RNA–Protein interactions for RNA: ENST00000424611.5

HERC2P3-203, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

TSL 5

Gene HERC2P3, Length 1,956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-203ENST00000424611 NISCHQ9Y2I1 1504 aa41.03■■■■■ 4.16
HERC2P3-203ENST00000424611 CCDC180Q9P1Z9 1646 aa35.8■■■■□ 3.32
HERC2P3-203ENST00000424611 ABCC9O60706 1549 aa34.4■■■■□ 3.1
HERC2P3-203ENST00000424611 ZCCHC6Q5VYS8 1495 aaKnown RBP34.4■■■■□ 3.1
HERC2P3-203ENST00000424611 DCAF8L2P0C7V8 631 aa34.18■■■■□ 3.06
HERC2P3-203ENST00000424611 DCAF1Q9Y4B6 1507 aa33.77■■■■□ 3
HERC2P3-203ENST00000424611 SHROOM4Q9ULL8 1493 aa33.51■■■□□ 2.95
HERC2P3-203ENST00000424611 MYO15BQ96JP2 1530 aa33.45■■■□□ 2.95
HERC2P3-203ENST00000424611 NACADO15069 1562 aa33.43■■■□□ 2.94
HERC2P3-203ENST00000424611 RB1CC1Q8TDY2 1594 aa33.25■■■□□ 2.91
HERC2P3-203ENST00000424611 SCRIBQ14160 1630 aa33.12■■■□□ 2.89
HERC2P3-203ENST00000424611 UNC13AQ9UPW8 1703 aa32.7■■■□□ 2.83
HERC2P3-203ENST00000424611 PABPN1Q86U42 306 aaKnown RBP eCLIP32.44■■■□□ 2.78
HERC2P3-203ENST00000424611 BICRAQ9NZM4 1560 aa32.39■■■□□ 2.77
HERC2P3-203ENST00000424611 CECR2Q9BXF3 1484 aa32.05■■■□□ 2.72
HERC2P3-203ENST00000424611 SUPT5HO00267 1087 aaKnown RBP32.02■■■□□ 2.72
HERC2P3-203ENST00000424611 MROH2BQ7Z745 1585 aa31.78■■■□□ 2.68
HERC2P3-203ENST00000424611 RSF1Q96T23 1441 aaPredicted RBP31.76■■■□□ 2.67
HERC2P3-203ENST00000424611 BAZ1AQ9NRL2 1556 aaPredicted RBP31.66■■■□□ 2.66
HERC2P3-203ENST00000424611 SMARCA4P51532 1647 aa31.62■■■□□ 2.65
HERC2P3-203ENST00000424611 WIZO95785 1651 aa31.51■■■□□ 2.64
HERC2P3-203ENST00000424611 EIF4G1Q04637 1599 aaKnown RBP31.41■■■□□ 2.62
HERC2P3-203ENST00000424611 ATAD2BQ9ULI0 1458 aa31.18■■■□□ 2.58
HERC2P3-203ENST00000424611 PEG3Q9GZU2 1588 aa31.16■■■□□ 2.58
HERC2P3-203ENST00000424611 SMARCA2P51531 1590 aa31.06■■■□□ 2.56
HERC2P3-203ENST00000424611 TOP2AP11388 1531 aaKnown RBP31.06■■■□□ 2.56
HERC2P3-203ENST00000424611 CC2D2AQ9P2K1 1620 aa31.05■■■□□ 2.56
HERC2P3-203ENST00000424611 BAZ1BQ9UIG0 1483 aaKnown RBP30.98■■■□□ 2.55
HERC2P3-203ENST00000424611 NCAPD3P42695 1498 aa30.9■■■□□ 2.54
HERC2P3-203ENST00000424611 HMGXB3Q12766 1538 aa30.81■■■□□ 2.52
HERC2P3-203ENST00000424611 CCDC88BA6NC98 1476 aa30.81■■■□□ 2.52
HERC2P3-203ENST00000424611 DNAJC5BQ9UF47 199 aa30.73■■■□□ 2.51
HERC2P3-203ENST00000424611 CHIC1Q5VXU3 224 aa30.39■■■□□ 2.46
HERC2P3-203ENST00000424611 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
HERC2P3-203ENST00000424611 CFTRP13569 1480 aa30.17■■■□□ 2.42
HERC2P3-203ENST00000424611 NESP48681 1621 aa30.14■■■□□ 2.42
HERC2P3-203ENST00000424611 CADPSQ9ULU8 1353 aa30.12■■■□□ 2.41
HERC2P3-203ENST00000424611 TRIM41Q8WV44 630 aa30■■■□□ 2.39
HERC2P3-203ENST00000424611 PRDM2Q13029 1718 aa29.91■■■□□ 2.38
HERC2P3-203ENST00000424611 LAMC3Q9Y6N6 1575 aa29.88■■■□□ 2.37
HERC2P3-203ENST00000424611 WRNQ14191 1432 aaPredicted RBP eCLIP29.87■■■□□ 2.37
HERC2P3-203ENST00000424611 SYNJ1O43426 1573 aa29.84■■■□□ 2.37
HERC2P3-203ENST00000424611 FANCD2Q9BXW9 1451 aa29.83■■■□□ 2.37
HERC2P3-203ENST00000424611 CUX1P39880 1505 aa29.71■■■□□ 2.35
HERC2P3-203ENST00000424611 KIF21AQ7Z4S6 1674 aa29.69■■■□□ 2.34
HERC2P3-203ENST00000424611 PDS5BQ9NTI5 1447 aa29.67■■■□□ 2.34
HERC2P3-203ENST00000424611 CEP164Q9UPV0 1460 aa29.64■■■□□ 2.34
HERC2P3-203ENST00000424611 TOP2BQ02880 1626 aa29.64■■■□□ 2.33
HERC2P3-203ENST00000424611 FAM9AQ8IZU1 332 aaPredicted RBP29.62■■■□□ 2.33
HERC2P3-203ENST00000424611 BIVM-ERCC5R4GMW8 1640 aa29.59■■■□□ 2.33
HERC2P3-203ENST00000424611 URB2Q14146 1524 aaKnown RBP29.52■■■□□ 2.32
HERC2P3-203ENST00000424611 SOGA1O94964 1423 aa29.52■■■□□ 2.32
HERC2P3-203ENST00000424611 TOPBP1Q92547 1522 aa29.48■■■□□ 2.31
HERC2P3-203ENST00000424611 RUSC2Q8N2Y8 1516 aa29.46■■■□□ 2.31
HERC2P3-203ENST00000424611 DNMBPQ6XZF7 1577 aa29.45■■■□□ 2.3
HERC2P3-203ENST00000424611 ERCC6Q03468 1493 aa29.44■■■□□ 2.3
HERC2P3-203ENST00000424611 FGD5Q6ZNL6 1462 aa29.43■■■□□ 2.3
HERC2P3-203ENST00000424611 EHMT2Q96KQ7 1210 aa29.35■■■□□ 2.29
HERC2P3-203ENST00000424611 LOC105371045A0A1W2PR82 267 aa29.35■■■□□ 2.29
HERC2P3-203ENST00000424611 MRC2Q9UBG0 1479 aa29.35■■■□□ 2.29
HERC2P3-203ENST00000424611 POLA1P09884 1462 aaPredicted RBP29.34■■■□□ 2.29
HERC2P3-203ENST00000424611 RAD54L2Q9Y4B4 1467 aa29.31■■■□□ 2.28
HERC2P3-203ENST00000424611 THOC2Q8NI27 1593 aaKnown RBP29.24■■■□□ 2.27
HERC2P3-203ENST00000424611 WDR62O43379 1518 aa29.21■■■□□ 2.27
HERC2P3-203ENST00000424611 CUX2O14529 1486 aa29.17■■■□□ 2.26
HERC2P3-203ENST00000424611 CSRNP3Q8WYN3 585 aa29.13■■■□□ 2.25
HERC2P3-203ENST00000424611 EEA1Q15075 1411 aa29.11■■■□□ 2.25
HERC2P3-203ENST00000424611 KIF27Q86VH2 1401 aa29.09■■■□□ 2.25
HERC2P3-203ENST00000424611 ABCA10Q8WWZ4 1543 aa29.09■■■□□ 2.25
HERC2P3-203ENST00000424611 TARBP1Q13395 1621 aaKnown RBP29.06■■■□□ 2.24
HERC2P3-203ENST00000424611 TDRD9Q8NDG6 1382 aaKnown RBP29.05■■■□□ 2.24
HERC2P3-203ENST00000424611 WDR97A6NE52 1622 aa29.04■■■□□ 2.24
HERC2P3-203ENST00000424611 ZNF608Q9ULD9 1512 aaPredicted RBP28.95■■■□□ 2.23
HERC2P3-203ENST00000424611 IGF1RP08069 1367 aa28.93■■■□□ 2.22
HERC2P3-203ENST00000424611 AQRO60306 1485 aaKnown RBP eCLIP28.91■■■□□ 2.221e-7■■■□□ 17.9
HERC2P3-203ENST00000424611 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
HERC2P3-203ENST00000424611 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
HERC2P3-203ENST00000424611 RAPGEF2Q9Y4G8 1499 aa28.9■■■□□ 2.22
HERC2P3-203ENST00000424611 GAPVD1Q14C86 1478 aa28.87■■■□□ 2.21
HERC2P3-203ENST00000424611 PRXQ9BXM0 1461 aa28.85■■■□□ 2.21
HERC2P3-203ENST00000424611 KIF21BO75037 1637 aa28.85■■■□□ 2.21
HERC2P3-203ENST00000424611 GOLGA3Q08378 1498 aa28.81■■■□□ 2.2
HERC2P3-203ENST00000424611 UBTFP17480 764 aaKnown RBP28.79■■■□□ 2.2
HERC2P3-203ENST00000424611 EIF4G3O43432 1585 aaKnown RBP28.77■■■□□ 2.2
HERC2P3-203ENST00000424611 CARMIL1Q5VZK9 1371 aa28.76■■■□□ 2.19
HERC2P3-203ENST00000424611 PBRM1Q86U86 1689 aa28.72■■■□□ 2.19
HERC2P3-203ENST00000424611 ERICH3Q5RHP9 1530 aa28.7■■■□□ 2.19
HERC2P3-203ENST00000424611 GRIN2BQ13224 1484 aa28.65■■■□□ 2.18
HERC2P3-203ENST00000424611 TNIKQ9UKE5 1360 aa28.64■■■□□ 2.18
HERC2P3-203ENST00000424611 CUL7Q14999 1698 aa28.63■■■□□ 2.17
HERC2P3-203ENST00000424611 RANGAP1P46060 587 aaPredicted RBP28.63■■■□□ 2.17
HERC2P3-203ENST00000424611 SNAPC4Q5SXM2 1469 aa28.59■■■□□ 2.17
HERC2P3-203ENST00000424611 CEP162Q5TB80 1403 aa28.57■■■□□ 2.16
HERC2P3-203ENST00000424611 ADAMTS12P58397 1594 aa28.56■■■□□ 2.16
HERC2P3-203ENST00000424611 FHAD1B1AJZ9 1412 aa28.5■■■□□ 2.15
HERC2P3-203ENST00000424611 MAGI1Q96QZ7 1491 aaPredicted RBP28.42■■■□□ 2.14
HERC2P3-203ENST00000424611 FBLN2P98095 1184 aa28.41■■■□□ 2.14
HERC2P3-203ENST00000424611 CLIP1P30622 1438 aa28.4■■■□□ 2.14
HERC2P3-203ENST00000424611 GRIN2AQ12879 1464 aa28.35■■■□□ 2.13
HERC2P3-203ENST00000424611 SYNJ2O15056 1496 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms