RNA–Protein interactions for RNA: ENST00000419436.1

PAXIP1-203, Transcript of PAX interacting protein 1, humanhuman

TSL 4

Gene PAXIP1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXIP1-203ENST00000419436 AEBP2Q6ZN18 517 aaPredicted RBP17.18■□□□□ 0.34
PAXIP1-203ENST00000419436 CHIC1Q5VXU3 224 aa17.03■□□□□ 0.32
PAXIP1-203ENST00000419436 NISCHQ9Y2I1 1504 aa15.62■□□□□ 0.09
PAXIP1-203ENST00000419436 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
PAXIP1-203ENST00000419436 ABCC9O60706 1549 aa14.68□□□□□ -0.06
PAXIP1-203ENST00000419436 SENP3Q9H4L4 574 aaPredicted RBP14.65□□□□□ -0.06
PAXIP1-203ENST00000419436 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
PAXIP1-203ENST00000419436 CCDC180Q9P1Z9 1646 aa14.13□□□□□ -0.15
PAXIP1-203ENST00000419436 PLPPR3Q6T4P5 718 aa13.98□□□□□ -0.17
PAXIP1-203ENST00000419436 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
PAXIP1-203ENST00000419436 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
PAXIP1-203ENST00000419436 FOXD1Q16676 465 aa13.51□□□□□ -0.25
PAXIP1-203ENST00000419436 UNC13AQ9UPW8 1703 aa13.47□□□□□ -0.25
PAXIP1-203ENST00000419436 DCAF8L2P0C7V8 631 aa13.47□□□□□ -0.25
PAXIP1-203ENST00000419436 NACADO15069 1562 aa13.44□□□□□ -0.26
PAXIP1-203ENST00000419436 BICRAQ9NZM4 1560 aa13.37□□□□□ -0.27
PAXIP1-203ENST00000419436 CECR2Q9BXF3 1484 aa13.2□□□□□ -0.3
PAXIP1-203ENST00000419436 CC2D2AQ9P2K1 1620 aa13.19□□□□□ -0.3
PAXIP1-203ENST00000419436 ADRA2BP18089 450 aa13.17□□□□□ -0.3
PAXIP1-203ENST00000419436 DNAJC5Q9H3Z4 198 aa13.16□□□□□ -0.3
PAXIP1-203ENST00000419436 PPP6R1Q9UPN7 881 aa13.12□□□□□ -0.31
PAXIP1-203ENST00000419436 MYO15BQ96JP2 1530 aa13.04□□□□□ -0.32
PAXIP1-203ENST00000419436 EIF4G1Q04637 1599 aaKnown RBP13.03□□□□□ -0.32
PAXIP1-203ENST00000419436 SCRIBQ14160 1630 aa13.01□□□□□ -0.33
PAXIP1-203ENST00000419436 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
PAXIP1-203ENST00000419436 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
PAXIP1-203ENST00000419436 ZCCHC6Q5VYS8 1495 aaKnown RBP12.86□□□□□ -0.35
PAXIP1-203ENST00000419436 DCAF1Q9Y4B6 1507 aa12.77□□□□□ -0.37
PAXIP1-203ENST00000419436 CUX2O14529 1486 aa12.65□□□□□ -0.38
PAXIP1-203ENST00000419436 ERCC6Q03468 1493 aa12.63□□□□□ -0.39
PAXIP1-203ENST00000419436 TRIM41Q8WV44 630 aa12.54□□□□□ -0.4
PAXIP1-203ENST00000419436 NESP48681 1621 aa12.52□□□□□ -0.4
PAXIP1-203ENST00000419436 MSH5O43196 834 aa12.46□□□□□ -0.41
PAXIP1-203ENST00000419436 NCAPD3P42695 1498 aa12.42□□□□□ -0.42
PAXIP1-203ENST00000419436 THOC2Q8NI27 1593 aaKnown RBP12.4□□□□□ -0.42
PAXIP1-203ENST00000419436 ATAD2BQ9ULI0 1458 aa12.39□□□□□ -0.43
PAXIP1-203ENST00000419436 SMARCA2P51531 1590 aa12.37□□□□□ -0.43
PAXIP1-203ENST00000419436 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
PAXIP1-203ENST00000419436 PPP4R3CPQ6ZMV5 832 aa12.31□□□□□ -0.44
PAXIP1-203ENST00000419436 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
PAXIP1-203ENST00000419436 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
PAXIP1-203ENST00000419436 BAZ1BQ9UIG0 1483 aaKnown RBP12.25□□□□□ -0.45
PAXIP1-203ENST00000419436 KCNA4P22459 653 aa12.24□□□□□ -0.45
PAXIP1-203ENST00000419436 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
PAXIP1-203ENST00000419436 BAZ1AQ9NRL2 1556 aaPredicted RBP12.15□□□□□ -0.46
PAXIP1-203ENST00000419436 SCAF1Q9H7N4 1312 aaKnown RBP12.14□□□□□ -0.47
PAXIP1-203ENST00000419436 PDS5BQ9NTI5 1447 aa12.14□□□□□ -0.47
PAXIP1-203ENST00000419436 NCBP3Q53F19 620 aaKnown RBP12.12□□□□□ -0.47
PAXIP1-203ENST00000419436 MRC2Q9UBG0 1479 aa12.12□□□□□ -0.47
PAXIP1-203ENST00000419436 MROH2BQ7Z745 1585 aa12.11□□□□□ -0.47
PAXIP1-203ENST00000419436 WDR62O43379 1518 aa12.09□□□□□ -0.47
PAXIP1-203ENST00000419436 PEG3Q9GZU2 1588 aa12.09□□□□□ -0.47
PAXIP1-203ENST00000419436 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
PAXIP1-203ENST00000419436 OSCARQ8IYS5 282 aa12.04□□□□□ -0.48
PAXIP1-203ENST00000419436 RIMBP3CA6NJZ7 1639 aa12.02□□□□□ -0.49
PAXIP1-203ENST00000419436 RIMBP3BA6NNM3 1639 aa12.02□□□□□ -0.49
PAXIP1-203ENST00000419436 RIMBP3Q9UFD9 1639 aa12.02□□□□□ -0.49
PAXIP1-203ENST00000419436 CEP164Q9UPV0 1460 aa11.98□□□□□ -0.49
PAXIP1-203ENST00000419436 WIZO95785 1651 aa11.97□□□□□ -0.49
PAXIP1-203ENST00000419436 FANCD2Q9BXW9 1451 aa11.95□□□□□ -0.5
PAXIP1-203ENST00000419436 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
PAXIP1-203ENST00000419436 URB2Q14146 1524 aaKnown RBP11.93□□□□□ -0.5
PAXIP1-203ENST00000419436 ARHGEF11O15085 1522 aa11.91□□□□□ -0.5
PAXIP1-203ENST00000419436 ZNF608Q9ULD9 1512 aaPredicted RBP11.88□□□□□ -0.51
PAXIP1-203ENST00000419436 CYB5RLQ6IPT4 315 aa11.88□□□□□ -0.51
PAXIP1-203ENST00000419436 TRHP20396 242 aaPredicted RBP11.87□□□□□ -0.51
PAXIP1-203ENST00000419436 NPM3O75607 178 aaKnown RBP11.86□□□□□ -0.51
PAXIP1-203ENST00000419436 MAPK8IP2Q13387 824 aaPredicted RBP11.86□□□□□ -0.51
PAXIP1-203ENST00000419436 CFTRP13569 1480 aa11.83□□□□□ -0.52
PAXIP1-203ENST00000419436 ARAP1Q96P48 1450 aa11.8□□□□□ -0.52
PAXIP1-203ENST00000419436 CHD1O14646 1710 aa11.77□□□□□ -0.53
PAXIP1-203ENST00000419436 SLC4A1APQ9BWU0 796 aaKnown RBP11.75□□□□□ -0.53
PAXIP1-203ENST00000419436 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
PAXIP1-203ENST00000419436 IFT140Q96RY7 1462 aa11.73□□□□□ -0.53
PAXIP1-203ENST00000419436 FBLN2P98095 1184 aa11.71□□□□□ -0.53
PAXIP1-203ENST00000419436 AQRO60306 1485 aaKnown RBP eCLIP11.7□□□□□ -0.54
PAXIP1-203ENST00000419436 TOP2AP11388 1531 aaKnown RBP11.7□□□□□ -0.54
PAXIP1-203ENST00000419436 TOPBP1Q92547 1522 aa11.7□□□□□ -0.54
PAXIP1-203ENST00000419436 PRDM2Q13029 1718 aa11.69□□□□□ -0.54
PAXIP1-203ENST00000419436 DMRT2Q9Y5R5 561 aa11.69□□□□□ -0.54
PAXIP1-203ENST00000419436 EHMT2Q96KQ7 1210 aa11.67□□□□□ -0.54
PAXIP1-203ENST00000419436 RSF1Q96T23 1441 aaPredicted RBP11.67□□□□□ -0.54
PAXIP1-203ENST00000419436 RNF216Q9NWF9 866 aaPredicted RBP11.64□□□□□ -0.55
PAXIP1-203ENST00000419436 TARBP1Q13395 1621 aaKnown RBP11.62□□□□□ -0.55
PAXIP1-203ENST00000419436 CCDC88BA6NC98 1476 aa11.61□□□□□ -0.55
PAXIP1-203ENST00000419436 DNMBPQ6XZF7 1577 aa11.59□□□□□ -0.55
PAXIP1-203ENST00000419436 RAD54L2Q9Y4B4 1467 aa11.59□□□□□ -0.55
PAXIP1-203ENST00000419436 TDRD9Q8NDG6 1382 aaKnown RBP11.56□□□□□ -0.56
PAXIP1-203ENST00000419436 CLASP1Q7Z460 1538 aa11.56□□□□□ -0.56
PAXIP1-203ENST00000419436 POLA1P09884 1462 aaPredicted RBP11.56□□□□□ -0.56
PAXIP1-203ENST00000419436 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
PAXIP1-203ENST00000419436 ABCC8Q09428 1581 aa11.5□□□□□ -0.57
PAXIP1-203ENST00000419436 HOXD11P31277 338 aaPredicted RBP11.5□□□□□ -0.57
PAXIP1-203ENST00000419436 CHMP7Q8WUX9 453 aaPredicted RBP11.48□□□□□ -0.57
PAXIP1-203ENST00000419436 SOGA1O94964 1423 aa11.48□□□□□ -0.57
PAXIP1-203ENST00000419436 SYNJ1O43426 1573 aa11.48□□□□□ -0.57
PAXIP1-203ENST00000419436 ERCC6L2Q5T890 1561 aa11.47□□□□□ -0.57
PAXIP1-203ENST00000419436 GAPVD1Q14C86 1478 aa11.47□□□□□ -0.57
PAXIP1-203ENST00000419436 FGD5Q6ZNL6 1462 aa11.44□□□□□ -0.58
PAXIP1-203ENST00000419436 SYNJ2O15056 1496 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms