RNA–Protein interactions for RNA: ENST00000420442.5

HSCB-203, Transcript of HscB mitochondrial iron-sulfur cluster cochaperone, humanhuman

TSL 5

Gene HSCB, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSCB-203ENST00000420442 NISCHQ9Y2I1 1504 aa33.6■■■□□ 2.97
HSCB-203ENST00000420442 ABCC9O60706 1549 aa30.83■■■□□ 2.53
HSCB-203ENST00000420442 CCDC180Q9P1Z9 1646 aa30.45■■■□□ 2.47
HSCB-203ENST00000420442 DNAJC5BQ9UF47 199 aa29.28■■■□□ 2.28
HSCB-203ENST00000420442 RB1CC1Q8TDY2 1594 aa29.22■■■□□ 2.27
HSCB-203ENST00000420442 NACADO15069 1562 aa28.9■■■□□ 2.22
HSCB-203ENST00000420442 PABPN1Q86U42 306 aaKnown RBP eCLIP28.59■■■□□ 2.17
HSCB-203ENST00000420442 DCAF8L2P0C7V8 631 aa28.58■■■□□ 2.17
HSCB-203ENST00000420442 UNC13AQ9UPW8 1703 aa28.53■■■□□ 2.16
HSCB-203ENST00000420442 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
HSCB-203ENST00000420442 BICRAQ9NZM4 1560 aa28.28■■■□□ 2.12
HSCB-203ENST00000420442 SHROOM4Q9ULL8 1493 aa27.99■■■□□ 2.07
HSCB-203ENST00000420442 CC2D2AQ9P2K1 1620 aa27.86■■■□□ 2.05
HSCB-203ENST00000420442 CECR2Q9BXF3 1484 aa27.86■■■□□ 2.05
HSCB-203ENST00000420442 DCAF1Q9Y4B6 1507 aa27.77■■■□□ 2.04
HSCB-203ENST00000420442 ZCCHC6Q5VYS8 1495 aaKnown RBP27.73■■■□□ 2.03
HSCB-203ENST00000420442 EIF4G1Q04637 1599 aaKnown RBP27.69■■■□□ 2.02
HSCB-203ENST00000420442 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
HSCB-203ENST00000420442 DNAJC5Q9H3Z4 198 aa27.38■■□□□ 1.97
HSCB-203ENST00000420442 CUX2O14529 1486 aa26.87■■□□□ 1.89
HSCB-203ENST00000420442 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
HSCB-203ENST00000420442 NCAPD3P42695 1498 aa26.64■■□□□ 1.86
HSCB-203ENST00000420442 ATAD2BQ9ULI0 1458 aa26.46■■□□□ 1.83
HSCB-203ENST00000420442 SMARCA2P51531 1590 aa26.43■■□□□ 1.82
HSCB-203ENST00000420442 HMGXB3Q12766 1538 aa26.42■■□□□ 1.82
HSCB-203ENST00000420442 SMARCA4P51532 1647 aa26.33■■□□□ 1.81
HSCB-203ENST00000420442 NESP48681 1621 aa26.32■■□□□ 1.8
HSCB-203ENST00000420442 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
HSCB-203ENST00000420442 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.79
HSCB-203ENST00000420442 LAMC3Q9Y6N6 1575 aa26.18■■□□□ 1.78
HSCB-203ENST00000420442 BAZ1AQ9NRL2 1556 aaPredicted RBP26.16■■□□□ 1.78
HSCB-203ENST00000420442 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
HSCB-203ENST00000420442 PDS5BQ9NTI5 1447 aa26.04■■□□□ 1.76
HSCB-203ENST00000420442 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
HSCB-203ENST00000420442 TRIM41Q8WV44 630 aa25.95■■□□□ 1.74
HSCB-203ENST00000420442 MROH2BQ7Z745 1585 aa25.84■■□□□ 1.73
HSCB-203ENST00000420442 CADPSQ9ULU8 1353 aa25.81■■□□□ 1.72
HSCB-203ENST00000420442 MRC2Q9UBG0 1479 aa25.8■■□□□ 1.72
HSCB-203ENST00000420442 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
HSCB-203ENST00000420442 WDR62O43379 1518 aa25.74■■□□□ 1.71
HSCB-203ENST00000420442 CEP164Q9UPV0 1460 aa25.61■■□□□ 1.69
HSCB-203ENST00000420442 OSCARQ8IYS5 282 aa25.55■■□□□ 1.68
HSCB-203ENST00000420442 WIZO95785 1651 aa25.54■■□□□ 1.68
HSCB-203ENST00000420442 FANCD2Q9BXW9 1451 aa25.51■■□□□ 1.67
HSCB-203ENST00000420442 CFTRP13569 1480 aa25.4■■□□□ 1.66
HSCB-203ENST00000420442 URB2Q14146 1524 aaKnown RBP25.29■■□□□ 1.64
HSCB-203ENST00000420442 RIMBP3CA6NJZ7 1639 aa25.24■■□□□ 1.63
HSCB-203ENST00000420442 RIMBP3BA6NNM3 1639 aa25.24■■□□□ 1.63
HSCB-203ENST00000420442 RIMBP3Q9UFD9 1639 aa25.24■■□□□ 1.63
HSCB-203ENST00000420442 TOP2AP11388 1531 aaKnown RBP25.21■■□□□ 1.63
HSCB-203ENST00000420442 PRDM2Q13029 1718 aa25.2■■□□□ 1.63
HSCB-203ENST00000420442 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
HSCB-203ENST00000420442 IFT140Q96RY7 1462 aa25.12■■□□□ 1.61
HSCB-203ENST00000420442 ARHGEF11O15085 1522 aa25.1■■□□□ 1.61
HSCB-203ENST00000420442 ZNF608Q9ULD9 1512 aaPredicted RBP25.04■■□□□ 1.6
HSCB-203ENST00000420442 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
HSCB-203ENST00000420442 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
HSCB-203ENST00000420442 CYB5RLQ6IPT4 315 aa24.95■■□□□ 1.58
HSCB-203ENST00000420442 EIF4G3O43432 1585 aaKnown RBP24.94■■□□□ 1.58
HSCB-203ENST00000420442 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
HSCB-203ENST00000420442 TRHP20396 242 aaPredicted RBP24.88■■□□□ 1.57
HSCB-203ENST00000420442 CHD1O14646 1710 aa24.87■■□□□ 1.57
HSCB-203ENST00000420442 DNMBPQ6XZF7 1577 aa24.85■■□□□ 1.57
HSCB-203ENST00000420442 ARAP1Q96P48 1450 aa24.79■■□□□ 1.56
HSCB-203ENST00000420442 TARBP1Q13395 1621 aaKnown RBP24.78■■□□□ 1.56
HSCB-203ENST00000420442 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.56
HSCB-203ENST00000420442 FBLN2P98095 1184 aa24.76■■□□□ 1.55
HSCB-203ENST00000420442 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
HSCB-203ENST00000420442 POLA1P09884 1462 aaPredicted RBP24.66■■□□□ 1.54
HSCB-203ENST00000420442 WDR97A6NE52 1622 aa24.6■■□□□ 1.53
HSCB-203ENST00000420442 SOGA1O94964 1423 aa24.57■■□□□ 1.52
HSCB-203ENST00000420442 SYNJ1O43426 1573 aa24.55■■□□□ 1.52
HSCB-203ENST00000420442 RAD54L2Q9Y4B4 1467 aa24.55■■□□□ 1.52
HSCB-203ENST00000420442 TDRD9Q8NDG6 1382 aaKnown RBP24.54■■□□□ 1.52
HSCB-203ENST00000420442 SNAPC4Q5SXM2 1469 aa24.54■■□□□ 1.52
HSCB-203ENST00000420442 CLASP1Q7Z460 1538 aa24.54■■□□□ 1.52
HSCB-203ENST00000420442 CHMP7Q8WUX9 453 aaPredicted RBP24.53■■□□□ 1.52
HSCB-203ENST00000420442 MAGI1Q96QZ7 1491 aaPredicted RBP24.5■■□□□ 1.51
HSCB-203ENST00000420442 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
HSCB-203ENST00000420442 GRIN2BQ13224 1484 aa24.43■■□□□ 1.5
HSCB-203ENST00000420442 SYNJ2O15056 1496 aa24.41■■□□□ 1.5
HSCB-203ENST00000420442 GAPVD1Q14C86 1478 aa24.32■■□□□ 1.48
HSCB-203ENST00000420442 PBRM1Q86U86 1689 aa24.32■■□□□ 1.48
HSCB-203ENST00000420442 CUX1P39880 1505 aa24.31■■□□□ 1.48
HSCB-203ENST00000420442 ABCA10Q8WWZ4 1543 aa24.16■■□□□ 1.46
HSCB-203ENST00000420442 ABCA5Q8WWZ7 1642 aa24.16■■□□□ 1.46
HSCB-203ENST00000420442 GRIN2AQ12879 1464 aa24.09■■□□□ 1.45
HSCB-203ENST00000420442 ERCC6L2Q5T890 1561 aa24.06■■□□□ 1.44
HSCB-203ENST00000420442 CEP170Q5SW79 1584 aa24.05■■□□□ 1.44
HSCB-203ENST00000420442 NUP160Q12769 1436 aa24.02■■□□□ 1.44
HSCB-203ENST00000420442 ADAMTS12P58397 1594 aa24.01■■□□□ 1.43
HSCB-203ENST00000420442 SHROOM2Q13796 1616 aa23.99■■□□□ 1.43
HSCB-203ENST00000420442 WRNQ14191 1432 aaPredicted RBP eCLIP23.99■■□□□ 1.43
HSCB-203ENST00000420442 KIF13AQ9H1H9 1805 aa23.97■■□□□ 1.43
HSCB-203ENST00000420442 FHAD1B1AJZ9 1412 aa23.95■■□□□ 1.42
HSCB-203ENST00000420442 ERICH3Q5RHP9 1530 aa23.88■■□□□ 1.41
HSCB-203ENST00000420442 BIVM-ERCC5R4GMW8 1640 aa23.86■■□□□ 1.41
HSCB-203ENST00000420442 TOP2BQ02880 1626 aa23.85■■□□□ 1.41
HSCB-203ENST00000420442 PRG4Q92954 1404 aaPredicted RBP23.84■■□□□ 1.41
HSCB-203ENST00000420442 NPM1P06748 294 aaKnown RBP eCLIP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms