RNA–Protein interactions for RNA: ENST00000419074.5

RCC1-206, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-206ENST00000419074 NISCHQ9Y2I1 1504 aa31.09■■■□□ 2.57
RCC1-206ENST00000419074 CCDC180Q9P1Z9 1646 aa27.24■■□□□ 1.95
RCC1-206ENST00000419074 ABCC9O60706 1549 aa26.34■■□□□ 1.81
RCC1-206ENST00000419074 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
RCC1-206ENST00000419074 DCAF8L2P0C7V8 631 aa25.95■■□□□ 1.74
RCC1-206ENST00000419074 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
RCC1-206ENST00000419074 MYO15BQ96JP2 1530 aa25.65■■□□□ 1.7
RCC1-206ENST00000419074 NACADO15069 1562 aa25.61■■□□□ 1.69
RCC1-206ENST00000419074 RB1CC1Q8TDY2 1594 aa25.49■■□□□ 1.67
RCC1-206ENST00000419074 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
RCC1-206ENST00000419074 SHROOM4Q9ULL8 1493 aa24.96■■□□□ 1.59
RCC1-206ENST00000419074 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
RCC1-206ENST00000419074 UNC13AQ9UPW8 1703 aa24.71■■□□□ 1.55
RCC1-206ENST00000419074 BICRAQ9NZM4 1560 aa24.68■■□□□ 1.54
RCC1-206ENST00000419074 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
RCC1-206ENST00000419074 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
RCC1-206ENST00000419074 EIF4G1Q04637 1599 aaKnown RBP24.01■■□□□ 1.43
RCC1-206ENST00000419074 MROH2BQ7Z745 1585 aa23.97■■□□□ 1.43
RCC1-206ENST00000419074 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.42
RCC1-206ENST00000419074 SMARCA4P51532 1647 aa23.93■■□□□ 1.42
RCC1-206ENST00000419074 SUPT5HO00267 1087 aaKnown RBP23.82■■□□□ 1.4
RCC1-206ENST00000419074 DNAJC5BQ9UF47 199 aa23.81■■□□□ 1.4
RCC1-206ENST00000419074 ATAD2BQ9ULI0 1458 aa23.78■■□□□ 1.4
RCC1-206ENST00000419074 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.4
RCC1-206ENST00000419074 SMARCA2P51531 1590 aa23.71■■□□□ 1.39
RCC1-206ENST00000419074 NCAPD3P42695 1498 aa23.71■■□□□ 1.39
RCC1-206ENST00000419074 PEG3Q9GZU2 1588 aa23.7■■□□□ 1.38
RCC1-206ENST00000419074 WIZO95785 1651 aa23.65■■□□□ 1.38
RCC1-206ENST00000419074 BAZ1BQ9UIG0 1483 aaKnown RBP23.59■■□□□ 1.37
RCC1-206ENST00000419074 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
RCC1-206ENST00000419074 TOP2AP11388 1531 aaKnown RBP23.48■■□□□ 1.35
RCC1-206ENST00000419074 CCDC88BA6NC98 1476 aa23.28■■□□□ 1.32
RCC1-206ENST00000419074 CADPSQ9ULU8 1353 aa23.08■■□□□ 1.29
RCC1-206ENST00000419074 CFTRP13569 1480 aa23■■□□□ 1.27
RCC1-206ENST00000419074 NESP48681 1621 aa22.93■■□□□ 1.26
RCC1-206ENST00000419074 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.26
RCC1-206ENST00000419074 PDS5BQ9NTI5 1447 aa22.84■■□□□ 1.25
RCC1-206ENST00000419074 FANCD2Q9BXW9 1451 aa22.75■■□□□ 1.23
RCC1-206ENST00000419074 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
RCC1-206ENST00000419074 CEP164Q9UPV0 1460 aa22.65■■□□□ 1.22
RCC1-206ENST00000419074 PRDM2Q13029 1718 aa22.57■■□□□ 1.2
RCC1-206ENST00000419074 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
RCC1-206ENST00000419074 CHIC1Q5VXU3 224 aa22.55■■□□□ 1.2
RCC1-206ENST00000419074 MRC2Q9UBG0 1479 aa22.52■■□□□ 1.2
RCC1-206ENST00000419074 KIF21AQ7Z4S6 1674 aa22.51■■□□□ 1.19
RCC1-206ENST00000419074 ABCC8Q09428 1581 aa22.5■■□□□ 1.19
RCC1-206ENST00000419074 TRIM41Q8WV44 630 aa22.49■■□□□ 1.19
RCC1-206ENST00000419074 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
RCC1-206ENST00000419074 CUX1P39880 1505 aa22.43■■□□□ 1.18
RCC1-206ENST00000419074 TOPBP1Q92547 1522 aa22.42■■□□□ 1.18
RCC1-206ENST00000419074 DNMBPQ6XZF7 1577 aa22.4■■□□□ 1.18
RCC1-206ENST00000419074 WDR62O43379 1518 aa22.37■■□□□ 1.17
RCC1-206ENST00000419074 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
RCC1-206ENST00000419074 THOC2Q8NI27 1593 aaKnown RBP22.35■■□□□ 1.17
RCC1-206ENST00000419074 TOP2BQ02880 1626 aa22.35■■□□□ 1.17
RCC1-206ENST00000419074 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
RCC1-206ENST00000419074 POLA1P09884 1462 aaPredicted RBP22.28■■□□□ 1.16
RCC1-206ENST00000419074 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
RCC1-206ENST00000419074 SOGA1O94964 1423 aa22.27■■□□□ 1.16
RCC1-206ENST00000419074 CUX2O14529 1486 aa22.22■■□□□ 1.15
RCC1-206ENST00000419074 RAD54L2Q9Y4B4 1467 aa22.21■■□□□ 1.15
RCC1-206ENST00000419074 IFT140Q96RY7 1462 aa22.19■■□□□ 1.14
RCC1-206ENST00000419074 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
RCC1-206ENST00000419074 TDRD9Q8NDG6 1382 aaKnown RBP22.1■■□□□ 1.13
RCC1-206ENST00000419074 TARBP1Q13395 1621 aaKnown RBP22.07■■□□□ 1.12
RCC1-206ENST00000419074 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
RCC1-206ENST00000419074 ZNF608Q9ULD9 1512 aaPredicted RBP22.03■■□□□ 1.12
RCC1-206ENST00000419074 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.126e-9■■■■■ 45.1
RCC1-206ENST00000419074 FAM9AQ8IZU1 332 aaPredicted RBP22.01■■□□□ 1.11
RCC1-206ENST00000419074 RUSC2Q8N2Y8 1516 aa21.99■■□□□ 1.11
RCC1-206ENST00000419074 EEA1Q15075 1411 aa21.98■■□□□ 1.11
RCC1-206ENST00000419074 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
RCC1-206ENST00000419074 CSRNP3Q8WYN3 585 aa21.97■■□□□ 1.11
RCC1-206ENST00000419074 IGF1RP08069 1367 aa21.95■■□□□ 1.1
RCC1-206ENST00000419074 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
RCC1-206ENST00000419074 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
RCC1-206ENST00000419074 ABCA5Q8WWZ7 1642 aa21.88■■□□□ 1.09
RCC1-206ENST00000419074 EIF4G3O43432 1585 aaKnown RBP21.85■■□□□ 1.09
RCC1-206ENST00000419074 ERICH3Q5RHP9 1530 aa21.83■■□□□ 1.09
RCC1-206ENST00000419074 CARMIL1Q5VZK9 1371 aa21.82■■□□□ 1.08
RCC1-206ENST00000419074 SNAPC4Q5SXM2 1469 aa21.77■■□□□ 1.08
RCC1-206ENST00000419074 FHAD1B1AJZ9 1412 aa21.77■■□□□ 1.08
RCC1-206ENST00000419074 MAGI1Q96QZ7 1491 aaPredicted RBP21.76■■□□□ 1.07
RCC1-206ENST00000419074 CHMP7Q8WUX9 453 aaPredicted RBP21.75■■□□□ 1.07
RCC1-206ENST00000419074 PRXQ9BXM0 1461 aa21.75■■□□□ 1.07
RCC1-206ENST00000419074 FBLN2P98095 1184 aa21.73■■□□□ 1.07
RCC1-206ENST00000419074 RAPGEF2Q9Y4G8 1499 aa21.7■■□□□ 1.06
RCC1-206ENST00000419074 PBRM1Q86U86 1689 aa21.69■■□□□ 1.06
RCC1-206ENST00000419074 SYNJ2O15056 1496 aa21.68■■□□□ 1.06
RCC1-206ENST00000419074 EHMT2Q96KQ7 1210 aa21.67■■□□□ 1.06
RCC1-206ENST00000419074 CUL7Q14999 1698 aa21.66■■□□□ 1.06
RCC1-206ENST00000419074 LOC105371045A0A1W2PR82 267 aa21.64■■□□□ 1.05
RCC1-206ENST00000419074 ADAMTS12P58397 1594 aa21.64■■□□□ 1.05
RCC1-206ENST00000419074 UBTFP17480 764 aaKnown RBP21.61■■□□□ 1.05
RCC1-206ENST00000419074 GOLGA3Q08378 1498 aa21.6■■□□□ 1.05
RCC1-206ENST00000419074 GRIN2AQ12879 1464 aa21.59■■□□□ 1.05
RCC1-206ENST00000419074 KIF21BO75037 1637 aa21.58■■□□□ 1.05
RCC1-206ENST00000419074 OSCARQ8IYS5 282 aa21.54■■□□□ 1.04
RCC1-206ENST00000419074 NUP160Q12769 1436 aa21.5■■□□□ 1.03
RCC1-206ENST00000419074 TNIKQ9UKE5 1360 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms