RNA–Protein interactions for RNA: ENST00000420189.1

RETREG2-202, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 1,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-202ENST00000420189 NISCHQ9Y2I1 1504 aa29.01■■■□□ 2.24
RETREG2-202ENST00000420189 CCDC180Q9P1Z9 1646 aa25.58■■□□□ 1.69
RETREG2-202ENST00000420189 ABCC9O60706 1549 aa25.46■■□□□ 1.67
RETREG2-202ENST00000420189 DCAF8L2P0C7V8 631 aa24.3■■□□□ 1.48
RETREG2-202ENST00000420189 RB1CC1Q8TDY2 1594 aa24.27■■□□□ 1.48
RETREG2-202ENST00000420189 ZCCHC6Q5VYS8 1495 aaKnown RBP24.2■■□□□ 1.47
RETREG2-202ENST00000420189 NACADO15069 1562 aa24.11■■□□□ 1.45
RETREG2-202ENST00000420189 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
RETREG2-202ENST00000420189 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
RETREG2-202ENST00000420189 UNC13AQ9UPW8 1703 aa23.77■■□□□ 1.4
RETREG2-202ENST00000420189 PABPN1Q86U42 306 aaKnown RBP eCLIP23.73■■□□□ 1.39
RETREG2-202ENST00000420189 DNAJC5BQ9UF47 199 aa23.72■■□□□ 1.39
RETREG2-202ENST00000420189 BICRAQ9NZM4 1560 aa23.54■■□□□ 1.36
RETREG2-202ENST00000420189 SCRIBQ14160 1630 aa23.47■■□□□ 1.35
RETREG2-202ENST00000420189 SHROOM4Q9ULL8 1493 aa23.2■■□□□ 1.3
RETREG2-202ENST00000420189 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
RETREG2-202ENST00000420189 EIF4G1Q04637 1599 aaKnown RBP22.97■■□□□ 1.27
RETREG2-202ENST00000420189 CECR2Q9BXF3 1484 aa22.91■■□□□ 1.26
RETREG2-202ENST00000420189 BAZ1AQ9NRL2 1556 aaPredicted RBP22.45■■□□□ 1.18
RETREG2-202ENST00000420189 SMARCA4P51532 1647 aa22.43■■□□□ 1.18
RETREG2-202ENST00000420189 MROH2BQ7Z745 1585 aa22.39■■□□□ 1.17
RETREG2-202ENST00000420189 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
RETREG2-202ENST00000420189 NCAPD3P42695 1498 aa22.25■■□□□ 1.15
RETREG2-202ENST00000420189 SMARCA2P51531 1590 aa22.24■■□□□ 1.15
RETREG2-202ENST00000420189 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
RETREG2-202ENST00000420189 PEG3Q9GZU2 1588 aa22.19■■□□□ 1.14
RETREG2-202ENST00000420189 BAZ1BQ9UIG0 1483 aaKnown RBP22.13■■□□□ 1.13
RETREG2-202ENST00000420189 WIZO95785 1651 aa22.12■■□□□ 1.13
RETREG2-202ENST00000420189 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
RETREG2-202ENST00000420189 ERCC6Q03468 1493 aa22■■□□□ 1.11
RETREG2-202ENST00000420189 SUPT5HO00267 1087 aaKnown RBP21.92■■□□□ 1.1
RETREG2-202ENST00000420189 NESP48681 1621 aa21.91■■□□□ 1.1
RETREG2-202ENST00000420189 TOP2AP11388 1531 aaKnown RBP21.9■■□□□ 1.1
RETREG2-202ENST00000420189 CUX2O14529 1486 aa21.85■■□□□ 1.09
RETREG2-202ENST00000420189 LAMC3Q9Y6N6 1575 aa21.75■■□□□ 1.07
RETREG2-202ENST00000420189 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
RETREG2-202ENST00000420189 DNAJC5Q9H3Z4 198 aa21.67■■□□□ 1.06
RETREG2-202ENST00000420189 KIF21AQ7Z4S6 1674 aa21.66■■□□□ 1.06
RETREG2-202ENST00000420189 THOC2Q8NI27 1593 aaKnown RBP21.65■■□□□ 1.06
RETREG2-202ENST00000420189 CADPSQ9ULU8 1353 aa21.65■■□□□ 1.06
RETREG2-202ENST00000420189 PDS5BQ9NTI5 1447 aa21.62■■□□□ 1.05
RETREG2-202ENST00000420189 CFTRP13569 1480 aa21.53■■□□□ 1.04
RETREG2-202ENST00000420189 MRC2Q9UBG0 1479 aa21.43■■□□□ 1.02
RETREG2-202ENST00000420189 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
RETREG2-202ENST00000420189 FANCD2Q9BXW9 1451 aa21.38■■□□□ 1.01
RETREG2-202ENST00000420189 WDR62O43379 1518 aa21.37■■□□□ 1.01
RETREG2-202ENST00000420189 PRDM2Q13029 1718 aa21.23■□□□□ 0.99
RETREG2-202ENST00000420189 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
RETREG2-202ENST00000420189 TOPBP1Q92547 1522 aa21.05■□□□□ 0.96
RETREG2-202ENST00000420189 ABCC8Q09428 1581 aa21.02■□□□□ 0.96
RETREG2-202ENST00000420189 DNMBPQ6XZF7 1577 aa21.02■□□□□ 0.95
RETREG2-202ENST00000420189 CUX1P39880 1505 aa20.98■□□□□ 0.95
RETREG2-202ENST00000420189 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.94
RETREG2-202ENST00000420189 IFT140Q96RY7 1462 aa20.93■□□□□ 0.94
RETREG2-202ENST00000420189 ZNF608Q9ULD9 1512 aaPredicted RBP20.91■□□□□ 0.94
RETREG2-202ENST00000420189 POLA1P09884 1462 aaPredicted RBP20.9■□□□□ 0.94
RETREG2-202ENST00000420189 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
RETREG2-202ENST00000420189 OSCARQ8IYS5 282 aa20.88■□□□□ 0.93
RETREG2-202ENST00000420189 TRIM41Q8WV44 630 aa20.87■□□□□ 0.93
RETREG2-202ENST00000420189 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
RETREG2-202ENST00000420189 RAD54L2Q9Y4B4 1467 aa20.84■□□□□ 0.93
RETREG2-202ENST00000420189 SOGA1O94964 1423 aa20.84■□□□□ 0.93
RETREG2-202ENST00000420189 EIF4G3O43432 1585 aaKnown RBP20.83■□□□□ 0.92
RETREG2-202ENST00000420189 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
RETREG2-202ENST00000420189 TARBP1Q13395 1621 aaKnown RBP20.77■□□□□ 0.92
RETREG2-202ENST00000420189 BIVM-ERCC5R4GMW8 1640 aa20.77■□□□□ 0.92
RETREG2-202ENST00000420189 AQRO60306 1485 aaKnown RBP eCLIP20.74■□□□□ 0.91
RETREG2-202ENST00000420189 TDRD9Q8NDG6 1382 aaKnown RBP20.73■□□□□ 0.91
RETREG2-202ENST00000420189 ABCA10Q8WWZ4 1543 aa20.67■□□□□ 0.9
RETREG2-202ENST00000420189 CHD1O14646 1710 aa20.66■□□□□ 0.9
RETREG2-202ENST00000420189 RIMBP3CA6NJZ7 1639 aa20.63■□□□□ 0.89
RETREG2-202ENST00000420189 RIMBP3BA6NNM3 1639 aa20.63■□□□□ 0.89
RETREG2-202ENST00000420189 RIMBP3Q9UFD9 1639 aa20.63■□□□□ 0.89
RETREG2-202ENST00000420189 FBLN2P98095 1184 aa20.62■□□□□ 0.89
RETREG2-202ENST00000420189 WDR97A6NE52 1622 aa20.59■□□□□ 0.89
RETREG2-202ENST00000420189 GAPVD1Q14C86 1478 aa20.58■□□□□ 0.89
RETREG2-202ENST00000420189 ARHGEF11O15085 1522 aa20.56■□□□□ 0.88
RETREG2-202ENST00000420189 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
RETREG2-202ENST00000420189 GRIN2BQ13224 1484 aa20.55■□□□□ 0.88
RETREG2-202ENST00000420189 SNAPC4Q5SXM2 1469 aa20.54■□□□□ 0.88
RETREG2-202ENST00000420189 ABCA5Q8WWZ7 1642 aa20.53■□□□□ 0.88
RETREG2-202ENST00000420189 KIF27Q86VH2 1401 aa20.49■□□□□ 0.87
RETREG2-202ENST00000420189 MAGI1Q96QZ7 1491 aaPredicted RBP20.47■□□□□ 0.87
RETREG2-202ENST00000420189 PBRM1Q86U86 1689 aa20.46■□□□□ 0.87
RETREG2-202ENST00000420189 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
RETREG2-202ENST00000420189 CYB5RLQ6IPT4 315 aa20.42■□□□□ 0.86
RETREG2-202ENST00000420189 IGF1RP08069 1367 aa20.41■□□□□ 0.86
RETREG2-202ENST00000420189 ERICH3Q5RHP9 1530 aa20.4■□□□□ 0.86
RETREG2-202ENST00000420189 RUSC2Q8N2Y8 1516 aa20.4■□□□□ 0.86
RETREG2-202ENST00000420189 SYNJ2O15056 1496 aa20.4■□□□□ 0.86
RETREG2-202ENST00000420189 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
RETREG2-202ENST00000420189 CLASP1Q7Z460 1538 aa20.36■□□□□ 0.85
RETREG2-202ENST00000420189 FHAD1B1AJZ9 1412 aa20.35■□□□□ 0.85
RETREG2-202ENST00000420189 ADAMTS12P58397 1594 aa20.33■□□□□ 0.84
RETREG2-202ENST00000420189 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
RETREG2-202ENST00000420189 FAM9AQ8IZU1 332 aaPredicted RBP20.28■□□□□ 0.84
RETREG2-202ENST00000420189 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
RETREG2-202ENST00000420189 CSRNP3Q8WYN3 585 aa20.23■□□□□ 0.83
RETREG2-202ENST00000420189 CUL7Q14999 1698 aa20.22■□□□□ 0.83
RETREG2-202ENST00000420189 EEA1Q15075 1411 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms