RNA–Protein interactions for RNA: ENST00000423559.2

SUFU-203, Transcript of SUFU negative regulator of hedgehog signaling, humanhuman

TSL 1 (best) BASIC

Gene SUFU, Length 2,601 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUFU-203ENST00000423559 NISCHQ9Y2I1 1504 aa20.45■□□□□ 0.87
SUFU-203ENST00000423559 HRCP23327 699 aa17.97■□□□□ 0.47
SUFU-203ENST00000423559 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
SUFU-203ENST00000423559 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
SUFU-203ENST00000423559 PPARGC1BQ86YN6 1023 aaKnown RBP17.56■□□□□ 0.4
SUFU-203ENST00000423559 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
SUFU-203ENST00000423559 MYO15BQ96JP2 1530 aa17.29■□□□□ 0.36
SUFU-203ENST00000423559 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
SUFU-203ENST00000423559 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
SUFU-203ENST00000423559 ZCCHC6Q5VYS8 1495 aaKnown RBP17.16■□□□□ 0.34
SUFU-203ENST00000423559 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
SUFU-203ENST00000423559 CHIC1Q5VXU3 224 aa17.08■□□□□ 0.33
SUFU-203ENST00000423559 ABCC9O60706 1549 aa17.04■□□□□ 0.32
SUFU-203ENST00000423559 MYT1Q01538 1121 aa17.03■□□□□ 0.32
SUFU-203ENST00000423559 DCAF1Q9Y4B6 1507 aa16.98■□□□□ 0.31
SUFU-203ENST00000423559 DCAF8L2P0C7V8 631 aa16.83■□□□□ 0.28
SUFU-203ENST00000423559 TRIM26Q12899 539 aaPredicted RBP16.82■□□□□ 0.28
SUFU-203ENST00000423559 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
SUFU-203ENST00000423559 NACADO15069 1562 aa16.74■□□□□ 0.27
SUFU-203ENST00000423559 LOC105371045A0A1W2PR82 267 aa16.69■□□□□ 0.26
SUFU-203ENST00000423559 ACIN1Q9UKV3 1341 aaKnown RBP16.62■□□□□ 0.25
SUFU-203ENST00000423559 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
SUFU-203ENST00000423559 NEUROD1Q13562 356 aa16.57■□□□□ 0.24
SUFU-203ENST00000423559 GTF3C3Q9Y5Q9 886 aa16.49■□□□□ 0.23
SUFU-203ENST00000423559 SCRIBQ14160 1630 aa16.42■□□□□ 0.22
SUFU-203ENST00000423559 CENPBP07199 599 aaPredicted RBP16.33■□□□□ 0.21
SUFU-203ENST00000423559 UNC13AQ9UPW8 1703 aa16.28■□□□□ 0.2
SUFU-203ENST00000423559 DIEXFQ68CQ4 756 aaKnown RBP16.19■□□□□ 0.18
SUFU-203ENST00000423559 BICRAQ9NZM4 1560 aa16.13■□□□□ 0.17
SUFU-203ENST00000423559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
SUFU-203ENST00000423559 TTBK1Q5TCY1 1321 aaPredicted RBP16.06■□□□□ 0.16
SUFU-203ENST00000423559 CCER1Q8TC90 406 aaPredicted RBP16.03■□□□□ 0.16
SUFU-203ENST00000423559 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
SUFU-203ENST00000423559 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
SUFU-203ENST00000423559 BCL11AQ9H165 835 aa15.95■□□□□ 0.14
SUFU-203ENST00000423559 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
SUFU-203ENST00000423559 FAM9AQ8IZU1 332 aaPredicted RBP15.91■□□□□ 0.14
SUFU-203ENST00000423559 CECR2Q9BXF3 1484 aa15.88■□□□□ 0.13
SUFU-203ENST00000423559 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
SUFU-203ENST00000423559 ZNF316A6NFI3 1004 aaPredicted RBP15.82■□□□□ 0.12
SUFU-203ENST00000423559 BAZ1AQ9NRL2 1556 aaPredicted RBP15.8■□□□□ 0.12
SUFU-203ENST00000423559 ANP32EQ9BTT0 268 aa15.8■□□□□ 0.12
SUFU-203ENST00000423559 RSF1Q96T23 1441 aaPredicted RBP15.79■□□□□ 0.12
SUFU-203ENST00000423559 MROH2BQ7Z745 1585 aa15.78■□□□□ 0.12
SUFU-203ENST00000423559 MIER1Q8N108 512 aa15.77■□□□□ 0.11
SUFU-203ENST00000423559 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
SUFU-203ENST00000423559 TSHZ2Q9NRE2 1034 aa15.66■□□□□ 0.1
SUFU-203ENST00000423559 SUPT16HQ9Y5B9 1047 aaKnown RBP15.65■□□□□ 0.1
SUFU-203ENST00000423559 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.1
SUFU-203ENST00000423559 WIZO95785 1651 aa15.64■□□□□ 0.09
SUFU-203ENST00000423559 EIF4G1Q04637 1599 aaKnown RBP15.64■□□□□ 0.09
SUFU-203ENST00000423559 PRKCSHP14314 528 aaPredicted RBP15.63■□□□□ 0.09
SUFU-203ENST00000423559 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
SUFU-203ENST00000423559 CLSPNQ9HAW4 1339 aa15.6■□□□□ 0.09
SUFU-203ENST00000423559 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
SUFU-203ENST00000423559 SMARCA2P51531 1590 aa15.53■□□□□ 0.08
SUFU-203ENST00000423559 TOP2AP11388 1531 aaKnown RBP15.5■□□□□ 0.07
SUFU-203ENST00000423559 WRNQ14191 1432 aaPredicted RBP eCLIP15.48■□□□□ 0.07
SUFU-203ENST00000423559 CC2D2AQ9P2K1 1620 aa15.45■□□□□ 0.06
SUFU-203ENST00000423559 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
SUFU-203ENST00000423559 BAZ1BQ9UIG0 1483 aaKnown RBP15.42■□□□□ 0.06
SUFU-203ENST00000423559 HMGXB3Q12766 1538 aa15.42■□□□□ 0.06
SUFU-203ENST00000423559 CEP162Q5TB80 1403 aa15.32■□□□□ 0.04
SUFU-203ENST00000423559 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
SUFU-203ENST00000423559 RBM19Q9Y4C8 960 aaKnown RBP15.26■□□□□ 0.03
SUFU-203ENST00000423559 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
SUFU-203ENST00000423559 BCANQ96GW7 911 aa15.24■□□□□ 0.03
SUFU-203ENST00000423559 ERICH6Q7L0X2 663 aa15.22■□□□□ 0.03
SUFU-203ENST00000423559 TNIKQ9UKE5 1360 aa15.19■□□□□ 0.02
SUFU-203ENST00000423559 MSH5O43196 834 aa15.17■□□□□ 0.02
SUFU-203ENST00000423559 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
SUFU-203ENST00000423559 FKBP8Q14318 412 aa15.15■□□□□ 0.02
SUFU-203ENST00000423559 KCNH8Q96L42 1107 aa15.12■□□□□ 0.01
SUFU-203ENST00000423559 ABCC8Q09428 1581 aa15.07■□□□□ 0
SUFU-203ENST00000423559 APLP2Q06481 763 aa15.05■□□□□ 0
SUFU-203ENST00000423559 CFTRP13569 1480 aa15.05■□□□□ -0
SUFU-203ENST00000423559 SOGA1O94964 1423 aa15.04■□□□□ -0
SUFU-203ENST00000423559 UBTFP17480 764 aaKnown RBP15.03■□□□□ -0
SUFU-203ENST00000423559 ITGAEP38570 1179 aa15.02■□□□□ -0
SUFU-203ENST00000423559 DHX57Q6P158 1386 aaKnown RBP15.02□□□□□ -0.01
SUFU-203ENST00000423559 CADPSQ9ULU8 1353 aa15.02□□□□□ -0.01
SUFU-203ENST00000423559 FANCIQ9NVI1 1328 aa15□□□□□ -0.01
SUFU-203ENST00000423559 PRDM2Q13029 1718 aa14.98□□□□□ -0.01
SUFU-203ENST00000423559 NEFLP07196 543 aa14.98□□□□□ -0.01
SUFU-203ENST00000423559 RUSC2Q8N2Y8 1516 aa14.95□□□□□ -0.02
SUFU-203ENST00000423559 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
SUFU-203ENST00000423559 LAMC3Q9Y6N6 1575 aa14.95□□□□□ -0.02
SUFU-203ENST00000423559 EEA1Q15075 1411 aa14.94□□□□□ -0.02
SUFU-203ENST00000423559 DEKP35659 375 aaKnown RBP14.94□□□□□ -0.02
SUFU-203ENST00000423559 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
SUFU-203ENST00000423559 ANO8Q9HCE9 1232 aaPredicted RBP14.93□□□□□ -0.02
SUFU-203ENST00000423559 NESP48681 1621 aa14.92□□□□□ -0.02
SUFU-203ENST00000423559 CLIP1P30622 1438 aa14.88□□□□□ -0.03
SUFU-203ENST00000423559 VPS8Q8N3P4 1428 aa14.87□□□□□ -0.03
SUFU-203ENST00000423559 FANCD2Q9BXW9 1451 aa14.85□□□□□ -0.03
SUFU-203ENST00000423559 TRIM52Q96A61 297 aa14.83□□□□□ -0.04
SUFU-203ENST00000423559 SYNJ1O43426 1573 aa14.82□□□□□ -0.04
SUFU-203ENST00000423559 PDS5BQ9NTI5 1447 aa14.81□□□□□ -0.04
SUFU-203ENST00000423559 CDK11AQ9UQ88 783 aaPredicted RBP14.81□□□□□ -0.04
SUFU-203ENST00000423559 DDX10Q13206 875 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms