RNA–Protein interactions for RNA: ENST00000424645.5

NCSTN-204, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-204ENST00000424645 NISCHQ9Y2I1 1504 aa24.28■■□□□ 1.48
NCSTN-204ENST00000424645 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
NCSTN-204ENST00000424645 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
NCSTN-204ENST00000424645 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
NCSTN-204ENST00000424645 ABCC9O60706 1549 aa20.73■□□□□ 0.91
NCSTN-204ENST00000424645 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
NCSTN-204ENST00000424645 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
NCSTN-204ENST00000424645 NACADO15069 1562 aa20.21■□□□□ 0.83
NCSTN-204ENST00000424645 DCAF1Q9Y4B6 1507 aa20.18■□□□□ 0.82
NCSTN-204ENST00000424645 RB1CC1Q8TDY2 1594 aa20.15■□□□□ 0.82
NCSTN-204ENST00000424645 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.81
NCSTN-204ENST00000424645 SENP3Q9H4L4 574 aaPredicted RBP19.61■□□□□ 0.73
NCSTN-204ENST00000424645 UNC13AQ9UPW8 1703 aa19.54■□□□□ 0.72
NCSTN-204ENST00000424645 SCRIBQ14160 1630 aa19.51■□□□□ 0.71
NCSTN-204ENST00000424645 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
NCSTN-204ENST00000424645 BICRAQ9NZM4 1560 aa19.44■□□□□ 0.7
NCSTN-204ENST00000424645 PABPN1Q86U42 306 aaKnown RBP eCLIP19.41■□□□□ 0.7
NCSTN-204ENST00000424645 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
NCSTN-204ENST00000424645 EIF4G1Q04637 1599 aaKnown RBP18.95■□□□□ 0.62
NCSTN-204ENST00000424645 DNAJC5BQ9UF47 199 aa18.83■□□□□ 0.6
NCSTN-204ENST00000424645 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
NCSTN-204ENST00000424645 CECR2Q9BXF3 1484 aa18.81■□□□□ 0.6
NCSTN-204ENST00000424645 CC2D2AQ9P2K1 1620 aa18.79■□□□□ 0.6
NCSTN-204ENST00000424645 SMARCA4P51532 1647 aa18.75■□□□□ 0.59
NCSTN-204ENST00000424645 SMARCA2P51531 1590 aa18.67■□□□□ 0.58
NCSTN-204ENST00000424645 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
NCSTN-204ENST00000424645 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.58
NCSTN-204ENST00000424645 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.58
NCSTN-204ENST00000424645 ATAD2BQ9ULI0 1458 aa18.64■□□□□ 0.57
NCSTN-204ENST00000424645 RSF1Q96T23 1441 aaPredicted RBP18.56■□□□□ 0.56
NCSTN-204ENST00000424645 HMGXB3Q12766 1538 aa18.55■□□□□ 0.56
NCSTN-204ENST00000424645 BAZ1BQ9UIG0 1483 aaKnown RBP18.49■□□□□ 0.55
NCSTN-204ENST00000424645 WIZO95785 1651 aa18.43■□□□□ 0.54
NCSTN-204ENST00000424645 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.52
NCSTN-204ENST00000424645 SUPT5HO00267 1087 aaKnown RBP18.19■□□□□ 0.5
NCSTN-204ENST00000424645 FOXD1Q16676 465 aa18.13■□□□□ 0.49
NCSTN-204ENST00000424645 LAMC3Q9Y6N6 1575 aa18.1■□□□□ 0.49
NCSTN-204ENST00000424645 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
NCSTN-204ENST00000424645 CCDC88BA6NC98 1476 aa18.09■□□□□ 0.49
NCSTN-204ENST00000424645 CFTRP13569 1480 aa18.03■□□□□ 0.48
NCSTN-204ENST00000424645 PDS5BQ9NTI5 1447 aa18.01■□□□□ 0.47
NCSTN-204ENST00000424645 NESP48681 1621 aa17.98■□□□□ 0.47
NCSTN-204ENST00000424645 ERCC6Q03468 1493 aa17.92■□□□□ 0.46
NCSTN-204ENST00000424645 FANCD2Q9BXW9 1451 aa17.84■□□□□ 0.45
NCSTN-204ENST00000424645 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
NCSTN-204ENST00000424645 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
NCSTN-204ENST00000424645 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.43
NCSTN-204ENST00000424645 MRC2Q9UBG0 1479 aa17.75■□□□□ 0.43
NCSTN-204ENST00000424645 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
NCSTN-204ENST00000424645 CUX2O14529 1486 aa17.72■□□□□ 0.43
NCSTN-204ENST00000424645 THOC2Q8NI27 1593 aaKnown RBP17.7■□□□□ 0.42
NCSTN-204ENST00000424645 WDR62O43379 1518 aa17.67■□□□□ 0.42
NCSTN-204ENST00000424645 URB2Q14146 1524 aaKnown RBP17.61■□□□□ 0.41
NCSTN-204ENST00000424645 PLPPR3Q6T4P5 718 aa17.59■□□□□ 0.41
NCSTN-204ENST00000424645 DNMBPQ6XZF7 1577 aa17.58■□□□□ 0.41
NCSTN-204ENST00000424645 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
NCSTN-204ENST00000424645 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
NCSTN-204ENST00000424645 CUX1P39880 1505 aa17.48■□□□□ 0.39
NCSTN-204ENST00000424645 IFT140Q96RY7 1462 aa17.47■□□□□ 0.39
NCSTN-204ENST00000424645 POLA1P09884 1462 aaPredicted RBP17.44■□□□□ 0.38
NCSTN-204ENST00000424645 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
NCSTN-204ENST00000424645 BIVM-ERCC5R4GMW8 1640 aa17.42■□□□□ 0.38
NCSTN-204ENST00000424645 SOGA1O94964 1423 aa17.41■□□□□ 0.38
NCSTN-204ENST00000424645 FGD5Q6ZNL6 1462 aa17.41■□□□□ 0.38
NCSTN-204ENST00000424645 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
NCSTN-204ENST00000424645 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
NCSTN-204ENST00000424645 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
NCSTN-204ENST00000424645 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
NCSTN-204ENST00000424645 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
NCSTN-204ENST00000424645 TRIM41Q8WV44 630 aa17.26■□□□□ 0.35
NCSTN-204ENST00000424645 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
NCSTN-204ENST00000424645 TDRD9Q8NDG6 1382 aaKnown RBP17.23■□□□□ 0.35
NCSTN-204ENST00000424645 AQRO60306 1485 aaKnown RBP eCLIP17.22■□□□□ 0.351e-6■■■■□ 19.3
NCSTN-204ENST00000424645 EIF4G3O43432 1585 aaKnown RBP17.21■□□□□ 0.35
NCSTN-204ENST00000424645 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
NCSTN-204ENST00000424645 GRIN2BQ13224 1484 aa17.18■□□□□ 0.34
NCSTN-204ENST00000424645 KIF27Q86VH2 1401 aa17.17■□□□□ 0.34
NCSTN-204ENST00000424645 ABCA5Q8WWZ7 1642 aa17.17■□□□□ 0.34
NCSTN-204ENST00000424645 MAGI1Q96QZ7 1491 aaPredicted RBP17.14■□□□□ 0.33
NCSTN-204ENST00000424645 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
NCSTN-204ENST00000424645 PIAS4Q8N2W9 510 aaPredicted RBP17.11■□□□□ 0.33
NCSTN-204ENST00000424645 MSH5O43196 834 aa17.08■□□□□ 0.32
NCSTN-204ENST00000424645 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
NCSTN-204ENST00000424645 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
NCSTN-204ENST00000424645 SYNJ2O15056 1496 aa17.05■□□□□ 0.32
NCSTN-204ENST00000424645 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
NCSTN-204ENST00000424645 IGF1RP08069 1367 aa17.04■□□□□ 0.32
NCSTN-204ENST00000424645 OSCARQ8IYS5 282 aa17.04■□□□□ 0.32
NCSTN-204ENST00000424645 CHMP7Q8WUX9 453 aaPredicted RBP17.04■□□□□ 0.32
NCSTN-204ENST00000424645 EEA1Q15075 1411 aa17.04■□□□□ 0.32
NCSTN-204ENST00000424645 ADRA2BP18089 450 aa17.01■□□□□ 0.31
NCSTN-204ENST00000424645 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
NCSTN-204ENST00000424645 CUL7Q14999 1698 aa16.98■□□□□ 0.31
NCSTN-204ENST00000424645 FBLN2P98095 1184 aa16.98■□□□□ 0.31
NCSTN-204ENST00000424645 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
NCSTN-204ENST00000424645 CARMIL1Q5VZK9 1371 aa16.95■□□□□ 0.3
NCSTN-204ENST00000424645 GRIN2AQ12879 1464 aa16.94■□□□□ 0.3
NCSTN-204ENST00000424645 RUSC2Q8N2Y8 1516 aa16.93■□□□□ 0.3
NCSTN-204ENST00000424645 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
NCSTN-204ENST00000424645 DNAJC5Q9H3Z4 198 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms