371 PEG3Q9GZU2 1588 aa30.64■■■□□ 2.5
HNRNPA1P40-201ENST00000426371 MROH2BQ7Z745 1585 aa30.63■■■□□ 2.49
HNRNPA1P40-201ENST00000426371 LAMC3Q9Y6N6 1575 aa30.48■■■□□ 2.47
HNRNPA1P40-201ENST00000426371 PDS5BQ9NTI5 1447 aa30.37■■■□□ 2.45
HNRNPA1P40-201ENST00000426371 WIZO95785 1651 aa30.33■■■□□ 2.45
HNRNPA1P40-201ENST00000426371 KIF21AQ7Z4S6 1674 aa30.32■■■□□ 2.44
HNRNPA1P40-201ENST00000426371 THOC2Q8NI27 1593 aaKnown RBP30.3■■■□□ 2.44
HNRNPA1P40-201ENST00000426371 CADPSQ9ULU8 1353 aa30.24■■■□□ 2.43
HNRNPA1P40-201ENST00000426371 MRC2Q9UBG0 1479 aa30.03■■■□□ 2.4
HNRNPA1P40-201ENST00000426371 RSF1Q96T23 1441 aaPredicted RBP30■■■□□ 2.39
HNRNPA1P40-201ENST00000426371 CEP164Q9UPV0 1460 aa29.95■■■□□ 2.39
HNRNPA1P40-201ENST00000426371 FANCD2Q9BXW9 1451 aa29.9■■■□□ 2.38
HNRNPA1P40-201ENST00000426371 WDR62O43379 1518 aa29.9■■■□□ 2.38
HNRNPA1P40-201ENST00000426371 TOP2AP11388 1531 aaKnown RBP29.89■■■□□ 2.38
HNRNPA1P40-201ENST00000426371 PPP6R1Q9UPN7 881 aa29.87■■■□□ 2.37
HNRNPA1P40-201ENST00000426371 CFTRP13569 1480 aa29.83■■■□□ 2.37
HNRNPA1P40-201ENST00000426371 ADRA2BP18089 450 aa29.76■■■□□ 2.35
HNRNPA1P40-201ENST00000426371 PIAS4Q8N2W9 510 aaPredicted RBP29.64■■■□□ 2.34
HNRNPA1P40-201ENST00000426371 TRIM41Q8WV44 630 aa29.63■■■□□ 2.33
HNRNPA1P40-201ENST00000426371 PRDM2Q13029 1718 aa29.62■■■□□ 2.33
HNRNPA1P40-201ENST00000426371 URB2Q14146 1524 aaKnown RBP29.6■■■□□ 2.33
HNRNPA1P40-201ENST00000426371 CCDC88BA6NC98 1476 aa29.59■■■□□ 2.33
HNRNPA1P40-201ENST00000426371 OSCARQ8IYS5 282 aa29.52■■■□□ 2.32
HNRNPA1P40-201ENST00000426371 MSH5O43196 834 aa29.5■■■□□ 2.31
HNRNPA1P40-201ENST00000426371 IFT140Q96RY7 1462 aa29.33■■■□□ 2.29
HNRNPA1P40-201ENST00000426371 ABCC8Q09428 1581 aa29.31■■■□□ 2.28
HNRNPA1P40-201ENST00000426371 TOPBP1Q92547 1522 aa29.3■■■□□ 2.28
HNRNPA1P40-201ENST00000426371 ZNF608Q9ULD9 1512 aaPredicted RBP29.25■■■□□ 2.27
HNRNPA1P40-201ENST00000426371 DNMBPQ6XZF7 1577 aa29.21■■■□□ 2.27
HNRNPA1P40-201ENST00000426371 EIF4G3O43432 1585 aaKnown RBP29.1■■■□□ 2.25
HNRNPA1P40-201ENST00000426371 FBLN2P98095 1184 aa29.06■■■□□ 2.24
HNRNPA1P40-201ENST00000426371 AQRO60306 1485 aaKnown RBP eCLIP29.04■■■□□ 2.24
HNRNPA1P40-201ENST00000426371 RIMBP3CA6NJZ7 1639 aa29.02■■■□□ 2.24
HNRNPA1P40-201ENST00000426371 RIMBP3BA6NNM3 1639 aa29.02■■■□□ 2.24
HNRNPA1P40-201ENST00000426371 RIMBP3Q9UFD9 1639 aa29.02■■■□□ 2.24
HNRNPA1P40-201ENST00000426371 TARBP1Q13395 1621 aaKnown RBP29.01■■■□□ 2.23
HNRNPA1P40-201ENST00000426371 POLA1P09884 1462 aaPredicted RBP28.99■■■□□ 2.23
HNRNPA1P40-201ENST00000426371 SOGA1O94964 1423 aa28.96■■■□□ 2.23
HNRNPA1P40-201ENST00000426371 CHD1O14646 1710 aa28.94■■■□□ 2.22
HNRNPA1P40-201ENST00000426371 SUPT5HO00267 1087 aaKnown RBP28.94■■■□□ 2.22
HNRNPA1P40-201ENST00000426371 RAD54L2Q9Y4B4 1467 aa28.93■■■□□ 2.22
HNRNPA1P40-201ENST00000426371 ARHGEF11O15085 1522 aa28.89■■■□□ 2.22
HNRNPA1P40-201ENST00000426371 TDRD9Q8NDG6 1382 aaKnown RBP28.89■■■□□ 2.22
HNRNPA1P40-201ENST00000426371 CYB5RLQ6IPT4 315 aa28.86■■■□□ 2.21
HNRNPA1P40-201ENST00000426371 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
HNRNPA1P40-201ENST00000426371 CHMP7Q8WUX9 453 aaPredicted RBP28.79■■■□□ 2.2
HNRNPA1P40-201ENST00000426371 CUX1P39880 1505 aa28.78■■■□□ 2.2
HNRNPA1P40-201ENST00000426371 WDR97A6NE52 1622 aa28.73■■■□□ 2.19
HNRNPA1P40-201ENST00000426371 SNAPC4Q5SXM2 1469 aa28.72■■■□□ 2.19
HNRNPA1P40-201ENST00000426371 GRIN2BQ13224 1484 aa28.66■■■□□ 2.18
HNRNPA1P40-201ENST00000426371 TRHP20396 242 aaPredicted RBP28.64■■■□□ 2.18
HNRNPA1P40-201ENST00000426371 MAGI1Q96QZ7 1491 aaPredicted RBP28.64■■■□□ 2.17
HNRNPA1P40-201ENST00000426371 SYNJ1O43426 1573 aa28.61■■■□□ 2.17
HNRNPA1P40-201ENST00000426371 GAPVD1Q14C86 1478 aa28.59■■■□□ 2.17
HNRNPA1P40-201ENST00000426371 ARAP1Q96P48 1450 aa28.58■■■□□ 2.17
HNRNPA1P40-201ENST00000426371 PBRM1Q86U86 1689 aa28.58■■■□□ 2.16
HNRNPA1P40-201ENST00000426371 SYNJ2O15056 1496 aa28.55■■■□□ 2.16
HNRNPA1P40-201ENST00000426371 CLASP1Q7Z460 1538 aa28.49■■■□□ 2.15
HNRNPA1P40-201ENST00000426371 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
HNRNPA1P40-201ENST00000426371 WRNQ14191 1432 aaPredicted RBP eCLIP28.45■■■□□ 2.15
HNRNPA1P40-201ENST00000426371 ABCA5Q8WWZ7 1642 aa28.41■■■□□ 2.14
HNRNPA1P40-201ENST00000426371 TOP2BQ02880 1626 aa28.34■■■□□ 2.13
HNRNPA1P40-201ENST00000426371 BIVM-ERCC5R4GMW8 1640 aa28.33■■■□□ 2.13
HNRNPA1P40-201ENST00000426371 GRIN2AQ12879 1464 aa28.27■■■□□ 2.12
HNRNPA1P40-201ENST00000426371 POTEDQ86YR6 584 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms