RNA–Protein interactions for RNA: ENST00000418976.1

SWI5-203, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SWI5, Length 763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-203ENST00000418976 NISCHQ9Y2I1 1504 aa25.21■■□□□ 1.63
SWI5-203ENST00000418976 CCDC180Q9P1Z9 1646 aa22.1■■□□□ 1.13
SWI5-203ENST00000418976 ABCC9O60706 1549 aa21.75■■□□□ 1.07
SWI5-203ENST00000418976 ZCCHC6Q5VYS8 1495 aaKnown RBP21.2■□□□□ 0.98
SWI5-203ENST00000418976 DCAF1Q9Y4B6 1507 aa20.88■□□□□ 0.93
SWI5-203ENST00000418976 MYO15BQ96JP2 1530 aa20.74■□□□□ 0.91
SWI5-203ENST00000418976 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
SWI5-203ENST00000418976 NACADO15069 1562 aa20.64■□□□□ 0.9
SWI5-203ENST00000418976 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
SWI5-203ENST00000418976 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
SWI5-203ENST00000418976 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
SWI5-203ENST00000418976 SCRIBQ14160 1630 aa20.26■□□□□ 0.83
SWI5-203ENST00000418976 PABPN1Q86U42 306 aaKnown RBP eCLIP20.25■□□□□ 0.83
SWI5-203ENST00000418976 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
SWI5-203ENST00000418976 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.81
SWI5-203ENST00000418976 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
SWI5-203ENST00000418976 CECR2Q9BXF3 1484 aa19.61■□□□□ 0.73
SWI5-203ENST00000418976 EIF4G1Q04637 1599 aaKnown RBP19.6■□□□□ 0.73
SWI5-203ENST00000418976 SUPT5HO00267 1087 aaKnown RBP19.57■□□□□ 0.72
SWI5-203ENST00000418976 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
SWI5-203ENST00000418976 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
SWI5-203ENST00000418976 MROH2BQ7Z745 1585 aa19.47■□□□□ 0.71
SWI5-203ENST00000418976 SMARCA4P51532 1647 aa19.43■□□□□ 0.7
SWI5-203ENST00000418976 WIZO95785 1651 aa19.33■□□□□ 0.68
SWI5-203ENST00000418976 PEG3Q9GZU2 1588 aa19.2■□□□□ 0.66
SWI5-203ENST00000418976 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
SWI5-203ENST00000418976 SMARCA2P51531 1590 aa19.13■□□□□ 0.65
SWI5-203ENST00000418976 ATAD2BQ9ULI0 1458 aa19.1■□□□□ 0.65
SWI5-203ENST00000418976 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
SWI5-203ENST00000418976 HMGXB3Q12766 1538 aa19■□□□□ 0.63
SWI5-203ENST00000418976 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
SWI5-203ENST00000418976 CCDC88BA6NC98 1476 aa18.89■□□□□ 0.61
SWI5-203ENST00000418976 DNAJC5Q9H3Z4 198 aa18.85■□□□□ 0.61
SWI5-203ENST00000418976 CUX2O14529 1486 aa18.8■□□□□ 0.6
SWI5-203ENST00000418976 ERCC6Q03468 1493 aa18.77■□□□□ 0.6
SWI5-203ENST00000418976 CHIC1Q5VXU3 224 aa18.74■□□□□ 0.59
SWI5-203ENST00000418976 NESP48681 1621 aa18.67■□□□□ 0.58
SWI5-203ENST00000418976 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
SWI5-203ENST00000418976 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
SWI5-203ENST00000418976 CADPSQ9ULU8 1353 aa18.5■□□□□ 0.55
SWI5-203ENST00000418976 CFTRP13569 1480 aa18.5■□□□□ 0.55
SWI5-203ENST00000418976 ABCC8Q09428 1581 aa18.5■□□□□ 0.55
SWI5-203ENST00000418976 THOC2Q8NI27 1593 aaKnown RBP18.48■□□□□ 0.55
SWI5-203ENST00000418976 PDS5BQ9NTI5 1447 aa18.47■□□□□ 0.55
SWI5-203ENST00000418976 TRIM41Q8WV44 630 aa18.42■□□□□ 0.54
SWI5-203ENST00000418976 WRNQ14191 1432 aaPredicted RBP eCLIP18.36■□□□□ 0.535e-6■■■■■ 29.2
SWI5-203ENST00000418976 KIF21AQ7Z4S6 1674 aa18.35■□□□□ 0.53
SWI5-203ENST00000418976 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
SWI5-203ENST00000418976 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
SWI5-203ENST00000418976 BIVM-ERCC5R4GMW8 1640 aa18.3■□□□□ 0.52
SWI5-203ENST00000418976 TOP2BQ02880 1626 aa18.28■□□□□ 0.52
SWI5-203ENST00000418976 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
SWI5-203ENST00000418976 WDR62O43379 1518 aa18.25■□□□□ 0.51
SWI5-203ENST00000418976 CUX1P39880 1505 aa18.23■□□□□ 0.51
SWI5-203ENST00000418976 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
SWI5-203ENST00000418976 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
SWI5-203ENST00000418976 SOGA1O94964 1423 aa18.09■□□□□ 0.49
SWI5-203ENST00000418976 EEA1Q15075 1411 aa18.09■□□□□ 0.49
SWI5-203ENST00000418976 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
SWI5-203ENST00000418976 URB2Q14146 1524 aaKnown RBP18.04■□□□□ 0.48
SWI5-203ENST00000418976 TOPBP1Q92547 1522 aa18.04■□□□□ 0.48
SWI5-203ENST00000418976 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
SWI5-203ENST00000418976 FGD5Q6ZNL6 1462 aa18.02■□□□□ 0.48
SWI5-203ENST00000418976 LOC105371045A0A1W2PR82 267 aa17.97■□□□□ 0.47
SWI5-203ENST00000418976 POLA1P09884 1462 aaPredicted RBP17.95■□□□□ 0.46
SWI5-203ENST00000418976 OSCARQ8IYS5 282 aa17.94■□□□□ 0.46
SWI5-203ENST00000418976 KIF21BO75037 1637 aa17.91■□□□□ 0.46
SWI5-203ENST00000418976 WDR97A6NE52 1622 aa17.9■□□□□ 0.46
SWI5-203ENST00000418976 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
SWI5-203ENST00000418976 KIF27Q86VH2 1401 aa17.89■□□□□ 0.45
SWI5-203ENST00000418976 ABCA10Q8WWZ4 1543 aa17.88■□□□□ 0.45
SWI5-203ENST00000418976 IFT140Q96RY7 1462 aa17.87■□□□□ 0.45
SWI5-203ENST00000418976 GOLGA3Q08378 1498 aa17.85■□□□□ 0.45
SWI5-203ENST00000418976 RAD54L2Q9Y4B4 1467 aa17.85■□□□□ 0.45
SWI5-203ENST00000418976 ZNF608Q9ULD9 1512 aaPredicted RBP17.82■□□□□ 0.44
SWI5-203ENST00000418976 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
SWI5-203ENST00000418976 ERICH3Q5RHP9 1530 aa17.79■□□□□ 0.44
SWI5-203ENST00000418976 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
SWI5-203ENST00000418976 ABCA5Q8WWZ7 1642 aa17.79■□□□□ 0.44
SWI5-203ENST00000418976 PRXQ9BXM0 1461 aa17.78■□□□□ 0.44
SWI5-203ENST00000418976 RAPGEF2Q9Y4G8 1499 aa17.75■□□□□ 0.43
SWI5-203ENST00000418976 TNIKQ9UKE5 1360 aa17.74■□□□□ 0.43
SWI5-203ENST00000418976 CUL7Q14999 1698 aa17.71■□□□□ 0.42
SWI5-203ENST00000418976 IGF1RP08069 1367 aa17.7■□□□□ 0.42
SWI5-203ENST00000418976 EIF4G3O43432 1585 aaKnown RBP17.68■□□□□ 0.42
SWI5-203ENST00000418976 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
SWI5-203ENST00000418976 CEP162Q5TB80 1403 aa17.66■□□□□ 0.42
SWI5-203ENST00000418976 GAPVD1Q14C86 1478 aa17.66■□□□□ 0.42
SWI5-203ENST00000418976 AQRO60306 1485 aaKnown RBP eCLIP17.65■□□□□ 0.423e-7■■■□□ 17
SWI5-203ENST00000418976 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
SWI5-203ENST00000418976 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.41
SWI5-203ENST00000418976 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.41
SWI5-203ENST00000418976 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.41
SWI5-203ENST00000418976 UBTFP17480 764 aaKnown RBP17.63■□□□□ 0.41
SWI5-203ENST00000418976 CARMIL1Q5VZK9 1371 aa17.62■□□□□ 0.41
SWI5-203ENST00000418976 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
SWI5-203ENST00000418976 GRIN2BQ13224 1484 aa17.6■□□□□ 0.41
SWI5-203ENST00000418976 ADAMTS12P58397 1594 aa17.56■□□□□ 0.4
SWI5-203ENST00000418976 FBLN2P98095 1184 aa17.53■□□□□ 0.4
SWI5-203ENST00000418976 CLIP1P30622 1438 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms