RNA–Protein interactions for RNA: ENST00000420581.6

LMOD3-201, Transcript of leiomodin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMOD3, Length 4,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMOD3-201ENST00000420581 CCDC180Q9P1Z9 1646 aa13.89□□□□□ -0.19
LMOD3-201ENST00000420581 NISCHQ9Y2I1 1504 aa13.87□□□□□ -0.19
LMOD3-201ENST00000420581 MYO15BQ96JP2 1530 aa13.17□□□□□ -0.3
LMOD3-201ENST00000420581 DCAF1Q9Y4B6 1507 aa12.8□□□□□ -0.36
LMOD3-201ENST00000420581 SHROOM4Q9ULL8 1493 aa12.78□□□□□ -0.36
LMOD3-201ENST00000420581 UNC13AQ9UPW8 1703 aa12.78□□□□□ -0.36
LMOD3-201ENST00000420581 NACADO15069 1562 aa12.2□□□□□ -0.46
LMOD3-201ENST00000420581 BICRAQ9NZM4 1560 aa12.15□□□□□ -0.47
LMOD3-201ENST00000420581 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
LMOD3-201ENST00000420581 PRDM2Q13029 1718 aa11.94□□□□□ -0.5
LMOD3-201ENST00000420581 ZCCHC6Q5VYS8 1495 aaKnown RBP11.9□□□□□ -0.5
LMOD3-201ENST00000420581 RB1CC1Q8TDY2 1594 aa11.85□□□□□ -0.51
LMOD3-201ENST00000420581 SMARCA2P51531 1590 aa11.58□□□□□ -0.56
LMOD3-201ENST00000420581 HMGXB3Q12766 1538 aa11.42□□□□□ -0.58
LMOD3-201ENST00000420581 WDR97A6NE52 1622 aa11.38□□□□□ -0.59
LMOD3-201ENST00000420581 EIF4G1Q04637 1599 aaKnown RBP11.29□□□□□ -0.6
LMOD3-201ENST00000420581 THOC2Q8NI27 1593 aaKnown RBP11.23□□□□□ -0.61
LMOD3-201ENST00000420581 ABCC9O60706 1549 aa11.16□□□□□ -0.62
LMOD3-201ENST00000420581 SCRIBQ14160 1630 aa11.15□□□□□ -0.63
LMOD3-201ENST00000420581 SMARCA4P51532 1647 aa11.06□□□□□ -0.64
LMOD3-201ENST00000420581 CC2D2AQ9P2K1 1620 aa11.03□□□□□ -0.64
LMOD3-201ENST00000420581 NCAPD3P42695 1498 aa10.92□□□□□ -0.66
LMOD3-201ENST00000420581 LAMC3Q9Y6N6 1575 aa10.91□□□□□ -0.66
LMOD3-201ENST00000420581 BAZ1AQ9NRL2 1556 aaPredicted RBP10.91□□□□□ -0.66
LMOD3-201ENST00000420581 WDR62O43379 1518 aa10.87□□□□□ -0.67
LMOD3-201ENST00000420581 CUX2O14529 1486 aa10.78□□□□□ -0.68
LMOD3-201ENST00000420581 BAZ1BQ9UIG0 1483 aaKnown RBP10.77□□□□□ -0.69
LMOD3-201ENST00000420581 KIF21AQ7Z4S6 1674 aa10.75□□□□□ -0.69
LMOD3-201ENST00000420581 SHROOM2Q13796 1616 aa10.71□□□□□ -0.69
LMOD3-201ENST00000420581 BIVM-ERCC5R4GMW8 1640 aa10.71□□□□□ -0.69
LMOD3-201ENST00000420581 TARBP1Q13395 1621 aaKnown RBP10.65□□□□□ -0.7
LMOD3-201ENST00000420581 TOP2AP11388 1531 aaKnown RBP10.61□□□□□ -0.71
LMOD3-201ENST00000420581 ABCA5Q8WWZ7 1642 aa10.53□□□□□ -0.72
LMOD3-201ENST00000420581 ATAD2BQ9ULI0 1458 aa10.5□□□□□ -0.73
LMOD3-201ENST00000420581 CLASP1Q7Z460 1538 aa10.46□□□□□ -0.73
LMOD3-201ENST00000420581 PBRM1Q86U86 1689 aa10.44□□□□□ -0.74
LMOD3-201ENST00000420581 CFTRP13569 1480 aa10.35□□□□□ -0.75
LMOD3-201ENST00000420581 HRCP23327 699 aa10.3□□□□□ -0.76
LMOD3-201ENST00000420581 WIZO95785 1651 aa10.29□□□□□ -0.76
LMOD3-201ENST00000420581 CHIC1Q5VXU3 224 aa10.28□□□□□ -0.76
LMOD3-201ENST00000420581 MROH2BQ7Z745 1585 aa10.27□□□□□ -0.77
LMOD3-201ENST00000420581 DNMBPQ6XZF7 1577 aa10.26□□□□□ -0.77
LMOD3-201ENST00000420581 NESP48681 1621 aa10.26□□□□□ -0.77
LMOD3-201ENST00000420581 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
LMOD3-201ENST00000420581 PPRC1Q5VV67 1664 aaKnown RBP10.19□□□□□ -0.78
LMOD3-201ENST00000420581 CHD1O14646 1710 aa10.17□□□□□ -0.78
LMOD3-201ENST00000420581 BCORL1Q5H9F3 1711 aa10.16□□□□□ -0.78
LMOD3-201ENST00000420581 KIF13AQ9H1H9 1805 aa10.15□□□□□ -0.78
LMOD3-201ENST00000420581 EIF4G3O43432 1585 aaKnown RBP10.13□□□□□ -0.79
LMOD3-201ENST00000420581 CECR2Q9BXF3 1484 aa10.12□□□□□ -0.79
LMOD3-201ENST00000420581 ABCC8Q09428 1581 aa10.09□□□□□ -0.79
LMOD3-201ENST00000420581 ADAMTS12P58397 1594 aa10.06□□□□□ -0.8
LMOD3-201ENST00000420581 CUL7Q14999 1698 aa10.06□□□□□ -0.8
LMOD3-201ENST00000420581 MRC2Q9UBG0 1479 aa10.05□□□□□ -0.8
LMOD3-201ENST00000420581 RUSC2Q8N2Y8 1516 aa10.03□□□□□ -0.8
LMOD3-201ENST00000420581 URB2Q14146 1524 aaKnown RBP10.02□□□□□ -0.8
LMOD3-201ENST00000420581 GLI2P10070 1586 aa10.02□□□□□ -0.81
LMOD3-201ENST00000420581 PPARGC1BQ86YN6 1023 aaKnown RBP10.01□□□□□ -0.81
LMOD3-201ENST00000420581 KDM5BQ9UGL1 1544 aa10.01□□□□□ -0.81
LMOD3-201ENST00000420581 CTTNBP2Q8WZ74 1663 aa9.99□□□□□ -0.81
LMOD3-201ENST00000420581 ERICH3Q5RHP9 1530 aa9.98□□□□□ -0.81
LMOD3-201ENST00000420581 AEBP2Q6ZN18 517 aaPredicted RBP9.97□□□□□ -0.81
LMOD3-201ENST00000420581 MAP3K4Q9Y6R4 1608 aa9.95□□□□□ -0.82
LMOD3-201ENST00000420581 DNAJC5BQ9UF47 199 aa9.93□□□□□ -0.82
LMOD3-201ENST00000420581 ABCA10Q8WWZ4 1543 aa9.93□□□□□ -0.82
LMOD3-201ENST00000420581 RIMBP3CA6NJZ7 1639 aa9.92□□□□□ -0.82
LMOD3-201ENST00000420581 RIMBP3BA6NNM3 1639 aa9.92□□□□□ -0.82
LMOD3-201ENST00000420581 RIMBP3Q9UFD9 1639 aa9.92□□□□□ -0.82
LMOD3-201ENST00000420581 SAMD9Q5K651 1589 aa9.9□□□□□ -0.82
LMOD3-201ENST00000420581 RSF1Q96T23 1441 aaPredicted RBP9.9□□□□□ -0.83
LMOD3-201ENST00000420581 ADCY10Q96PN6 1610 aa9.88□□□□□ -0.83
LMOD3-201ENST00000420581 MAPKBP1O60336 1514 aa9.88□□□□□ -0.83
LMOD3-201ENST00000420581 IFT140Q96RY7 1462 aa9.84□□□□□ -0.83
LMOD3-201ENST00000420581 LRRIQ1Q96JM4 1722 aa9.84□□□□□ -0.83
LMOD3-201ENST00000420581 CUX1P39880 1505 aa9.83□□□□□ -0.84
LMOD3-201ENST00000420581 PCGF6Q9BYE7 350 aa9.82□□□□□ -0.84
LMOD3-201ENST00000420581 TOPBP1Q92547 1522 aa9.82□□□□□ -0.84
LMOD3-201ENST00000420581 REREQ9P2R6 1566 aa9.81□□□□□ -0.84
LMOD3-201ENST00000420581 SCAF1Q9H7N4 1312 aaKnown RBP9.8□□□□□ -0.84
LMOD3-201ENST00000420581 MAGI1Q96QZ7 1491 aaPredicted RBP9.79□□□□□ -0.84
LMOD3-201ENST00000420581 NUP160Q12769 1436 aa9.79□□□□□ -0.84
LMOD3-201ENST00000420581 CEP170Q5SW79 1584 aa9.77□□□□□ -0.84
LMOD3-201ENST00000420581 SUPT5HO00267 1087 aaKnown RBP9.75□□□□□ -0.85
LMOD3-201ENST00000420581 UHRF1BP1LA0JNW5 1464 aa9.74□□□□□ -0.85
LMOD3-201ENST00000420581 CADPSQ9ULU8 1353 aa9.73□□□□□ -0.85
LMOD3-201ENST00000420581 CCDC88BA6NC98 1476 aa9.72□□□□□ -0.85
LMOD3-201ENST00000420581 SYNJ1O43426 1573 aa9.71□□□□□ -0.85
LMOD3-201ENST00000420581 PELP1Q8IZL8 1130 aaKnown RBP9.71□□□□□ -0.86
LMOD3-201ENST00000420581 CFAP43Q8NDM7 1665 aa9.69□□□□□ -0.86
LMOD3-201ENST00000420581 ARAP3Q8WWN8 1544 aa9.69□□□□□ -0.86
LMOD3-201ENST00000420581 KDM5AP29375 1690 aaKnown RBP9.68□□□□□ -0.86
LMOD3-201ENST00000420581 UGGT2Q9NYU1 1516 aa9.67□□□□□ -0.86
LMOD3-201ENST00000420581 CEP164Q9UPV0 1460 aa9.64□□□□□ -0.87
LMOD3-201ENST00000420581 TRIM26Q12899 539 aaPredicted RBP9.63□□□□□ -0.87
LMOD3-201ENST00000420581 LOC105371045A0A1W2PR82 267 aa9.63□□□□□ -0.87
LMOD3-201ENST00000420581 MROH2AA6NES4 1674 aa9.62□□□□□ -0.87
LMOD3-201ENST00000420581 FANCD2Q9BXW9 1451 aa9.62□□□□□ -0.87
LMOD3-201ENST00000420581 DIP2BQ9P265 1576 aa9.62□□□□□ -0.87
LMOD3-201ENST00000420581 KIF21BO75037 1637 aa9.62□□□□□ -0.87
LMOD3-201ENST00000420581 PDS5BQ9NTI5 1447 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms