RNA–Protein interactions for RNA: ENST00000420694.1

LINC01058-201, Transcript of long intergenic non-protein coding RNA 1058, humanhuman

TSL 5 BASIC

Gene LINC01058, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01058-201ENST00000420694 NISCHQ9Y2I1 1504 aa17.17■□□□□ 0.34
LINC01058-201ENST00000420694 ABCC9O60706 1549 aa15.84■□□□□ 0.13
LINC01058-201ENST00000420694 CCDC180Q9P1Z9 1646 aa15.47■□□□□ 0.07
LINC01058-201ENST00000420694 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
LINC01058-201ENST00000420694 RB1CC1Q8TDY2 1594 aa14.89□□□□□ -0.03
LINC01058-201ENST00000420694 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
LINC01058-201ENST00000420694 NACADO15069 1562 aa14.73□□□□□ -0.05
LINC01058-201ENST00000420694 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
LINC01058-201ENST00000420694 UNC13AQ9UPW8 1703 aa14.58□□□□□ -0.08
LINC01058-201ENST00000420694 BICRAQ9NZM4 1560 aa14.53□□□□□ -0.08
LINC01058-201ENST00000420694 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
LINC01058-201ENST00000420694 CECR2Q9BXF3 1484 aa14.3□□□□□ -0.12
LINC01058-201ENST00000420694 CC2D2AQ9P2K1 1620 aa14.28□□□□□ -0.12
LINC01058-201ENST00000420694 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
LINC01058-201ENST00000420694 DNAJC5Q9H3Z4 198 aa14.17□□□□□ -0.14
LINC01058-201ENST00000420694 EIF4G1Q04637 1599 aaKnown RBP14.17□□□□□ -0.14
LINC01058-201ENST00000420694 ZCCHC6Q5VYS8 1495 aaKnown RBP14.15□□□□□ -0.14
LINC01058-201ENST00000420694 DCAF1Q9Y4B6 1507 aa14.14□□□□□ -0.15
LINC01058-201ENST00000420694 SCRIBQ14160 1630 aa14.12□□□□□ -0.15
LINC01058-201ENST00000420694 CUX2O14529 1486 aa13.74□□□□□ -0.21
LINC01058-201ENST00000420694 ERCC6Q03468 1493 aa13.66□□□□□ -0.22
LINC01058-201ENST00000420694 NCAPD3P42695 1498 aa13.64□□□□□ -0.23
LINC01058-201ENST00000420694 CHIC1Q5VXU3 224 aa13.57□□□□□ -0.24
LINC01058-201ENST00000420694 ATAD2BQ9ULI0 1458 aa13.56□□□□□ -0.24
LINC01058-201ENST00000420694 NESP48681 1621 aa13.54□□□□□ -0.24
LINC01058-201ENST00000420694 HMGXB3Q12766 1538 aa13.46□□□□□ -0.25
LINC01058-201ENST00000420694 SMARCA2P51531 1590 aa13.45□□□□□ -0.26
LINC01058-201ENST00000420694 SMARCA4P51532 1647 aa13.43□□□□□ -0.26
LINC01058-201ENST00000420694 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
LINC01058-201ENST00000420694 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
LINC01058-201ENST00000420694 BAZ1BQ9UIG0 1483 aaKnown RBP13.37□□□□□ -0.27
LINC01058-201ENST00000420694 AEBP2Q6ZN18 517 aaPredicted RBP13.36□□□□□ -0.27
LINC01058-201ENST00000420694 LAMC3Q9Y6N6 1575 aa13.33□□□□□ -0.28
LINC01058-201ENST00000420694 BAZ1AQ9NRL2 1556 aaPredicted RBP13.31□□□□□ -0.28
LINC01058-201ENST00000420694 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
LINC01058-201ENST00000420694 KIF21AQ7Z4S6 1674 aa13.3□□□□□ -0.28
LINC01058-201ENST00000420694 PDS5BQ9NTI5 1447 aa13.29□□□□□ -0.28
LINC01058-201ENST00000420694 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
LINC01058-201ENST00000420694 CADPSQ9ULU8 1353 aa13.22□□□□□ -0.29
LINC01058-201ENST00000420694 MRC2Q9UBG0 1479 aa13.19□□□□□ -0.3
LINC01058-201ENST00000420694 WDR62O43379 1518 aa13.17□□□□□ -0.3
LINC01058-201ENST00000420694 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
LINC01058-201ENST00000420694 CEP164Q9UPV0 1460 aa13.06□□□□□ -0.32
LINC01058-201ENST00000420694 WIZO95785 1651 aa13.05□□□□□ -0.32
LINC01058-201ENST00000420694 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
LINC01058-201ENST00000420694 CFTRP13569 1480 aa12.99□□□□□ -0.33
LINC01058-201ENST00000420694 URB2Q14146 1524 aaKnown RBP12.98□□□□□ -0.33
LINC01058-201ENST00000420694 RIMBP3CA6NJZ7 1639 aa12.94□□□□□ -0.34
LINC01058-201ENST00000420694 RIMBP3BA6NNM3 1639 aa12.94□□□□□ -0.34
LINC01058-201ENST00000420694 RIMBP3Q9UFD9 1639 aa12.94□□□□□ -0.34
LINC01058-201ENST00000420694 ZNF608Q9ULD9 1512 aaPredicted RBP12.88□□□□□ -0.35
LINC01058-201ENST00000420694 ARHGEF11O15085 1522 aa12.88□□□□□ -0.35
LINC01058-201ENST00000420694 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
LINC01058-201ENST00000420694 CYB5RLQ6IPT4 315 aa12.85□□□□□ -0.35
LINC01058-201ENST00000420694 TOP2AP11388 1531 aaKnown RBP12.84□□□□□ -0.35
LINC01058-201ENST00000420694 IFT140Q96RY7 1462 aa12.83□□□□□ -0.36
LINC01058-201ENST00000420694 TOPBP1Q92547 1522 aa12.78□□□□□ -0.36
LINC01058-201ENST00000420694 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
LINC01058-201ENST00000420694 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
LINC01058-201ENST00000420694 ARAP1Q96P48 1450 aa12.75□□□□□ -0.37
LINC01058-201ENST00000420694 CCDC88BA6NC98 1476 aa12.74□□□□□ -0.37
LINC01058-201ENST00000420694 EIF4G3O43432 1585 aaKnown RBP12.73□□□□□ -0.37
LINC01058-201ENST00000420694 AQRO60306 1485 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC01058-201ENST00000420694 CHD1O14646 1710 aa12.7□□□□□ -0.38
LINC01058-201ENST00000420694 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
LINC01058-201ENST00000420694 FBLN2P98095 1184 aa12.69□□□□□ -0.38
LINC01058-201ENST00000420694 TARBP1Q13395 1621 aaKnown RBP12.68□□□□□ -0.38
LINC01058-201ENST00000420694 DNMBPQ6XZF7 1577 aa12.67□□□□□ -0.38
LINC01058-201ENST00000420694 POLA1P09884 1462 aaPredicted RBP12.62□□□□□ -0.39
LINC01058-201ENST00000420694 RAD54L2Q9Y4B4 1467 aa12.61□□□□□ -0.39
LINC01058-201ENST00000420694 TDRD9Q8NDG6 1382 aaKnown RBP12.61□□□□□ -0.39
LINC01058-201ENST00000420694 CLASP1Q7Z460 1538 aa12.57□□□□□ -0.4
LINC01058-201ENST00000420694 SOGA1O94964 1423 aa12.57□□□□□ -0.4
LINC01058-201ENST00000420694 SNAPC4Q5SXM2 1469 aa12.55□□□□□ -0.4
LINC01058-201ENST00000420694 CHMP7Q8WUX9 453 aaPredicted RBP12.54□□□□□ -0.4
LINC01058-201ENST00000420694 FGD5Q6ZNL6 1462 aa12.5□□□□□ -0.41
LINC01058-201ENST00000420694 SYNJ1O43426 1573 aa12.5□□□□□ -0.41
LINC01058-201ENST00000420694 MAGI1Q96QZ7 1491 aaPredicted RBP12.49□□□□□ -0.41
LINC01058-201ENST00000420694 GRIN2BQ13224 1484 aa12.47□□□□□ -0.41
LINC01058-201ENST00000420694 SYNJ2O15056 1496 aa12.46□□□□□ -0.41
LINC01058-201ENST00000420694 GAPVD1Q14C86 1478 aa12.46□□□□□ -0.41
LINC01058-201ENST00000420694 WDR97A6NE52 1622 aa12.46□□□□□ -0.41
LINC01058-201ENST00000420694 CUX1P39880 1505 aa12.46□□□□□ -0.42
LINC01058-201ENST00000420694 ERCC6L2Q5T890 1561 aa12.39□□□□□ -0.43
LINC01058-201ENST00000420694 PBRM1Q86U86 1689 aa12.36□□□□□ -0.43
LINC01058-201ENST00000420694 ABCA10Q8WWZ4 1543 aa12.34□□□□□ -0.43
LINC01058-201ENST00000420694 ABCA5Q8WWZ7 1642 aa12.33□□□□□ -0.44
LINC01058-201ENST00000420694 CEP170Q5SW79 1584 aa12.31□□□□□ -0.44
LINC01058-201ENST00000420694 GRIN2AQ12879 1464 aa12.31□□□□□ -0.44
LINC01058-201ENST00000420694 NUP160Q12769 1436 aa12.3□□□□□ -0.44
LINC01058-201ENST00000420694 KIF13AQ9H1H9 1805 aa12.27□□□□□ -0.45
LINC01058-201ENST00000420694 SHROOM2Q13796 1616 aa12.26□□□□□ -0.45
LINC01058-201ENST00000420694 ADAMTS12P58397 1594 aa12.25□□□□□ -0.45
LINC01058-201ENST00000420694 FHAD1B1AJZ9 1412 aa12.22□□□□□ -0.45
LINC01058-201ENST00000420694 WRNQ14191 1432 aaPredicted RBP eCLIP12.22□□□□□ -0.45
LINC01058-201ENST00000420694 PRG4Q92954 1404 aaPredicted RBP12.21□□□□□ -0.45
LINC01058-201ENST00000420694 JPH4Q96JJ6 628 aa12.21□□□□□ -0.45
LINC01058-201ENST00000420694 KDM4FA0A1W2PPD8 638 aa12.2□□□□□ -0.46
LINC01058-201ENST00000420694 FAM69CQ0P6D2 419 aa12.2□□□□□ -0.46
LINC01058-201ENST00000420694 ABCC10Q5T3U5 1492 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms