RNA–Protein interactions for RNA: ENST00000419249.2

AGRN-202, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-202ENST00000419249 NISCHQ9Y2I1 1504 aa44.41■■■■■ 4.7
AGRN-202ENST00000419249 CCDC180Q9P1Z9 1646 aa39.52■■■■□ 3.92
AGRN-202ENST00000419249 ABCC9O60706 1549 aa38.67■■■■□ 3.78
AGRN-202ENST00000419249 RB1CC1Q8TDY2 1594 aa37.21■■■■□ 3.55
AGRN-202ENST00000419249 NACADO15069 1562 aa37.15■■■■□ 3.54
AGRN-202ENST00000419249 ZCCHC6Q5VYS8 1495 aaKnown RBP37.01■■■■□ 3.52
AGRN-202ENST00000419249 DCAF8L2P0C7V8 631 aa36.99■■■■□ 3.51
AGRN-202ENST00000419249 MYO15BQ96JP2 1530 aa36.97■■■■□ 3.51
AGRN-202ENST00000419249 DCAF1Q9Y4B6 1507 aa36.83■■■■□ 3.49
AGRN-202ENST00000419249 UNC13AQ9UPW8 1703 aa36.39■■■■□ 3.42
AGRN-202ENST00000419249 BICRAQ9NZM4 1560 aa36.1■■■■□ 3.37
AGRN-202ENST00000419249 PABPN1Q86U42 306 aaKnown RBP eCLIP36.09■■■■□ 3.37
AGRN-202ENST00000419249 SCRIBQ14160 1630 aa36.01■■■■□ 3.35
AGRN-202ENST00000419249 SHROOM4Q9ULL8 1493 aa35.74■■■■□ 3.31
AGRN-202ENST00000419249 DNAJC5BQ9UF47 199 aa35.55■■■■□ 3.28
AGRN-202ENST00000419249 EIF4G1Q04637 1599 aaKnown RBP35.15■■■■□ 3.22
AGRN-202ENST00000419249 CC2D2AQ9P2K1 1620 aa35.01■■■■□ 3.19
AGRN-202ENST00000419249 CECR2Q9BXF3 1484 aa34.78■■■■□ 3.16
AGRN-202ENST00000419249 SMARCA4P51532 1647 aa34.45■■■■□ 3.11
AGRN-202ENST00000419249 BAZ1AQ9NRL2 1556 aaPredicted RBP34.42■■■■□ 3.1
AGRN-202ENST00000419249 NCAPD3P42695 1498 aa34.27■■■■□ 3.08
AGRN-202ENST00000419249 ATAD2BQ9ULI0 1458 aa34.27■■■■□ 3.08
AGRN-202ENST00000419249 SMARCA2P51531 1590 aa34.23■■■■□ 3.07
AGRN-202ENST00000419249 MROH2BQ7Z745 1585 aa34.19■■■■□ 3.06
AGRN-202ENST00000419249 PEG3Q9GZU2 1588 aa34.14■■■■□ 3.06
AGRN-202ENST00000419249 HMGXB3Q12766 1538 aa34.11■■■■□ 3.05
AGRN-202ENST00000419249 BAZ1BQ9UIG0 1483 aaKnown RBP33.98■■■■□ 3.03
AGRN-202ENST00000419249 RSF1Q96T23 1441 aaPredicted RBP33.87■■■■□ 3.01
AGRN-202ENST00000419249 WIZO95785 1651 aa33.81■■■■□ 3
AGRN-202ENST00000419249 TOP2AP11388 1531 aaKnown RBP33.49■■■□□ 2.95
AGRN-202ENST00000419249 NESP48681 1621 aa33.45■■■□□ 2.95
AGRN-202ENST00000419249 LAMC3Q9Y6N6 1575 aa33.4■■■□□ 2.94
AGRN-202ENST00000419249 ERCC6Q03468 1493 aa33.35■■■□□ 2.93
AGRN-202ENST00000419249 CADPSQ9ULU8 1353 aa33.25■■■□□ 2.91
AGRN-202ENST00000419249 PDS5BQ9NTI5 1447 aa33.15■■■□□ 2.9
AGRN-202ENST00000419249 CCDC88BA6NC98 1476 aa33.1■■■□□ 2.89
AGRN-202ENST00000419249 KIF21AQ7Z4S6 1674 aa33.09■■■□□ 2.89
AGRN-202ENST00000419249 CUX2O14529 1486 aa33.06■■■□□ 2.88
AGRN-202ENST00000419249 CFTRP13569 1480 aa33.05■■■□□ 2.88
AGRN-202ENST00000419249 THOC2Q8NI27 1593 aaKnown RBP33■■■□□ 2.87
AGRN-202ENST00000419249 SUPT5HO00267 1087 aaKnown RBP33■■■□□ 2.87
AGRN-202ENST00000419249 FANCD2Q9BXW9 1451 aa32.87■■■□□ 2.85
AGRN-202ENST00000419249 CEP164Q9UPV0 1460 aa32.85■■■□□ 2.85
AGRN-202ENST00000419249 PRDM2Q13029 1718 aa32.85■■■□□ 2.85
AGRN-202ENST00000419249 MRC2Q9UBG0 1479 aa32.82■■■□□ 2.84
AGRN-202ENST00000419249 WDR62O43379 1518 aa32.73■■■□□ 2.83
AGRN-202ENST00000419249 URB2Q14146 1524 aaKnown RBP32.56■■■□□ 2.8
AGRN-202ENST00000419249 ABCC8Q09428 1581 aa32.37■■■□□ 2.77
AGRN-202ENST00000419249 TOPBP1Q92547 1522 aa32.34■■■□□ 2.77
AGRN-202ENST00000419249 DNMBPQ6XZF7 1577 aa32.32■■■□□ 2.76
AGRN-202ENST00000419249 IFT140Q96RY7 1462 aa32.16■■■□□ 2.74
AGRN-202ENST00000419249 DNAJC5Q9H3Z4 198 aa32.11■■■□□ 2.73
AGRN-202ENST00000419249 CUX1P39880 1505 aa32.07■■■□□ 2.72
AGRN-202ENST00000419249 POLA1P09884 1462 aaPredicted RBP32.06■■■□□ 2.72
AGRN-202ENST00000419249 TARBP1Q13395 1621 aaKnown RBP32.02■■■□□ 2.72
AGRN-202ENST00000419249 ZNF608Q9ULD9 1512 aaPredicted RBP32.01■■■□□ 2.72
AGRN-202ENST00000419249 FGD5Q6ZNL6 1462 aa31.97■■■□□ 2.71
AGRN-202ENST00000419249 WRNQ14191 1432 aaPredicted RBP eCLIP31.92■■■□□ 2.7
AGRN-202ENST00000419249 EIF4G3O43432 1585 aaKnown RBP31.92■■■□□ 2.7
AGRN-202ENST00000419249 SOGA1O94964 1423 aa31.91■■■□□ 2.7
AGRN-202ENST00000419249 RAD54L2Q9Y4B4 1467 aa31.91■■■□□ 2.7
AGRN-202ENST00000419249 TOP2BQ02880 1626 aa31.83■■■□□ 2.69
AGRN-202ENST00000419249 BIVM-ERCC5R4GMW8 1640 aa31.82■■■□□ 2.68
AGRN-202ENST00000419249 AQRO60306 1485 aaKnown RBP eCLIP31.81■■■□□ 2.684e-10■■■■□ 21.8
AGRN-202ENST00000419249 WDR97A6NE52 1622 aa31.79■■■□□ 2.68
AGRN-202ENST00000419249 SYNJ1O43426 1573 aa31.78■■■□□ 2.68
AGRN-202ENST00000419249 TDRD9Q8NDG6 1382 aaKnown RBP31.73■■■□□ 2.67
AGRN-202ENST00000419249 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.66
AGRN-202ENST00000419249 OSCARQ8IYS5 282 aa31.63■■■□□ 2.65
AGRN-202ENST00000419249 GRIN2BQ13224 1484 aa31.57■■■□□ 2.64
AGRN-202ENST00000419249 ABCA5Q8WWZ7 1642 aa31.57■■■□□ 2.64
AGRN-202ENST00000419249 GAPVD1Q14C86 1478 aa31.55■■■□□ 2.64
AGRN-202ENST00000419249 SNAPC4Q5SXM2 1469 aa31.53■■■□□ 2.64
AGRN-202ENST00000419249 CHD1O14646 1710 aa31.53■■■□□ 2.64
AGRN-202ENST00000419249 PBRM1Q86U86 1689 aa31.53■■■□□ 2.64
AGRN-202ENST00000419249 MAGI1Q96QZ7 1491 aaPredicted RBP31.51■■■□□ 2.63
AGRN-202ENST00000419249 FBLN2P98095 1184 aa31.4■■■□□ 2.62
AGRN-202ENST00000419249 SYNJ2O15056 1496 aa31.38■■■□□ 2.61
AGRN-202ENST00000419249 CHMP7Q8WUX9 453 aaPredicted RBP31.33■■■□□ 2.61
AGRN-202ENST00000419249 ERICH3Q5RHP9 1530 aa31.32■■■□□ 2.6
AGRN-202ENST00000419249 ADAMTS12P58397 1594 aa31.27■■■□□ 2.6
AGRN-202ENST00000419249 KIF27Q86VH2 1401 aa31.27■■■□□ 2.6
AGRN-202ENST00000419249 TRIM41Q8WV44 630 aa31.23■■■□□ 2.59
AGRN-202ENST00000419249 FHAD1B1AJZ9 1412 aa31.21■■■□□ 2.59
AGRN-202ENST00000419249 CLASP1Q7Z460 1538 aa31.19■■■□□ 2.58
AGRN-202ENST00000419249 RIMBP3CA6NJZ7 1639 aa31.18■■■□□ 2.58
AGRN-202ENST00000419249 RIMBP3BA6NNM3 1639 aa31.18■■■□□ 2.58
AGRN-202ENST00000419249 RIMBP3Q9UFD9 1639 aa31.18■■■□□ 2.58
AGRN-202ENST00000419249 GRIN2AQ12879 1464 aa31.16■■■□□ 2.58
AGRN-202ENST00000419249 ARHGEF11O15085 1522 aa31.15■■■□□ 2.58
AGRN-202ENST00000419249 IGF1RP08069 1367 aa31.15■■■□□ 2.58
AGRN-202ENST00000419249 NUP160Q12769 1436 aa31.04■■■□□ 2.56
AGRN-202ENST00000419249 CEP170Q5SW79 1584 aa31.02■■■□□ 2.56
AGRN-202ENST00000419249 CUL7Q14999 1698 aa31.01■■■□□ 2.55
AGRN-202ENST00000419249 CARMIL1Q5VZK9 1371 aa30.95■■■□□ 2.55
AGRN-202ENST00000419249 RUSC2Q8N2Y8 1516 aa30.93■■■□□ 2.54
AGRN-202ENST00000419249 CHIC1Q5VXU3 224 aa30.92■■■□□ 2.54
AGRN-202ENST00000419249 ARAP1Q96P48 1450 aa30.89■■■□□ 2.54
AGRN-202ENST00000419249 SHROOM2Q13796 1616 aa30.84■■■□□ 2.53
AGRN-202ENST00000419249 CYB5RLQ6IPT4 315 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms