RNA–Protein interactions for RNA: ENST00000422830.1

AC004554.1-201, humanhuman

BASIC

Gene AC004554.1, Length 1,468 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004554.1-201ENST00000422830 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.88
AC004554.1-201ENST00000422830 ABCC9O60706 1549 aa30.3■■■□□ 2.44
AC004554.1-201ENST00000422830 CCDC180Q9P1Z9 1646 aa29.83■■■□□ 2.37
AC004554.1-201ENST00000422830 DNAJC5BQ9UF47 199 aa28.85■■■□□ 2.21
AC004554.1-201ENST00000422830 RB1CC1Q8TDY2 1594 aa28.65■■■□□ 2.18
AC004554.1-201ENST00000422830 NACADO15069 1562 aa28.35■■■□□ 2.13
AC004554.1-201ENST00000422830 PABPN1Q86U42 306 aaKnown RBP eCLIP28.16■■■□□ 2.1
AC004554.1-201ENST00000422830 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.09
AC004554.1-201ENST00000422830 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.06
AC004554.1-201ENST00000422830 MYO15BQ96JP2 1530 aa27.84■■■□□ 2.05
AC004554.1-201ENST00000422830 BICRAQ9NZM4 1560 aa27.81■■■□□ 2.04
AC004554.1-201ENST00000422830 ZCCHC6Q5VYS8 1495 aaKnown RBP27.47■■□□□ 1.99
AC004554.1-201ENST00000422830 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
AC004554.1-201ENST00000422830 CECR2Q9BXF3 1484 aa27.36■■□□□ 1.97
AC004554.1-201ENST00000422830 CC2D2AQ9P2K1 1620 aa27.33■■□□□ 1.96
AC004554.1-201ENST00000422830 DCAF1Q9Y4B6 1507 aa27.3■■□□□ 1.96
AC004554.1-201ENST00000422830 EIF4G1Q04637 1599 aaKnown RBP27.17■■□□□ 1.94
AC004554.1-201ENST00000422830 SCRIBQ14160 1630 aa27.15■■□□□ 1.94
AC004554.1-201ENST00000422830 DNAJC5Q9H3Z4 198 aa26.86■■□□□ 1.89
AC004554.1-201ENST00000422830 CUX2O14529 1486 aa26.32■■□□□ 1.8
AC004554.1-201ENST00000422830 ERCC6Q03468 1493 aa26.21■■□□□ 1.79
AC004554.1-201ENST00000422830 NCAPD3P42695 1498 aa26.2■■□□□ 1.79
AC004554.1-201ENST00000422830 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
AC004554.1-201ENST00000422830 SMARCA2P51531 1590 aa25.94■■□□□ 1.74
AC004554.1-201ENST00000422830 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
AC004554.1-201ENST00000422830 NESP48681 1621 aa25.89■■□□□ 1.73
AC004554.1-201ENST00000422830 SMARCA4P51532 1647 aa25.86■■□□□ 1.73
AC004554.1-201ENST00000422830 BAZ1BQ9UIG0 1483 aaKnown RBP25.76■■□□□ 1.71
AC004554.1-201ENST00000422830 THOC2Q8NI27 1593 aaKnown RBP25.7■■□□□ 1.71
AC004554.1-201ENST00000422830 BAZ1AQ9NRL2 1556 aaPredicted RBP25.7■■□□□ 1.71
AC004554.1-201ENST00000422830 LAMC3Q9Y6N6 1575 aa25.65■■□□□ 1.7
AC004554.1-201ENST00000422830 PEG3Q9GZU2 1588 aa25.64■■□□□ 1.69
AC004554.1-201ENST00000422830 PDS5BQ9NTI5 1447 aa25.56■■□□□ 1.68
AC004554.1-201ENST00000422830 KIF21AQ7Z4S6 1674 aa25.49■■□□□ 1.67
AC004554.1-201ENST00000422830 MROH2BQ7Z745 1585 aa25.46■■□□□ 1.67
AC004554.1-201ENST00000422830 TRIM41Q8WV44 630 aa25.46■■□□□ 1.67
AC004554.1-201ENST00000422830 CADPSQ9ULU8 1353 aa25.39■■□□□ 1.66
AC004554.1-201ENST00000422830 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
AC004554.1-201ENST00000422830 WDR62O43379 1518 aa25.28■■□□□ 1.64
AC004554.1-201ENST00000422830 RSF1Q96T23 1441 aaPredicted RBP25.21■■□□□ 1.63
AC004554.1-201ENST00000422830 CEP164Q9UPV0 1460 aa25.14■■□□□ 1.62
AC004554.1-201ENST00000422830 WIZO95785 1651 aa25.1■■□□□ 1.61
AC004554.1-201ENST00000422830 OSCARQ8IYS5 282 aa25.09■■□□□ 1.61
AC004554.1-201ENST00000422830 FANCD2Q9BXW9 1451 aa25.08■■□□□ 1.61
AC004554.1-201ENST00000422830 SUPT5HO00267 1087 aaKnown RBP25.05■■□□□ 1.6
AC004554.1-201ENST00000422830 CFTRP13569 1480 aa24.99■■□□□ 1.59
AC004554.1-201ENST00000422830 URB2Q14146 1524 aaKnown RBP24.89■■□□□ 1.57
AC004554.1-201ENST00000422830 TOP2AP11388 1531 aaKnown RBP24.85■■□□□ 1.57
AC004554.1-201ENST00000422830 RIMBP3CA6NJZ7 1639 aa24.72■■□□□ 1.55
AC004554.1-201ENST00000422830 RIMBP3BA6NNM3 1639 aa24.72■■□□□ 1.55
AC004554.1-201ENST00000422830 RIMBP3Q9UFD9 1639 aa24.72■■□□□ 1.55
AC004554.1-201ENST00000422830 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
AC004554.1-201ENST00000422830 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
AC004554.1-201ENST00000422830 ARHGEF11O15085 1522 aa24.63■■□□□ 1.53
AC004554.1-201ENST00000422830 PRDM2Q13029 1718 aa24.59■■□□□ 1.53
AC004554.1-201ENST00000422830 TOPBP1Q92547 1522 aa24.54■■□□□ 1.52
AC004554.1-201ENST00000422830 CCDC88BA6NC98 1476 aa24.53■■□□□ 1.52
AC004554.1-201ENST00000422830 CYB5RLQ6IPT4 315 aa24.51■■□□□ 1.51
AC004554.1-201ENST00000422830 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
AC004554.1-201ENST00000422830 EIF4G3O43432 1585 aaKnown RBP24.46■■□□□ 1.51
AC004554.1-201ENST00000422830 DNMBPQ6XZF7 1577 aa24.41■■□□□ 1.5
AC004554.1-201ENST00000422830 AQRO60306 1485 aaKnown RBP eCLIP24.39■■□□□ 1.49
AC004554.1-201ENST00000422830 TRHP20396 242 aaPredicted RBP24.38■■□□□ 1.49
AC004554.1-201ENST00000422830 ARAP1Q96P48 1450 aa24.36■■□□□ 1.49
AC004554.1-201ENST00000422830 FBLN2P98095 1184 aa24.34■■□□□ 1.49
AC004554.1-201ENST00000422830 TARBP1Q13395 1621 aaKnown RBP24.34■■□□□ 1.49
AC004554.1-201ENST00000422830 CHD1O14646 1710 aa24.34■■□□□ 1.49
AC004554.1-201ENST00000422830 POLA1P09884 1462 aaPredicted RBP24.26■■□□□ 1.47
AC004554.1-201ENST00000422830 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
AC004554.1-201ENST00000422830 TDRD9Q8NDG6 1382 aaKnown RBP24.18■■□□□ 1.46
AC004554.1-201ENST00000422830 SOGA1O94964 1423 aa24.18■■□□□ 1.46
AC004554.1-201ENST00000422830 SNAPC4Q5SXM2 1469 aa24.11■■□□□ 1.45
AC004554.1-201ENST00000422830 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
AC004554.1-201ENST00000422830 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
AC004554.1-201ENST00000422830 WDR97A6NE52 1622 aa24.08■■□□□ 1.45
AC004554.1-201ENST00000422830 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
AC004554.1-201ENST00000422830 MAGI1Q96QZ7 1491 aaPredicted RBP24.05■■□□□ 1.44
AC004554.1-201ENST00000422830 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
AC004554.1-201ENST00000422830 AEBP2Q6ZN18 517 aaPredicted RBP24.01■■□□□ 1.43
AC004554.1-201ENST00000422830 GRIN2BQ13224 1484 aa24.01■■□□□ 1.43
AC004554.1-201ENST00000422830 SYNJ2O15056 1496 aa23.98■■□□□ 1.43
AC004554.1-201ENST00000422830 CUX1P39880 1505 aa23.94■■□□□ 1.42
AC004554.1-201ENST00000422830 GAPVD1Q14C86 1478 aa23.9■■□□□ 1.42
AC004554.1-201ENST00000422830 WRNQ14191 1432 aaPredicted RBP eCLIP23.81■■□□□ 1.4
AC004554.1-201ENST00000422830 PBRM1Q86U86 1689 aa23.8■■□□□ 1.4
AC004554.1-201ENST00000422830 ABCA10Q8WWZ4 1543 aa23.77■■□□□ 1.4
AC004554.1-201ENST00000422830 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
AC004554.1-201ENST00000422830 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
AC004554.1-201ENST00000422830 GRIN2AQ12879 1464 aa23.69■■□□□ 1.38
AC004554.1-201ENST00000422830 TOP2BQ02880 1626 aa23.68■■□□□ 1.38
AC004554.1-201ENST00000422830 ERCC6L2Q5T890 1561 aa23.68■■□□□ 1.38
AC004554.1-201ENST00000422830 BIVM-ERCC5R4GMW8 1640 aa23.67■■□□□ 1.38
AC004554.1-201ENST00000422830 NUP160Q12769 1436 aa23.64■■□□□ 1.37
AC004554.1-201ENST00000422830 CEP170Q5SW79 1584 aa23.62■■□□□ 1.37
AC004554.1-201ENST00000422830 ADAMTS12P58397 1594 aa23.59■■□□□ 1.37
AC004554.1-201ENST00000422830 FHAD1B1AJZ9 1412 aa23.56■■□□□ 1.36
AC004554.1-201ENST00000422830 SHROOM2Q13796 1616 aa23.54■■□□□ 1.36
AC004554.1-201ENST00000422830 ERICH3Q5RHP9 1530 aa23.45■■□□□ 1.34
AC004554.1-201ENST00000422830 PRG4Q92954 1404 aaPredicted RBP23.45■■□□□ 1.34
AC004554.1-201ENST00000422830 KIF13AQ9H1H9 1805 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms