RNA–Protein interactions for RNA: ENST00000418988.2

PSMA1-202, Transcript of proteasome subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PSMA1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-202ENST00000418988 NISCHQ9Y2I1 1504 aa34.35■■■■□ 3.09
PSMA1-202ENST00000418988 ABCC9O60706 1549 aa31.08■■■□□ 2.57
PSMA1-202ENST00000418988 CCDC180Q9P1Z9 1646 aa30.76■■■□□ 2.52
PSMA1-202ENST00000418988 DNAJC5BQ9UF47 199 aa29.44■■■□□ 2.3
PSMA1-202ENST00000418988 RB1CC1Q8TDY2 1594 aa29.36■■■□□ 2.29
PSMA1-202ENST00000418988 NACADO15069 1562 aa29.06■■■□□ 2.24
PSMA1-202ENST00000418988 DCAF8L2P0C7V8 631 aa29.05■■■□□ 2.24
PSMA1-202ENST00000418988 PABPN1Q86U42 306 aaKnown RBP eCLIP28.93■■■□□ 2.22
PSMA1-202ENST00000418988 UNC13AQ9UPW8 1703 aa28.8■■■□□ 2.2
PSMA1-202ENST00000418988 MYO15BQ96JP2 1530 aa28.74■■■□□ 2.19
PSMA1-202ENST00000418988 ZCCHC6Q5VYS8 1495 aaKnown RBP28.67■■■□□ 2.18
PSMA1-202ENST00000418988 DCAF1Q9Y4B6 1507 aa28.56■■■□□ 2.16
PSMA1-202ENST00000418988 BICRAQ9NZM4 1560 aa28.55■■■□□ 2.16
PSMA1-202ENST00000418988 SCRIBQ14160 1630 aa28.04■■■□□ 2.08
PSMA1-202ENST00000418988 CC2D2AQ9P2K1 1620 aa28.03■■■□□ 2.08
PSMA1-202ENST00000418988 CECR2Q9BXF3 1484 aa27.98■■■□□ 2.07
PSMA1-202ENST00000418988 SHROOM4Q9ULL8 1493 aa27.98■■■□□ 2.07
PSMA1-202ENST00000418988 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
PSMA1-202ENST00000418988 DNAJC5Q9H3Z4 198 aa27.18■■□□□ 1.94
PSMA1-202ENST00000418988 NCAPD3P42695 1498 aa26.83■■□□□ 1.89
PSMA1-202ENST00000418988 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
PSMA1-202ENST00000418988 CUX2O14529 1486 aa26.79■■□□□ 1.88
PSMA1-202ENST00000418988 ATAD2BQ9ULI0 1458 aa26.75■■□□□ 1.87
PSMA1-202ENST00000418988 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
PSMA1-202ENST00000418988 BAZ1AQ9NRL2 1556 aaPredicted RBP26.7■■□□□ 1.86
PSMA1-202ENST00000418988 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
PSMA1-202ENST00000418988 NESP48681 1621 aa26.62■■□□□ 1.85
PSMA1-202ENST00000418988 HMGXB3Q12766 1538 aa26.6■■□□□ 1.85
PSMA1-202ENST00000418988 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
PSMA1-202ENST00000418988 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
PSMA1-202ENST00000418988 MROH2BQ7Z745 1585 aa26.41■■□□□ 1.82
PSMA1-202ENST00000418988 THOC2Q8NI27 1593 aaKnown RBP26.35■■□□□ 1.81
PSMA1-202ENST00000418988 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
PSMA1-202ENST00000418988 KIF21AQ7Z4S6 1674 aa26.27■■□□□ 1.8
PSMA1-202ENST00000418988 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
PSMA1-202ENST00000418988 WIZO95785 1651 aa26.13■■□□□ 1.77
PSMA1-202ENST00000418988 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
PSMA1-202ENST00000418988 CADPSQ9ULU8 1353 aa26.04■■□□□ 1.76
PSMA1-202ENST00000418988 TRIM41Q8WV44 630 aa25.97■■□□□ 1.75
PSMA1-202ENST00000418988 MRC2Q9UBG0 1479 aa25.96■■□□□ 1.75
PSMA1-202ENST00000418988 TOP2AP11388 1531 aaKnown RBP25.95■■□□□ 1.74
PSMA1-202ENST00000418988 WDR62O43379 1518 aa25.88■■□□□ 1.73
PSMA1-202ENST00000418988 CEP164Q9UPV0 1460 aa25.8■■□□□ 1.72
PSMA1-202ENST00000418988 FANCD2Q9BXW9 1451 aa25.76■■□□□ 1.71
PSMA1-202ENST00000418988 CFTRP13569 1480 aa25.66■■□□□ 1.7
PSMA1-202ENST00000418988 OSCARQ8IYS5 282 aa25.59■■□□□ 1.69
PSMA1-202ENST00000418988 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
PSMA1-202ENST00000418988 PRDM2Q13029 1718 aa25.57■■□□□ 1.68
PSMA1-202ENST00000418988 CCDC88BA6NC98 1476 aa25.51■■□□□ 1.67
PSMA1-202ENST00000418988 ZNF608Q9ULD9 1512 aaPredicted RBP25.34■■□□□ 1.65
PSMA1-202ENST00000418988 RIMBP3CA6NJZ7 1639 aa25.31■■□□□ 1.64
PSMA1-202ENST00000418988 RIMBP3BA6NNM3 1639 aa25.31■■□□□ 1.64
PSMA1-202ENST00000418988 RIMBP3Q9UFD9 1639 aa25.31■■□□□ 1.64
PSMA1-202ENST00000418988 IFT140Q96RY7 1462 aa25.28■■□□□ 1.64
PSMA1-202ENST00000418988 TOPBP1Q92547 1522 aa25.24■■□□□ 1.63
PSMA1-202ENST00000418988 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
PSMA1-202ENST00000418988 EIF4G3O43432 1585 aaKnown RBP25.16■■□□□ 1.62
PSMA1-202ENST00000418988 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
PSMA1-202ENST00000418988 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
PSMA1-202ENST00000418988 SUPT5HO00267 1087 aaKnown RBP25.09■■□□□ 1.61
PSMA1-202ENST00000418988 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.618e-8■■■■□ 20
PSMA1-202ENST00000418988 CHD1O14646 1710 aa25.08■■□□□ 1.61
PSMA1-202ENST00000418988 CYB5RLQ6IPT4 315 aa25.07■■□□□ 1.6
PSMA1-202ENST00000418988 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
PSMA1-202ENST00000418988 FBLN2P98095 1184 aa25.03■■□□□ 1.6
PSMA1-202ENST00000418988 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
PSMA1-202ENST00000418988 RAD54L2Q9Y4B4 1467 aa24.93■■□□□ 1.58
PSMA1-202ENST00000418988 ARAP1Q96P48 1450 aa24.91■■□□□ 1.58
PSMA1-202ENST00000418988 TRHP20396 242 aaPredicted RBP24.91■■□□□ 1.58
PSMA1-202ENST00000418988 TDRD9Q8NDG6 1382 aaKnown RBP24.89■■□□□ 1.57
PSMA1-202ENST00000418988 SOGA1O94964 1423 aa24.86■■□□□ 1.57
PSMA1-202ENST00000418988 CUX1P39880 1505 aa24.81■■□□□ 1.56
PSMA1-202ENST00000418988 SNAPC4Q5SXM2 1469 aa24.79■■□□□ 1.56
PSMA1-202ENST00000418988 WDR97A6NE52 1622 aa24.79■■□□□ 1.56
PSMA1-202ENST00000418988 FGD5Q6ZNL6 1462 aa24.78■■□□□ 1.56
PSMA1-202ENST00000418988 CHMP7Q8WUX9 453 aaPredicted RBP24.73■■□□□ 1.55
PSMA1-202ENST00000418988 CLASP1Q7Z460 1538 aa24.71■■□□□ 1.55
PSMA1-202ENST00000418988 BIVM-ERCC5R4GMW8 1640 aa24.69■■□□□ 1.54
PSMA1-202ENST00000418988 SYNJ1O43426 1573 aa24.67■■□□□ 1.54
PSMA1-202ENST00000418988 MAGI1Q96QZ7 1491 aaPredicted RBP24.65■■□□□ 1.54
PSMA1-202ENST00000418988 TOP2BQ02880 1626 aa24.65■■□□□ 1.54
PSMA1-202ENST00000418988 GRIN2BQ13224 1484 aa24.64■■□□□ 1.54
PSMA1-202ENST00000418988 WRNQ14191 1432 aaPredicted RBP eCLIP24.61■■□□□ 1.53
PSMA1-202ENST00000418988 SYNJ2O15056 1496 aa24.59■■□□□ 1.53
PSMA1-202ENST00000418988 PBRM1Q86U86 1689 aa24.59■■□□□ 1.53
PSMA1-202ENST00000418988 ABCA10Q8WWZ4 1543 aa24.55■■□□□ 1.52
PSMA1-202ENST00000418988 GAPVD1Q14C86 1478 aa24.54■■□□□ 1.52
PSMA1-202ENST00000418988 ABCA5Q8WWZ7 1642 aa24.52■■□□□ 1.52
PSMA1-202ENST00000418988 ERCC6L2Q5T890 1561 aa24.38■■□□□ 1.49
PSMA1-202ENST00000418988 AEBP2Q6ZN18 517 aaPredicted RBP24.38■■□□□ 1.49
PSMA1-202ENST00000418988 GRIN2AQ12879 1464 aa24.33■■□□□ 1.49
PSMA1-202ENST00000418988 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
PSMA1-202ENST00000418988 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
PSMA1-202ENST00000418988 CEP170Q5SW79 1584 aa24.29■■□□□ 1.48
PSMA1-202ENST00000418988 NUP160Q12769 1436 aa24.24■■□□□ 1.47
PSMA1-202ENST00000418988 FHAD1B1AJZ9 1412 aa24.19■■□□□ 1.46
PSMA1-202ENST00000418988 SHROOM2Q13796 1616 aa24.18■■□□□ 1.46
PSMA1-202ENST00000418988 KIF27Q86VH2 1401 aa24.1■■□□□ 1.45
PSMA1-202ENST00000418988 CUL7Q14999 1698 aa24.1■■□□□ 1.45
PSMA1-202ENST00000418988 KIF13AQ9H1H9 1805 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms