RNA–Protein interactions for RNA: ENST00000422838.1

RANGAP1-204, Transcript of Ran GTPase activating protein 1, humanhuman

TSL 3

Gene RANGAP1, Length 946 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANGAP1-204ENST00000422838 NISCHQ9Y2I1 1504 aa45.93■■■■■ 4.94
RANGAP1-204ENST00000422838 ABCC9O60706 1549 aa42.39■■■■■ 4.38
RANGAP1-204ENST00000422838 CCDC180Q9P1Z9 1646 aa41.54■■■■■ 4.24
RANGAP1-204ENST00000422838 DNAJC5BQ9UF47 199 aa40.55■■■■■ 4.08
RANGAP1-204ENST00000422838 RB1CC1Q8TDY2 1594 aa39.98■■■■□ 3.99
RANGAP1-204ENST00000422838 NACADO15069 1562 aa39.51■■■■□ 3.92
RANGAP1-204ENST00000422838 PABPN1Q86U42 306 aaKnown RBP eCLIP39.38■■■■□ 3.89
RANGAP1-204ENST00000422838 DCAF8L2P0C7V8 631 aa39.24■■■■□ 3.87
RANGAP1-204ENST00000422838 UNC13AQ9UPW8 1703 aa39.02■■■■□ 3.84
RANGAP1-204ENST00000422838 BICRAQ9NZM4 1560 aa38.82■■■■□ 3.8
RANGAP1-204ENST00000422838 MYO15BQ96JP2 1530 aa38.7■■■■□ 3.79
RANGAP1-204ENST00000422838 CECR2Q9BXF3 1484 aa38.28■■■■□ 3.72
RANGAP1-204ENST00000422838 SHROOM4Q9ULL8 1493 aa38.24■■■■□ 3.71
RANGAP1-204ENST00000422838 CC2D2AQ9P2K1 1620 aa38.23■■■■□ 3.71
RANGAP1-204ENST00000422838 EIF4G1Q04637 1599 aaKnown RBP37.94■■■■□ 3.66
RANGAP1-204ENST00000422838 DCAF1Q9Y4B6 1507 aa37.89■■■■□ 3.66
RANGAP1-204ENST00000422838 DNAJC5Q9H3Z4 198 aa37.89■■■■□ 3.66
RANGAP1-204ENST00000422838 ZCCHC6Q5VYS8 1495 aaKnown RBP37.85■■■■□ 3.65
RANGAP1-204ENST00000422838 SCRIBQ14160 1630 aa37.79■■■■□ 3.64
RANGAP1-204ENST00000422838 CUX2O14529 1486 aa36.89■■■■□ 3.5
RANGAP1-204ENST00000422838 ERCC6Q03468 1493 aa36.68■■■■□ 3.46
RANGAP1-204ENST00000422838 NCAPD3P42695 1498 aa36.52■■■■□ 3.44
RANGAP1-204ENST00000422838 ATAD2BQ9ULI0 1458 aa36.26■■■■□ 3.4
RANGAP1-204ENST00000422838 NESP48681 1621 aa36.16■■■■□ 3.38
RANGAP1-204ENST00000422838 SMARCA2P51531 1590 aa36.12■■■■□ 3.37
RANGAP1-204ENST00000422838 HMGXB3Q12766 1538 aa36.12■■■■□ 3.37
RANGAP1-204ENST00000422838 SMARCA4P51532 1647 aa35.97■■■■□ 3.35
RANGAP1-204ENST00000422838 THOC2Q8NI27 1593 aaKnown RBP35.92■■■■□ 3.34
RANGAP1-204ENST00000422838 BAZ1BQ9UIG0 1483 aaKnown RBP35.86■■■■□ 3.33
RANGAP1-204ENST00000422838 TRIM41Q8WV44 630 aa35.86■■■■□ 3.33
RANGAP1-204ENST00000422838 LAMC3Q9Y6N6 1575 aa35.79■■■■□ 3.32
RANGAP1-204ENST00000422838 BAZ1AQ9NRL2 1556 aaPredicted RBP35.71■■■■□ 3.31
RANGAP1-204ENST00000422838 PDS5BQ9NTI5 1447 aa35.66■■■■□ 3.3
RANGAP1-204ENST00000422838 PEG3Q9GZU2 1588 aa35.64■■■■□ 3.3
RANGAP1-204ENST00000422838 KIF21AQ7Z4S6 1674 aa35.63■■■■□ 3.29
RANGAP1-204ENST00000422838 CADPSQ9ULU8 1353 aa35.38■■■■□ 3.25
RANGAP1-204ENST00000422838 MROH2BQ7Z745 1585 aa35.37■■■■□ 3.25
RANGAP1-204ENST00000422838 MRC2Q9UBG0 1479 aa35.35■■■■□ 3.25
RANGAP1-204ENST00000422838 WDR62O43379 1518 aa35.27■■■■□ 3.24
RANGAP1-204ENST00000422838 OSCARQ8IYS5 282 aa35.16■■■■□ 3.22
RANGAP1-204ENST00000422838 CEP164Q9UPV0 1460 aa35.05■■■■□ 3.2
RANGAP1-204ENST00000422838 FANCD2Q9BXW9 1451 aa34.95■■■■□ 3.19
RANGAP1-204ENST00000422838 WIZO95785 1651 aa34.89■■■■□ 3.18
RANGAP1-204ENST00000422838 CFTRP13569 1480 aa34.78■■■■□ 3.16
RANGAP1-204ENST00000422838 URB2Q14146 1524 aaKnown RBP34.69■■■■□ 3.14
RANGAP1-204ENST00000422838 RIMBP3CA6NJZ7 1639 aa34.66■■■■□ 3.14
RANGAP1-204ENST00000422838 RIMBP3BA6NNM3 1639 aa34.66■■■■□ 3.14
RANGAP1-204ENST00000422838 RIMBP3Q9UFD9 1639 aa34.66■■■■□ 3.14
RANGAP1-204ENST00000422838 ARHGEF11O15085 1522 aa34.49■■■■□ 3.11
RANGAP1-204ENST00000422838 ZNF608Q9ULD9 1512 aaPredicted RBP34.4■■■■□ 3.1
RANGAP1-204ENST00000422838 IFT140Q96RY7 1462 aa34.39■■■■□ 3.1
RANGAP1-204ENST00000422838 TOP2AP11388 1531 aaKnown RBP34.39■■■■□ 3.1
RANGAP1-204ENST00000422838 CYB5RLQ6IPT4 315 aa34.38■■■■□ 3.09
RANGAP1-204ENST00000422838 RSF1Q96T23 1441 aaPredicted RBP34.36■■■■□ 3.09
RANGAP1-204ENST00000422838 PRDM2Q13029 1718 aa34.29■■■■□ 3.08
RANGAP1-204ENST00000422838 TRHP20396 242 aaPredicted RBP34.28■■■■□ 3.08
RANGAP1-204ENST00000422838 TOPBP1Q92547 1522 aa34.18■■■■□ 3.06
RANGAP1-204ENST00000422838 EIF4G3O43432 1585 aaKnown RBP34.13■■■■□ 3.05
RANGAP1-204ENST00000422838 ABCC8Q09428 1581 aa34.1■■■■□ 3.05
RANGAP1-204ENST00000422838 ARAP1Q96P48 1450 aa34.08■■■■□ 3.05
RANGAP1-204ENST00000422838 CCDC88BA6NC98 1476 aa34.05■■■■□ 3.04
RANGAP1-204ENST00000422838 CHD1O14646 1710 aa34.04■■■■□ 3.04
RANGAP1-204ENST00000422838 FBLN2P98095 1184 aa34.02■■■■□ 3.04
RANGAP1-204ENST00000422838 AQRO60306 1485 aaKnown RBP eCLIP34.01■■■■□ 3.04
RANGAP1-204ENST00000422838 DNMBPQ6XZF7 1577 aa33.97■■■■□ 3.03
RANGAP1-204ENST00000422838 TARBP1Q13395 1621 aaKnown RBP33.92■■■■□ 3.02
RANGAP1-204ENST00000422838 AEBP2Q6ZN18 517 aaPredicted RBP33.91■■■■□ 3.02
RANGAP1-204ENST00000422838 POLA1P09884 1462 aaPredicted RBP33.78■■■■□ 3
RANGAP1-204ENST00000422838 TDRD9Q8NDG6 1382 aaKnown RBP33.7■■■□□ 2.98
RANGAP1-204ENST00000422838 RAD54L2Q9Y4B4 1467 aa33.68■■■□□ 2.98
RANGAP1-204ENST00000422838 SOGA1O94964 1423 aa33.66■■■□□ 2.98
RANGAP1-204ENST00000422838 CHMP7Q8WUX9 453 aaPredicted RBP33.64■■■□□ 2.98
RANGAP1-204ENST00000422838 CLASP1Q7Z460 1538 aa33.63■■■□□ 2.97
RANGAP1-204ENST00000422838 SNAPC4Q5SXM2 1469 aa33.61■■■□□ 2.97
RANGAP1-204ENST00000422838 SYNJ1O43426 1573 aa33.58■■■□□ 2.97
RANGAP1-204ENST00000422838 WDR97A6NE52 1622 aa33.53■■■□□ 2.96
RANGAP1-204ENST00000422838 MAGI1Q96QZ7 1491 aaPredicted RBP33.51■■■□□ 2.96
RANGAP1-204ENST00000422838 FGD5Q6ZNL6 1462 aa33.44■■■□□ 2.94
RANGAP1-204ENST00000422838 GRIN2BQ13224 1484 aa33.44■■■□□ 2.94
RANGAP1-204ENST00000422838 SYNJ2O15056 1496 aa33.42■■■□□ 2.94
RANGAP1-204ENST00000422838 GAPVD1Q14C86 1478 aa33.39■■■□□ 2.94
RANGAP1-204ENST00000422838 CUX1P39880 1505 aa33.27■■■□□ 2.92
RANGAP1-204ENST00000422838 PBRM1Q86U86 1689 aa33.17■■■□□ 2.9
RANGAP1-204ENST00000422838 ERCC6L2Q5T890 1561 aa33.05■■■□□ 2.88
RANGAP1-204ENST00000422838 ABCA10Q8WWZ4 1543 aa33.03■■■□□ 2.88
RANGAP1-204ENST00000422838 ABCA5Q8WWZ7 1642 aa33.01■■■□□ 2.87
RANGAP1-204ENST00000422838 GRIN2AQ12879 1464 aa32.99■■■□□ 2.87
RANGAP1-204ENST00000422838 CEP170Q5SW79 1584 aa32.96■■■□□ 2.87
RANGAP1-204ENST00000422838 NUP160Q12769 1436 aa32.91■■■□□ 2.86
RANGAP1-204ENST00000422838 KIF13AQ9H1H9 1805 aa32.86■■■□□ 2.85
RANGAP1-204ENST00000422838 SHROOM2Q13796 1616 aa32.83■■■□□ 2.85
RANGAP1-204ENST00000422838 ADAMTS12P58397 1594 aa32.81■■■□□ 2.84
RANGAP1-204ENST00000422838 WRNQ14191 1432 aaPredicted RBP eCLIP32.77■■■□□ 2.84
RANGAP1-204ENST00000422838 FHAD1B1AJZ9 1412 aa32.77■■■□□ 2.84
RANGAP1-204ENST00000422838 FAM69CQ0P6D2 419 aa32.7■■■□□ 2.83
RANGAP1-204ENST00000422838 PRG4Q92954 1404 aaPredicted RBP32.69■■■□□ 2.82
RANGAP1-204ENST00000422838 JPH4Q96JJ6 628 aa32.66■■■□□ 2.82
RANGAP1-204ENST00000422838 NPM1P06748 294 aaKnown RBP eCLIP32.64■■■□□ 2.82
RANGAP1-204ENST00000422838 ABCC10Q5T3U5 1492 aa32.63■■■□□ 2.81
RANGAP1-204ENST00000422838 ERICH3Q5RHP9 1530 aa32.6■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms