RNA–Protein interactions for RNA: ENST00000425416.6

LPIN1-207, Transcript of lipin 1, humanhuman

TSL 2 BASIC

Gene LPIN1, Length 5,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-207ENST00000425416 PELP1Q8IZL8 1130 aaKnown RBP16.07■□□□□ 0.16
LPIN1-207ENST00000425416 MYT1Q01538 1121 aa15.46■□□□□ 0.06
LPIN1-207ENST00000425416 CCER1Q8TC90 406 aaPredicted RBP15.27■□□□□ 0.04
LPIN1-207ENST00000425416 ERICH6Q7L0X2 663 aa15.14■□□□□ 0.01
LPIN1-207ENST00000425416 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
LPIN1-207ENST00000425416 NISCHQ9Y2I1 1504 aa14.9□□□□□ -0.02
LPIN1-207ENST00000425416 YTHDC1Q96MU7 727 aaKnown RBP14.85□□□□□ -0.03
LPIN1-207ENST00000425416 CENPBP07199 599 aaPredicted RBP14.76□□□□□ -0.05
LPIN1-207ENST00000425416 FAM9AQ8IZU1 332 aaPredicted RBP14.7□□□□□ -0.06
LPIN1-207ENST00000425416 APLP2Q06481 763 aa14.64□□□□□ -0.07
LPIN1-207ENST00000425416 ZEB1P37275 1124 aaPredicted RBP14.52□□□□□ -0.08
LPIN1-207ENST00000425416 NEFLP07196 543 aa14.51□□□□□ -0.09
LPIN1-207ENST00000425416 TTBK1Q5TCY1 1321 aaPredicted RBP14.46□□□□□ -0.09
LPIN1-207ENST00000425416 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
LPIN1-207ENST00000425416 SUPT5HO00267 1087 aaKnown RBP14.24□□□□□ -0.13
LPIN1-207ENST00000425416 RTL5Q5HYW3 569 aaPredicted RBP14.02□□□□□ -0.17
LPIN1-207ENST00000425416 ZNF316A6NFI3 1004 aaPredicted RBP13.91□□□□□ -0.18
LPIN1-207ENST00000425416 PCGF6Q9BYE7 350 aa13.86□□□□□ -0.19
LPIN1-207ENST00000425416 EHMT2Q96KQ7 1210 aa13.76□□□□□ -0.21
LPIN1-207ENST00000425416 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
LPIN1-207ENST00000425416 SHROOM4Q9ULL8 1493 aa13.69□□□□□ -0.22
LPIN1-207ENST00000425416 CLSPNQ9HAW4 1339 aa13.68□□□□□ -0.22
LPIN1-207ENST00000425416 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
LPIN1-207ENST00000425416 ZBTB47Q9UFB7 747 aaPredicted RBP13.51□□□□□ -0.25
LPIN1-207ENST00000425416 ATP1B4Q9UN42 357 aaPredicted RBP13.51□□□□□ -0.25
LPIN1-207ENST00000425416 ANP32BQ92688 251 aaKnown RBP13.48□□□□□ -0.25
LPIN1-207ENST00000425416 TRIM41Q8WV44 630 aa13.42□□□□□ -0.26
LPIN1-207ENST00000425416 NEFMP07197 916 aa13.4□□□□□ -0.26
LPIN1-207ENST00000425416 UBTFP17480 764 aaKnown RBP13.39□□□□□ -0.27
LPIN1-207ENST00000425416 CDK11AQ9UQ88 783 aaPredicted RBP13.39□□□□□ -0.27
LPIN1-207ENST00000425416 TRIM26Q12899 539 aaPredicted RBP13.37□□□□□ -0.27
LPIN1-207ENST00000425416 POLR3GLQ9BT43 218 aa13.28□□□□□ -0.28
LPIN1-207ENST00000425416 ANP32AP39687 249 aaKnown RBP13.27□□□□□ -0.28
LPIN1-207ENST00000425416 HRCP23327 699 aa13.26□□□□□ -0.29
LPIN1-207ENST00000425416 RANGAP1P46060 587 aaPredicted RBP13.24□□□□□ -0.29
LPIN1-207ENST00000425416 TNNT2P45379 298 aaPredicted RBP13.18□□□□□ -0.3
LPIN1-207ENST00000425416 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
LPIN1-207ENST00000425416 EIF5BO60841 1220 aaKnown RBP13.15□□□□□ -0.3
LPIN1-207ENST00000425416 CDK11BP21127 795 aaKnown RBP13.14□□□□□ -0.31
LPIN1-207ENST00000425416 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
LPIN1-207ENST00000425416 UPF2Q9HAU5 1272 aaKnown RBP13.09□□□□□ -0.31
LPIN1-207ENST00000425416 ANP32CO43423 234 aa13.07□□□□□ -0.32
LPIN1-207ENST00000425416 DIEXFQ68CQ4 756 aaKnown RBP13.06□□□□□ -0.32
LPIN1-207ENST00000425416 ANP32EQ9BTT0 268 aa13.06□□□□□ -0.32
LPIN1-207ENST00000425416 TRIM44Q96DX7 344 aaPredicted RBP13.05□□□□□ -0.32
LPIN1-207ENST00000425416 HSP90AA1P07900 732 aaKnown RBP13.01□□□□□ -0.33
LPIN1-207ENST00000425416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
LPIN1-207ENST00000425416 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
LPIN1-207ENST00000425416 NCLP19338 710 aaKnown RBP12.91□□□□□ -0.34
LPIN1-207ENST00000425416 ITGAEP38570 1179 aa12.89□□□□□ -0.35
LPIN1-207ENST00000425416 GTF3C3Q9Y5Q9 886 aa12.86□□□□□ -0.35
LPIN1-207ENST00000425416 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.83□□□□□ -0.36
LPIN1-207ENST00000425416 CNGB1Q14028 1251 aaPredicted RBP12.83□□□□□ -0.36
LPIN1-207ENST00000425416 DDRGK1Q96HY6 314 aa12.81□□□□□ -0.36
LPIN1-207ENST00000425416 BCANQ96GW7 911 aa12.81□□□□□ -0.36
LPIN1-207ENST00000425416 GOLGA6L22H0YM25 854 aa12.8□□□□□ -0.36
LPIN1-207ENST00000425416 TRIM52Q96A61 297 aa12.78□□□□□ -0.36
LPIN1-207ENST00000425416 SLC24A1O60721 1099 aa12.77□□□□□ -0.37
LPIN1-207ENST00000425416 NPM2Q86SE8 214 aaKnown RBP12.76□□□□□ -0.37
LPIN1-207ENST00000425416 GOLGA6L6A8MZA4 724 aa12.76□□□□□ -0.37
LPIN1-207ENST00000425416 BECN1Q14457 450 aa12.76□□□□□ -0.37
LPIN1-207ENST00000425416 ERICH6BQ5W0A0 696 aa12.75□□□□□ -0.37
LPIN1-207ENST00000425416 ACIN1Q9UKV3 1341 aaKnown RBP12.75□□□□□ -0.37
LPIN1-207ENST00000425416 L1TD1Q5T7N2 865 aaKnown RBP12.74□□□□□ -0.37
LPIN1-207ENST00000425416 ZRSR1Q15695 479 aaKnown RBP12.71□□□□□ -0.37
LPIN1-207ENST00000425416 ABCC9O60706 1549 aa12.71□□□□□ -0.37
LPIN1-207ENST00000425416 NRDCO43847 1150 aa12.7□□□□□ -0.38
LPIN1-207ENST00000425416 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
LPIN1-207ENST00000425416 MYH16Q9H6N6 1097 aa12.67□□□□□ -0.38
LPIN1-207ENST00000425416 CHIC1Q5VXU3 224 aa12.67□□□□□ -0.38
LPIN1-207ENST00000425416 PPARGC1BQ86YN6 1023 aaKnown RBP12.66□□□□□ -0.38
LPIN1-207ENST00000425416 PTMAP06454 111 aaKnown RBP12.64□□□□□ -0.39
LPIN1-207ENST00000425416 PPM1GO15355 546 aaPredicted RBP12.61□□□□□ -0.39
LPIN1-207ENST00000425416 USP35Q9P2H5 1018 aa12.61□□□□□ -0.39
LPIN1-207ENST00000425416 NEUROD1Q13562 356 aa12.59□□□□□ -0.39
LPIN1-207ENST00000425416 CCDC180Q9P1Z9 1646 aa12.59□□□□□ -0.39
LPIN1-207ENST00000425416 CHAF1AQ13111 956 aaPredicted RBP12.59□□□□□ -0.39
LPIN1-207ENST00000425416 DNTTIP2Q5QJE6 756 aaKnown RBP12.59□□□□□ -0.39
LPIN1-207ENST00000425416 CASC1Q6TDU7 716 aa12.57□□□□□ -0.4
LPIN1-207ENST00000425416 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
LPIN1-207ENST00000425416 PRKCSHP14314 528 aaPredicted RBP12.56□□□□□ -0.4
LPIN1-207ENST00000425416 NPM1P06748 294 aaKnown RBP eCLIP12.56□□□□□ -0.4
LPIN1-207ENST00000425416 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
LPIN1-207ENST00000425416 ESF1Q9H501 851 aaKnown RBP12.56□□□□□ -0.4
LPIN1-207ENST00000425416 ZNF326Q5BKZ1 582 aaKnown RBP12.54□□□□□ -0.4
LPIN1-207ENST00000425416 FKBP8Q14318 412 aa12.52□□□□□ -0.4
LPIN1-207ENST00000425416 NAP1L5Q96NT1 182 aaPredicted RBP12.51□□□□□ -0.41
LPIN1-207ENST00000425416 PTMSP20962 102 aa12.5□□□□□ -0.41
LPIN1-207ENST00000425416 NBR1Q14596 966 aa12.5□□□□□ -0.41
LPIN1-207ENST00000425416 CALRP27797 417 aaKnown RBP12.49□□□□□ -0.41
LPIN1-207ENST00000425416 CHMP4BQ9H444 224 aaKnown RBP12.47□□□□□ -0.41
LPIN1-207ENST00000425416 CFAP44Q96MT7 982 aa12.46□□□□□ -0.41
LPIN1-207ENST00000425416 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.42
LPIN1-207ENST00000425416 WDR43Q15061 677 aaKnown RBP eCLIP12.45□□□□□ -0.42
LPIN1-207ENST00000425416 RB1CC1Q8TDY2 1594 aa12.44□□□□□ -0.42
LPIN1-207ENST00000425416 ARID4BQ4LE39 1312 aaPredicted RBP12.43□□□□□ -0.42
LPIN1-207ENST00000425416 TNNT3P45378 269 aaPredicted RBP12.42□□□□□ -0.42
LPIN1-207ENST00000425416 KIAA2012Q0VF49 1180 aa12.41□□□□□ -0.42
LPIN1-207ENST00000425416 SETQ01105 290 aaPredicted RBP12.4□□□□□ -0.42
LPIN1-207ENST00000425416 FBLN2P98095 1184 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms