RNA–Protein interactions for RNA: ENST00000419642.1

ZDHHC3-204, Transcript of zinc finger DHHC-type containing 3, humanhuman

TSL 5

Gene ZDHHC3, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3-204ENST00000419642 NISCHQ9Y2I1 1504 aa35.38■■■■□ 3.25
ZDHHC3-204ENST00000419642 ABCC9O60706 1549 aa32.47■■■□□ 2.79
ZDHHC3-204ENST00000419642 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
ZDHHC3-204ENST00000419642 DNAJC5BQ9UF47 199 aa30.85■■■□□ 2.53
ZDHHC3-204ENST00000419642 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
ZDHHC3-204ENST00000419642 NACADO15069 1562 aa30.41■■■□□ 2.46
ZDHHC3-204ENST00000419642 UNC13AQ9UPW8 1703 aa30.17■■■□□ 2.42
ZDHHC3-204ENST00000419642 PABPN1Q86U42 306 aaKnown RBP eCLIP30.08■■■□□ 2.41
ZDHHC3-204ENST00000419642 DCAF8L2P0C7V8 631 aa29.98■■■□□ 2.39
ZDHHC3-204ENST00000419642 BICRAQ9NZM4 1560 aa29.86■■■□□ 2.37
ZDHHC3-204ENST00000419642 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
ZDHHC3-204ENST00000419642 SHROOM4Q9ULL8 1493 aa29.42■■■□□ 2.3
ZDHHC3-204ENST00000419642 CC2D2AQ9P2K1 1620 aa29.37■■■□□ 2.29
ZDHHC3-204ENST00000419642 CECR2Q9BXF3 1484 aa29.32■■■□□ 2.28
ZDHHC3-204ENST00000419642 DCAF1Q9Y4B6 1507 aa29.23■■■□□ 2.27
ZDHHC3-204ENST00000419642 ZCCHC6Q5VYS8 1495 aaKnown RBP29.22■■■□□ 2.27
ZDHHC3-204ENST00000419642 EIF4G1Q04637 1599 aaKnown RBP29.17■■■□□ 2.26
ZDHHC3-204ENST00000419642 SCRIBQ14160 1630 aa29.14■■■□□ 2.26
ZDHHC3-204ENST00000419642 DNAJC5Q9H3Z4 198 aa28.76■■■□□ 2.19
ZDHHC3-204ENST00000419642 CUX2O14529 1486 aa28.24■■■□□ 2.11
ZDHHC3-204ENST00000419642 ERCC6Q03468 1493 aa28.09■■■□□ 2.09
ZDHHC3-204ENST00000419642 NCAPD3P42695 1498 aa28.02■■■□□ 2.08
ZDHHC3-204ENST00000419642 ATAD2BQ9ULI0 1458 aa27.85■■■□□ 2.05
ZDHHC3-204ENST00000419642 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
ZDHHC3-204ENST00000419642 SMARCA2P51531 1590 aa27.8■■■□□ 2.04
ZDHHC3-204ENST00000419642 SMARCA4P51532 1647 aa27.76■■■□□ 2.03
ZDHHC3-204ENST00000419642 NESP48681 1621 aa27.74■■■□□ 2.03
ZDHHC3-204ENST00000419642 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
ZDHHC3-204ENST00000419642 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
ZDHHC3-204ENST00000419642 LAMC3Q9Y6N6 1575 aa27.54■■■□□ 2
ZDHHC3-204ENST00000419642 BAZ1AQ9NRL2 1556 aaPredicted RBP27.53■■■□□ 2
ZDHHC3-204ENST00000419642 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
ZDHHC3-204ENST00000419642 PEG3Q9GZU2 1588 aa27.49■■□□□ 1.99
ZDHHC3-204ENST00000419642 PDS5BQ9NTI5 1447 aa27.33■■□□□ 1.97
ZDHHC3-204ENST00000419642 TRIM41Q8WV44 630 aa27.25■■□□□ 1.95
ZDHHC3-204ENST00000419642 MROH2BQ7Z745 1585 aa27.25■■□□□ 1.95
ZDHHC3-204ENST00000419642 MRC2Q9UBG0 1479 aa27.15■■□□□ 1.94
ZDHHC3-204ENST00000419642 WDR62O43379 1518 aa27.13■■□□□ 1.93
ZDHHC3-204ENST00000419642 CADPSQ9ULU8 1353 aa27.11■■□□□ 1.93
ZDHHC3-204ENST00000419642 WIZO95785 1651 aa26.95■■□□□ 1.91
ZDHHC3-204ENST00000419642 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
ZDHHC3-204ENST00000419642 FANCD2Q9BXW9 1451 aa26.84■■□□□ 1.89
ZDHHC3-204ENST00000419642 OSCARQ8IYS5 282 aa26.8■■□□□ 1.88
ZDHHC3-204ENST00000419642 CFTRP13569 1480 aa26.73■■□□□ 1.87
ZDHHC3-204ENST00000419642 URB2Q14146 1524 aaKnown RBP26.66■■□□□ 1.86
ZDHHC3-204ENST00000419642 PRDM2Q13029 1718 aa26.62■■□□□ 1.85
ZDHHC3-204ENST00000419642 RIMBP3CA6NJZ7 1639 aa26.61■■□□□ 1.85
ZDHHC3-204ENST00000419642 RIMBP3BA6NNM3 1639 aa26.61■■□□□ 1.85
ZDHHC3-204ENST00000419642 RIMBP3Q9UFD9 1639 aa26.61■■□□□ 1.85
ZDHHC3-204ENST00000419642 TOP2AP11388 1531 aaKnown RBP26.55■■□□□ 1.84
ZDHHC3-204ENST00000419642 RSF1Q96T23 1441 aaPredicted RBP26.46■■□□□ 1.83
ZDHHC3-204ENST00000419642 ARHGEF11O15085 1522 aa26.43■■□□□ 1.82
ZDHHC3-204ENST00000419642 IFT140Q96RY7 1462 aa26.42■■□□□ 1.82
ZDHHC3-204ENST00000419642 ZNF608Q9ULD9 1512 aaPredicted RBP26.4■■□□□ 1.82
ZDHHC3-204ENST00000419642 EIF4G3O43432 1585 aaKnown RBP26.31■■□□□ 1.8
ZDHHC3-204ENST00000419642 TOPBP1Q92547 1522 aa26.29■■□□□ 1.8
ZDHHC3-204ENST00000419642 CHD1O14646 1710 aa26.28■■□□□ 1.8
ZDHHC3-204ENST00000419642 ABCC8Q09428 1581 aa26.22■■□□□ 1.79
ZDHHC3-204ENST00000419642 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
ZDHHC3-204ENST00000419642 CYB5RLQ6IPT4 315 aa26.19■■□□□ 1.78
ZDHHC3-204ENST00000419642 DNMBPQ6XZF7 1577 aa26.19■■□□□ 1.78
ZDHHC3-204ENST00000419642 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.77
ZDHHC3-204ENST00000419642 ARAP1Q96P48 1450 aa26.12■■□□□ 1.77
ZDHHC3-204ENST00000419642 TRHP20396 242 aaPredicted RBP26.08■■□□□ 1.77
ZDHHC3-204ENST00000419642 AQRO60306 1485 aaKnown RBP eCLIP26.07■■□□□ 1.76
ZDHHC3-204ENST00000419642 FBLN2P98095 1184 aa25.98■■□□□ 1.75
ZDHHC3-204ENST00000419642 POLA1P09884 1462 aaPredicted RBP25.98■■□□□ 1.75
ZDHHC3-204ENST00000419642 WDR97A6NE52 1622 aa25.88■■□□□ 1.73
ZDHHC3-204ENST00000419642 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
ZDHHC3-204ENST00000419642 RAD54L2Q9Y4B4 1467 aa25.86■■□□□ 1.73
ZDHHC3-204ENST00000419642 SNAPC4Q5SXM2 1469 aa25.83■■□□□ 1.73
ZDHHC3-204ENST00000419642 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
ZDHHC3-204ENST00000419642 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
ZDHHC3-204ENST00000419642 SOGA1O94964 1423 aa25.81■■□□□ 1.72
ZDHHC3-204ENST00000419642 MAGI1Q96QZ7 1491 aaPredicted RBP25.76■■□□□ 1.71
ZDHHC3-204ENST00000419642 FGD5Q6ZNL6 1462 aa25.74■■□□□ 1.71
ZDHHC3-204ENST00000419642 AEBP2Q6ZN18 517 aaPredicted RBP25.72■■□□□ 1.71
ZDHHC3-204ENST00000419642 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
ZDHHC3-204ENST00000419642 GRIN2BQ13224 1484 aa25.69■■□□□ 1.7
ZDHHC3-204ENST00000419642 PBRM1Q86U86 1689 aa25.68■■□□□ 1.7
ZDHHC3-204ENST00000419642 SYNJ2O15056 1496 aa25.67■■□□□ 1.7
ZDHHC3-204ENST00000419642 CUX1P39880 1505 aa25.64■■□□□ 1.7
ZDHHC3-204ENST00000419642 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
ZDHHC3-204ENST00000419642 ABCA5Q8WWZ7 1642 aa25.49■■□□□ 1.67
ZDHHC3-204ENST00000419642 ABCA10Q8WWZ4 1543 aa25.42■■□□□ 1.66
ZDHHC3-204ENST00000419642 ERCC6L2Q5T890 1561 aa25.4■■□□□ 1.66
ZDHHC3-204ENST00000419642 GRIN2AQ12879 1464 aa25.36■■□□□ 1.65
ZDHHC3-204ENST00000419642 CEP170Q5SW79 1584 aa25.35■■□□□ 1.65
ZDHHC3-204ENST00000419642 KIF13AQ9H1H9 1805 aa25.33■■□□□ 1.64
ZDHHC3-204ENST00000419642 ADAMTS12P58397 1594 aa25.32■■□□□ 1.64
ZDHHC3-204ENST00000419642 SHROOM2Q13796 1616 aa25.31■■□□□ 1.64
ZDHHC3-204ENST00000419642 NUP160Q12769 1436 aa25.29■■□□□ 1.64
ZDHHC3-204ENST00000419642 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.62
ZDHHC3-204ENST00000419642 BIVM-ERCC5R4GMW8 1640 aa25.17■■□□□ 1.62
ZDHHC3-204ENST00000419642 FHAD1B1AJZ9 1412 aa25.17■■□□□ 1.62
ZDHHC3-204ENST00000419642 TOP2BQ02880 1626 aa25.13■■□□□ 1.61
ZDHHC3-204ENST00000419642 ERICH3Q5RHP9 1530 aa25.12■■□□□ 1.61
ZDHHC3-204ENST00000419642 PRG4Q92954 1404 aaPredicted RBP25.07■■□□□ 1.6
ZDHHC3-204ENST00000419642 ABCC10Q5T3U5 1492 aa25■■□□□ 1.59
ZDHHC3-204ENST00000419642 MAPKBP1O60336 1514 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms