RNA–Protein interactions for RNA: ENST00000422600.1

AC159540.1-201, humanhuman

TSL 4 BASIC

Gene AC159540.1, Length 555 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC159540.1-201ENST00000422600 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
AC159540.1-201ENST00000422600 AEBP2Q6ZN18 517 aaPredicted RBP29.44■■■□□ 2.3
AC159540.1-201ENST00000422600 CHIC1Q5VXU3 224 aa28.26■■■□□ 2.11
AC159540.1-201ENST00000422600 ABCC9O60706 1549 aa27.43■■□□□ 1.98
AC159540.1-201ENST00000422600 CCDC180Q9P1Z9 1646 aa27.23■■□□□ 1.95
AC159540.1-201ENST00000422600 RB1CC1Q8TDY2 1594 aa26.02■■□□□ 1.76
AC159540.1-201ENST00000422600 DCAF8L2P0C7V8 631 aa25.86■■□□□ 1.73
AC159540.1-201ENST00000422600 NACADO15069 1562 aa25.78■■□□□ 1.72
AC159540.1-201ENST00000422600 DNAJC5BQ9UF47 199 aa25.77■■□□□ 1.72
AC159540.1-201ENST00000422600 PABPN1Q86U42 306 aaKnown RBP eCLIP25.56■■□□□ 1.68
AC159540.1-201ENST00000422600 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
AC159540.1-201ENST00000422600 MYO15BQ96JP2 1530 aa25.32■■□□□ 1.64
AC159540.1-201ENST00000422600 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
AC159540.1-201ENST00000422600 SENP3Q9H4L4 574 aaPredicted RBP25.14■■□□□ 1.62
AC159540.1-201ENST00000422600 ZCCHC6Q5VYS8 1495 aaKnown RBP25.09■■□□□ 1.61
AC159540.1-201ENST00000422600 DCAF1Q9Y4B6 1507 aa24.97■■□□□ 1.59
AC159540.1-201ENST00000422600 SCRIBQ14160 1630 aa24.9■■□□□ 1.58
AC159540.1-201ENST00000422600 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
AC159540.1-201ENST00000422600 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.56
AC159540.1-201ENST00000422600 CC2D2AQ9P2K1 1620 aa24.74■■□□□ 1.55
AC159540.1-201ENST00000422600 CECR2Q9BXF3 1484 aa24.69■■□□□ 1.54
AC159540.1-201ENST00000422600 EIF4G1Q04637 1599 aaKnown RBP24.64■■□□□ 1.54
AC159540.1-201ENST00000422600 NCAPD3P42695 1498 aa23.78■■□□□ 1.4
AC159540.1-201ENST00000422600 DNAJC5Q9H3Z4 198 aa23.73■■□□□ 1.39
AC159540.1-201ENST00000422600 ATAD2BQ9ULI0 1458 aa23.73■■□□□ 1.39
AC159540.1-201ENST00000422600 ERCC6Q03468 1493 aa23.72■■□□□ 1.39
AC159540.1-201ENST00000422600 SMARCA4P51532 1647 aa23.7■■□□□ 1.38
AC159540.1-201ENST00000422600 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
AC159540.1-201ENST00000422600 CUX2O14529 1486 aa23.62■■□□□ 1.37
AC159540.1-201ENST00000422600 HMGXB3Q12766 1538 aa23.61■■□□□ 1.37
AC159540.1-201ENST00000422600 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
AC159540.1-201ENST00000422600 BAZ1BQ9UIG0 1483 aaKnown RBP23.55■■□□□ 1.36
AC159540.1-201ENST00000422600 NESP48681 1621 aa23.51■■□□□ 1.35
AC159540.1-201ENST00000422600 MROH2BQ7Z745 1585 aa23.39■■□□□ 1.33
AC159540.1-201ENST00000422600 PEG3Q9GZU2 1588 aa23.39■■□□□ 1.33
AC159540.1-201ENST00000422600 FOXD1Q16676 465 aa23.36■■□□□ 1.33
AC159540.1-201ENST00000422600 LAMC3Q9Y6N6 1575 aa23.3■■□□□ 1.32
AC159540.1-201ENST00000422600 THOC2Q8NI27 1593 aaKnown RBP23.24■■□□□ 1.31
AC159540.1-201ENST00000422600 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
AC159540.1-201ENST00000422600 PDS5BQ9NTI5 1447 aa23.2■■□□□ 1.3
AC159540.1-201ENST00000422600 WIZO95785 1651 aa23.13■■□□□ 1.29
AC159540.1-201ENST00000422600 CADPSQ9ULU8 1353 aa23.1■■□□□ 1.29
AC159540.1-201ENST00000422600 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
AC159540.1-201ENST00000422600 WDR62O43379 1518 aa22.9■■□□□ 1.26
AC159540.1-201ENST00000422600 CEP164Q9UPV0 1460 aa22.9■■□□□ 1.26
AC159540.1-201ENST00000422600 FANCD2Q9BXW9 1451 aa22.86■■□□□ 1.25
AC159540.1-201ENST00000422600 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
AC159540.1-201ENST00000422600 TOP2AP11388 1531 aaKnown RBP22.79■■□□□ 1.24
AC159540.1-201ENST00000422600 TRIM41Q8WV44 630 aa22.79■■□□□ 1.24
AC159540.1-201ENST00000422600 CFTRP13569 1480 aa22.79■■□□□ 1.24
AC159540.1-201ENST00000422600 PLPPR3Q6T4P5 718 aa22.75■■□□□ 1.23
AC159540.1-201ENST00000422600 URB2Q14146 1524 aaKnown RBP22.66■■□□□ 1.22
AC159540.1-201ENST00000422600 OSCARQ8IYS5 282 aa22.6■■□□□ 1.21
AC159540.1-201ENST00000422600 PRDM2Q13029 1718 aa22.59■■□□□ 1.21
AC159540.1-201ENST00000422600 CCDC88BA6NC98 1476 aa22.55■■□□□ 1.2
AC159540.1-201ENST00000422600 IFT140Q96RY7 1462 aa22.42■■□□□ 1.18
AC159540.1-201ENST00000422600 ZNF608Q9ULD9 1512 aaPredicted RBP22.41■■□□□ 1.18
AC159540.1-201ENST00000422600 TOPBP1Q92547 1522 aa22.4■■□□□ 1.18
AC159540.1-201ENST00000422600 ABCC8Q09428 1581 aa22.33■■□□□ 1.17
AC159540.1-201ENST00000422600 DNMBPQ6XZF7 1577 aa22.31■■□□□ 1.16
AC159540.1-201ENST00000422600 RIMBP3CA6NJZ7 1639 aa22.28■■□□□ 1.16
AC159540.1-201ENST00000422600 RIMBP3BA6NNM3 1639 aa22.28■■□□□ 1.16
AC159540.1-201ENST00000422600 RIMBP3Q9UFD9 1639 aa22.28■■□□□ 1.16
AC159540.1-201ENST00000422600 EIF4G3O43432 1585 aaKnown RBP22.28■■□□□ 1.16
AC159540.1-201ENST00000422600 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.15
AC159540.1-201ENST00000422600 FBLN2P98095 1184 aa22.21■■□□□ 1.15
AC159540.1-201ENST00000422600 ARHGEF11O15085 1522 aa22.19■■□□□ 1.14
AC159540.1-201ENST00000422600 TARBP1Q13395 1621 aaKnown RBP22.19■■□□□ 1.14
AC159540.1-201ENST00000422600 CHD1O14646 1710 aa22.17■■□□□ 1.14
AC159540.1-201ENST00000422600 POLA1P09884 1462 aaPredicted RBP22.16■■□□□ 1.14
AC159540.1-201ENST00000422600 RAD54L2Q9Y4B4 1467 aa22.12■■□□□ 1.13
AC159540.1-201ENST00000422600 CYB5RLQ6IPT4 315 aa22.11■■□□□ 1.13
AC159540.1-201ENST00000422600 SOGA1O94964 1423 aa22.1■■□□□ 1.13
AC159540.1-201ENST00000422600 TDRD9Q8NDG6 1382 aaKnown RBP22.08■■□□□ 1.12
AC159540.1-201ENST00000422600 PPP6R1Q9UPN7 881 aa22.04■■□□□ 1.12
AC159540.1-201ENST00000422600 ADRA2BP18089 450 aa22.03■■□□□ 1.12
AC159540.1-201ENST00000422600 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
AC159540.1-201ENST00000422600 SNAPC4Q5SXM2 1469 aa21.98■■□□□ 1.11
AC159540.1-201ENST00000422600 CUX1P39880 1505 aa21.97■■□□□ 1.11
AC159540.1-201ENST00000422600 CHMP7Q8WUX9 453 aaPredicted RBP21.97■■□□□ 1.11
AC159540.1-201ENST00000422600 TRHP20396 242 aaPredicted RBP21.96■■□□□ 1.11
AC159540.1-201ENST00000422600 PIAS4Q8N2W9 510 aaPredicted RBP21.96■■□□□ 1.11
AC159540.1-201ENST00000422600 ARAP1Q96P48 1450 aa21.95■■□□□ 1.1
AC159540.1-201ENST00000422600 SUPT5HO00267 1087 aaKnown RBP21.94■■□□□ 1.1
AC159540.1-201ENST00000422600 WDR97A6NE52 1622 aa21.92■■□□□ 1.1
AC159540.1-201ENST00000422600 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
AC159540.1-201ENST00000422600 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
AC159540.1-201ENST00000422600 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
AC159540.1-201ENST00000422600 CLASP1Q7Z460 1538 aa21.83■■□□□ 1.09
AC159540.1-201ENST00000422600 SYNJ2O15056 1496 aa21.83■■□□□ 1.08
AC159540.1-201ENST00000422600 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
AC159540.1-201ENST00000422600 GAPVD1Q14C86 1478 aa21.82■■□□□ 1.08
AC159540.1-201ENST00000422600 MSH5O43196 834 aa21.8■■□□□ 1.08
AC159540.1-201ENST00000422600 ABCA10Q8WWZ4 1543 aa21.74■■□□□ 1.07
AC159540.1-201ENST00000422600 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
AC159540.1-201ENST00000422600 WRNQ14191 1432 aaPredicted RBP eCLIP21.68■■□□□ 1.06
AC159540.1-201ENST00000422600 GRIN2AQ12879 1464 aa21.6■■□□□ 1.05
AC159540.1-201ENST00000422600 TOP2BQ02880 1626 aa21.59■■□□□ 1.05
AC159540.1-201ENST00000422600 BIVM-ERCC5R4GMW8 1640 aa21.59■■□□□ 1.05
AC159540.1-201ENST00000422600 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms