RNA–Protein interactions for RNA: ENST00000421406.1

AL390728.4-201, humanhuman

BASIC

Gene AL390728.4, Length 1,465 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.4-201ENST00000421406 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
AL390728.4-201ENST00000421406 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
AL390728.4-201ENST00000421406 NISCHQ9Y2I1 1504 aa21.49■■□□□ 1.03
AL390728.4-201ENST00000421406 SENP3Q9H4L4 574 aaPredicted RBP20.44■□□□□ 0.86
AL390728.4-201ENST00000421406 PHF23Q9BUL5 403 aaPredicted RBP20.08■□□□□ 0.81
AL390728.4-201ENST00000421406 CCDC180Q9P1Z9 1646 aa19.2■□□□□ 0.66
AL390728.4-201ENST00000421406 FOXD1Q16676 465 aa19.14■□□□□ 0.65
AL390728.4-201ENST00000421406 POTEDQ86YR6 584 aa19.02■□□□□ 0.63
AL390728.4-201ENST00000421406 ABCC9O60706 1549 aa18.91■□□□□ 0.62
AL390728.4-201ENST00000421406 MSH5O43196 834 aa18.19■□□□□ 0.5
AL390728.4-201ENST00000421406 RB1CC1Q8TDY2 1594 aa18.17■□□□□ 0.5
AL390728.4-201ENST00000421406 NACADO15069 1562 aa18.11■□□□□ 0.49
AL390728.4-201ENST00000421406 DCAF8L2P0C7V8 631 aa18.08■□□□□ 0.49
AL390728.4-201ENST00000421406 MYO15BQ96JP2 1530 aa17.94■□□□□ 0.46
AL390728.4-201ENST00000421406 ZCCHC6Q5VYS8 1495 aaKnown RBP17.85■□□□□ 0.45
AL390728.4-201ENST00000421406 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
AL390728.4-201ENST00000421406 PIAS4Q8N2W9 510 aaPredicted RBP17.72■□□□□ 0.43
AL390728.4-201ENST00000421406 UNC13AQ9UPW8 1703 aa17.68■□□□□ 0.42
AL390728.4-201ENST00000421406 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
AL390728.4-201ENST00000421406 BICRAQ9NZM4 1560 aa17.54■□□□□ 0.4
AL390728.4-201ENST00000421406 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
AL390728.4-201ENST00000421406 DNAJC5BQ9UF47 199 aa17.45■□□□□ 0.38
AL390728.4-201ENST00000421406 SHROOM4Q9ULL8 1493 aa17.45■□□□□ 0.38
AL390728.4-201ENST00000421406 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
AL390728.4-201ENST00000421406 ADRA2BP18089 450 aa17.26■□□□□ 0.35
AL390728.4-201ENST00000421406 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
AL390728.4-201ENST00000421406 EIF4G1Q04637 1599 aaKnown RBP17.13■□□□□ 0.33
AL390728.4-201ENST00000421406 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
AL390728.4-201ENST00000421406 CECR2Q9BXF3 1484 aa17.04■□□□□ 0.32
AL390728.4-201ENST00000421406 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
AL390728.4-201ENST00000421406 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
AL390728.4-201ENST00000421406 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
AL390728.4-201ENST00000421406 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
AL390728.4-201ENST00000421406 ATAD2BQ9ULI0 1458 aa16.66■□□□□ 0.26
AL390728.4-201ENST00000421406 HMGXB3Q12766 1538 aa16.59■□□□□ 0.25
AL390728.4-201ENST00000421406 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
AL390728.4-201ENST00000421406 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
AL390728.4-201ENST00000421406 MROH2BQ7Z745 1585 aa16.52■□□□□ 0.24
AL390728.4-201ENST00000421406 ERCC6Q03468 1493 aa16.37■□□□□ 0.21
AL390728.4-201ENST00000421406 WIZO95785 1651 aa16.34■□□□□ 0.21
AL390728.4-201ENST00000421406 RSF1Q96T23 1441 aaPredicted RBP16.3■□□□□ 0.2
AL390728.4-201ENST00000421406 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
AL390728.4-201ENST00000421406 NESP48681 1621 aa16.28■□□□□ 0.2
AL390728.4-201ENST00000421406 CUX2O14529 1486 aa16.24■□□□□ 0.19
AL390728.4-201ENST00000421406 PDS5BQ9NTI5 1447 aa16.23■□□□□ 0.19
AL390728.4-201ENST00000421406 CADPSQ9ULU8 1353 aa16.21■□□□□ 0.19
AL390728.4-201ENST00000421406 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
AL390728.4-201ENST00000421406 KIF21AQ7Z4S6 1674 aa16.11■□□□□ 0.17
AL390728.4-201ENST00000421406 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
AL390728.4-201ENST00000421406 THOC2Q8NI27 1593 aaKnown RBP16.08■□□□□ 0.16
AL390728.4-201ENST00000421406 MAPK8IP2Q13387 824 aaPredicted RBP16.07■□□□□ 0.16
AL390728.4-201ENST00000421406 CFTRP13569 1480 aa16.06■□□□□ 0.16
AL390728.4-201ENST00000421406 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
AL390728.4-201ENST00000421406 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
AL390728.4-201ENST00000421406 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.16
AL390728.4-201ENST00000421406 FANCD2Q9BXW9 1451 aa16.01■□□□□ 0.15
AL390728.4-201ENST00000421406 CCDC88BA6NC98 1476 aa15.99■□□□□ 0.15
AL390728.4-201ENST00000421406 WDR62O43379 1518 aa15.95■□□□□ 0.14
AL390728.4-201ENST00000421406 PRDM2Q13029 1718 aa15.93■□□□□ 0.14
AL390728.4-201ENST00000421406 DNAJC5Q9H3Z4 198 aa15.93■□□□□ 0.14
AL390728.4-201ENST00000421406 URB2Q14146 1524 aaKnown RBP15.82■□□□□ 0.12
AL390728.4-201ENST00000421406 SUPT5HO00267 1087 aaKnown RBP15.81■□□□□ 0.12
AL390728.4-201ENST00000421406 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
AL390728.4-201ENST00000421406 SCAF1Q9H7N4 1312 aaKnown RBP15.79■□□□□ 0.12
AL390728.4-201ENST00000421406 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
AL390728.4-201ENST00000421406 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
AL390728.4-201ENST00000421406 IFT140Q96RY7 1462 aa15.7■□□□□ 0.1
AL390728.4-201ENST00000421406 OSCARQ8IYS5 282 aa15.58■□□□□ 0.08
AL390728.4-201ENST00000421406 ZNF608Q9ULD9 1512 aaPredicted RBP15.57■□□□□ 0.08
AL390728.4-201ENST00000421406 POLA1P09884 1462 aaPredicted RBP15.57■□□□□ 0.08
AL390728.4-201ENST00000421406 SOGA1O94964 1423 aa15.55■□□□□ 0.08
AL390728.4-201ENST00000421406 TARBP1Q13395 1621 aaKnown RBP15.55■□□□□ 0.08
AL390728.4-201ENST00000421406 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
AL390728.4-201ENST00000421406 FGD5Q6ZNL6 1462 aa15.52■□□□□ 0.07
AL390728.4-201ENST00000421406 CUX1P39880 1505 aa15.52■□□□□ 0.07
AL390728.4-201ENST00000421406 DCAF8L1A6NGE4 600 aa15.49■□□□□ 0.07
AL390728.4-201ENST00000421406 AQRO60306 1485 aaKnown RBP eCLIP15.49■□□□□ 0.076e-15■■■■■ 150.9
AL390728.4-201ENST00000421406 RAD54L2Q9Y4B4 1467 aa15.49■□□□□ 0.07
AL390728.4-201ENST00000421406 WDR97A6NE52 1622 aa15.48■□□□□ 0.07
AL390728.4-201ENST00000421406 TDRD9Q8NDG6 1382 aaKnown RBP15.45■□□□□ 0.06
AL390728.4-201ENST00000421406 RNF39Q9H2S5 420 aa15.45■□□□□ 0.06
AL390728.4-201ENST00000421406 WRNQ14191 1432 aaPredicted RBP eCLIP15.41■□□□□ 0.06
AL390728.4-201ENST00000421406 FBLN2P98095 1184 aa15.4■□□□□ 0.06
AL390728.4-201ENST00000421406 GRIN2BQ13224 1484 aa15.38■□□□□ 0.05
AL390728.4-201ENST00000421406 TOP2BQ02880 1626 aa15.38■□□□□ 0.05
AL390728.4-201ENST00000421406 ABCA10Q8WWZ4 1543 aa15.37■□□□□ 0.05
AL390728.4-201ENST00000421406 CHD1O14646 1710 aa15.37■□□□□ 0.05
AL390728.4-201ENST00000421406 MAGI1Q96QZ7 1491 aaPredicted RBP15.36■□□□□ 0.05
AL390728.4-201ENST00000421406 BIVM-ERCC5R4GMW8 1640 aa15.36■□□□□ 0.05
AL390728.4-201ENST00000421406 GAPVD1Q14C86 1478 aa15.35■□□□□ 0.05
AL390728.4-201ENST00000421406 CHMP7Q8WUX9 453 aaPredicted RBP15.35■□□□□ 0.05
AL390728.4-201ENST00000421406 SNAPC4Q5SXM2 1469 aa15.35■□□□□ 0.05
AL390728.4-201ENST00000421406 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
AL390728.4-201ENST00000421406 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
AL390728.4-201ENST00000421406 PBRM1Q86U86 1689 aa15.3■□□□□ 0.04
AL390728.4-201ENST00000421406 SYNJ2O15056 1496 aa15.3■□□□□ 0.04
AL390728.4-201ENST00000421406 ABCA5Q8WWZ7 1642 aa15.29■□□□□ 0.04
AL390728.4-201ENST00000421406 RIMBP3CA6NJZ7 1639 aa15.27■□□□□ 0.03
AL390728.4-201ENST00000421406 RIMBP3BA6NNM3 1639 aa15.27■□□□□ 0.03
AL390728.4-201ENST00000421406 RIMBP3Q9UFD9 1639 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms