RNA–Protein interactions for RNA: ENST00000422486.1

RPL4P4-201, Transcript of ribosomal protein L4 pseudogene 4, humanhuman

BASIC

Gene RPL4P4, Length 1,284 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4P4-201ENST00000422486 AEBP2Q6ZN18 517 aaPredicted RBP21.75■■□□□ 1.07
RPL4P4-201ENST00000422486 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
RPL4P4-201ENST00000422486 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
RPL4P4-201ENST00000422486 ABCC9O60706 1549 aa19.46■□□□□ 0.71
RPL4P4-201ENST00000422486 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
RPL4P4-201ENST00000422486 SENP3Q9H4L4 574 aaPredicted RBP18.77■□□□□ 0.6
RPL4P4-201ENST00000422486 CCDC180Q9P1Z9 1646 aa18.52■□□□□ 0.55
RPL4P4-201ENST00000422486 PHF23Q9BUL5 403 aaPredicted RBP18.39■□□□□ 0.53
RPL4P4-201ENST00000422486 DNAJC5Q9H3Z4 198 aa18.31■□□□□ 0.52
RPL4P4-201ENST00000422486 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.48
RPL4P4-201ENST00000422486 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
RPL4P4-201ENST00000422486 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
RPL4P4-201ENST00000422486 NACADO15069 1562 aa17.72■□□□□ 0.43
RPL4P4-201ENST00000422486 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
RPL4P4-201ENST00000422486 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
RPL4P4-201ENST00000422486 CC2D2AQ9P2K1 1620 aa17.55■□□□□ 0.4
RPL4P4-201ENST00000422486 DCAF8L2P0C7V8 631 aa17.4■□□□□ 0.38
RPL4P4-201ENST00000422486 FOXD1Q16676 465 aa17.36■□□□□ 0.37
RPL4P4-201ENST00000422486 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.35
RPL4P4-201ENST00000422486 SHROOM4Q9ULL8 1493 aa17.23■□□□□ 0.35
RPL4P4-201ENST00000422486 CUX2O14529 1486 aa17.16■□□□□ 0.34
RPL4P4-201ENST00000422486 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
RPL4P4-201ENST00000422486 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
RPL4P4-201ENST00000422486 ERCC6Q03468 1493 aa16.83■□□□□ 0.28
RPL4P4-201ENST00000422486 SCRIBQ14160 1630 aa16.81■□□□□ 0.28
RPL4P4-201ENST00000422486 DCAF1Q9Y4B6 1507 aa16.58■□□□□ 0.24
RPL4P4-201ENST00000422486 ZCCHC6Q5VYS8 1495 aaKnown RBP16.51■□□□□ 0.23
RPL4P4-201ENST00000422486 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
RPL4P4-201ENST00000422486 THOC2Q8NI27 1593 aaKnown RBP16.49■□□□□ 0.23
RPL4P4-201ENST00000422486 MSH5O43196 834 aa16.48■□□□□ 0.23
RPL4P4-201ENST00000422486 NESP48681 1621 aa16.48■□□□□ 0.23
RPL4P4-201ENST00000422486 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
RPL4P4-201ENST00000422486 SMARCA2P51531 1590 aa16.27■□□□□ 0.2
RPL4P4-201ENST00000422486 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
RPL4P4-201ENST00000422486 PIAS4Q8N2W9 510 aaPredicted RBP16.24■□□□□ 0.19
RPL4P4-201ENST00000422486 BAZ1AQ9NRL2 1556 aaPredicted RBP16.23■□□□□ 0.19
RPL4P4-201ENST00000422486 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
RPL4P4-201ENST00000422486 ATAD2BQ9ULI0 1458 aa16.2■□□□□ 0.18
RPL4P4-201ENST00000422486 HMGXB3Q12766 1538 aa16.16■□□□□ 0.18
RPL4P4-201ENST00000422486 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
RPL4P4-201ENST00000422486 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
RPL4P4-201ENST00000422486 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
RPL4P4-201ENST00000422486 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
RPL4P4-201ENST00000422486 POTEDQ86YR6 584 aa16.15■□□□□ 0.18
RPL4P4-201ENST00000422486 PDS5BQ9NTI5 1447 aa16.08■□□□□ 0.16
RPL4P4-201ENST00000422486 PPP6R1Q9UPN7 881 aa16.05■□□□□ 0.16
RPL4P4-201ENST00000422486 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
RPL4P4-201ENST00000422486 WDR62O43379 1518 aa16.02■□□□□ 0.15
RPL4P4-201ENST00000422486 MRC2Q9UBG0 1479 aa16.02■□□□□ 0.15
RPL4P4-201ENST00000422486 ADRA2BP18089 450 aa15.99■□□□□ 0.15
RPL4P4-201ENST00000422486 ARHGEF11O15085 1522 aa15.98■□□□□ 0.15
RPL4P4-201ENST00000422486 BAZ1BQ9UIG0 1483 aaKnown RBP15.96■□□□□ 0.14
RPL4P4-201ENST00000422486 SMARCA4P51532 1647 aa15.94■□□□□ 0.14
RPL4P4-201ENST00000422486 CYB5RLQ6IPT4 315 aa15.92■□□□□ 0.14
RPL4P4-201ENST00000422486 CADPSQ9ULU8 1353 aa15.83■□□□□ 0.12
RPL4P4-201ENST00000422486 ILDR1Q86SU0 546 aaPredicted RBP15.81■□□□□ 0.12
RPL4P4-201ENST00000422486 PEG3Q9GZU2 1588 aa15.79■□□□□ 0.12
RPL4P4-201ENST00000422486 ARAP1Q96P48 1450 aa15.77■□□□□ 0.11
RPL4P4-201ENST00000422486 CEP164Q9UPV0 1460 aa15.74■□□□□ 0.11
RPL4P4-201ENST00000422486 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
RPL4P4-201ENST00000422486 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
RPL4P4-201ENST00000422486 ZNF608Q9ULD9 1512 aaPredicted RBP15.59■□□□□ 0.09
RPL4P4-201ENST00000422486 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
RPL4P4-201ENST00000422486 RSF1Q96T23 1441 aaPredicted RBP15.54■□□□□ 0.08
RPL4P4-201ENST00000422486 CHD1O14646 1710 aa15.54■□□□□ 0.08
RPL4P4-201ENST00000422486 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
RPL4P4-201ENST00000422486 CFTRP13569 1480 aa15.46■□□□□ 0.06
RPL4P4-201ENST00000422486 EIF4G3O43432 1585 aaKnown RBP15.43■□□□□ 0.06
RPL4P4-201ENST00000422486 FBLN2P98095 1184 aa15.36■□□□□ 0.05
RPL4P4-201ENST00000422486 WIZO95785 1651 aa15.32■□□□□ 0.04
RPL4P4-201ENST00000422486 AQRO60306 1485 aaKnown RBP eCLIP15.31■□□□□ 0.04
RPL4P4-201ENST00000422486 CLASP1Q7Z460 1538 aa15.31■□□□□ 0.04
RPL4P4-201ENST00000422486 KDM4FA0A1W2PPD8 638 aa15.3■□□□□ 0.04
RPL4P4-201ENST00000422486 TOPBP1Q92547 1522 aa15.26■□□□□ 0.03
RPL4P4-201ENST00000422486 PRDM2Q13029 1718 aa15.26■□□□□ 0.03
RPL4P4-201ENST00000422486 TARBP1Q13395 1621 aaKnown RBP15.23■□□□□ 0.03
RPL4P4-201ENST00000422486 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
RPL4P4-201ENST00000422486 KIF13AQ9H1H9 1805 aa15.2■□□□□ 0.02
RPL4P4-201ENST00000422486 SYNJ1O43426 1573 aa15.17■□□□□ 0.02
RPL4P4-201ENST00000422486 ABCC8Q09428 1581 aa15.12■□□□□ 0.01
RPL4P4-201ENST00000422486 DNMBPQ6XZF7 1577 aa15.11■□□□□ 0.01
RPL4P4-201ENST00000422486 SNAPC4Q5SXM2 1469 aa15.1■□□□□ 0.01
RPL4P4-201ENST00000422486 CHMP7Q8WUX9 453 aaPredicted RBP15.1■□□□□ 0.01
RPL4P4-201ENST00000422486 ERCC6L2Q5T890 1561 aa15.07■□□□□ 0
RPL4P4-201ENST00000422486 TDRD9Q8NDG6 1382 aaKnown RBP15.05■□□□□ -0
RPL4P4-201ENST00000422486 POLA1P09884 1462 aaPredicted RBP15.04■□□□□ -0
RPL4P4-201ENST00000422486 FBXO41Q8TF61 875 aa15.04■□□□□ -0
RPL4P4-201ENST00000422486 HECW2Q9P2P5 1572 aa15.02■□□□□ -0
RPL4P4-201ENST00000422486 TOP2AP11388 1531 aaKnown RBP15.02□□□□□ -0.01
RPL4P4-201ENST00000422486 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
RPL4P4-201ENST00000422486 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
RPL4P4-201ENST00000422486 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
RPL4P4-201ENST00000422486 KDM6BO15054 1643 aa14.96□□□□□ -0.01
RPL4P4-201ENST00000422486 WDR97A6NE52 1622 aa14.95□□□□□ -0.02
RPL4P4-201ENST00000422486 FAM69CQ0P6D2 419 aa14.94□□□□□ -0.02
RPL4P4-201ENST00000422486 LMTK3Q96Q04 1460 aa14.94□□□□□ -0.02
RPL4P4-201ENST00000422486 SOGA1O94964 1423 aa14.93□□□□□ -0.02
RPL4P4-201ENST00000422486 GRIN2BQ13224 1484 aa14.91□□□□□ -0.02
RPL4P4-201ENST00000422486 ABCC10Q5T3U5 1492 aa14.91□□□□□ -0.02
RPL4P4-201ENST00000422486 ADGRL1O94910 1474 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms