RNA–Protein interactions for RNA: ENST00000418772.1

SEC61A2-207, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 5

Gene SEC61A2, Length 434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-207ENST00000418772 NISCHQ9Y2I1 1504 aa18.72■□□□□ 0.59
SEC61A2-207ENST00000418772 ABCC9O60706 1549 aa17.34■□□□□ 0.37
SEC61A2-207ENST00000418772 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
SEC61A2-207ENST00000418772 DNAJC5BQ9UF47 199 aa16.58■□□□□ 0.24
SEC61A2-207ENST00000418772 DCAF8L2P0C7V8 631 aa16.28■□□□□ 0.2
SEC61A2-207ENST00000418772 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
SEC61A2-207ENST00000418772 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
SEC61A2-207ENST00000418772 NACADO15069 1562 aa16.04■□□□□ 0.16
SEC61A2-207ENST00000418772 UNC13AQ9UPW8 1703 aa16■□□□□ 0.15
SEC61A2-207ENST00000418772 BICRAQ9NZM4 1560 aa15.79■□□□□ 0.12
SEC61A2-207ENST00000418772 CC2D2AQ9P2K1 1620 aa15.6■□□□□ 0.09
SEC61A2-207ENST00000418772 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
SEC61A2-207ENST00000418772 MYO15BQ96JP2 1530 aa15.59■□□□□ 0.09
SEC61A2-207ENST00000418772 SCRIBQ14160 1630 aa15.5■□□□□ 0.07
SEC61A2-207ENST00000418772 EIF4G1Q04637 1599 aaKnown RBP15.44■□□□□ 0.06
SEC61A2-207ENST00000418772 ZCCHC6Q5VYS8 1495 aaKnown RBP15.4■□□□□ 0.06
SEC61A2-207ENST00000418772 DNAJC5Q9H3Z4 198 aa15.39■□□□□ 0.05
SEC61A2-207ENST00000418772 SHROOM4Q9ULL8 1493 aa15.35■□□□□ 0.05
SEC61A2-207ENST00000418772 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.04
SEC61A2-207ENST00000418772 ERCC6Q03468 1493 aa14.97□□□□□ -0.01
SEC61A2-207ENST00000418772 CUX2O14529 1486 aa14.92□□□□□ -0.02
SEC61A2-207ENST00000418772 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
SEC61A2-207ENST00000418772 NESP48681 1621 aa14.81□□□□□ -0.04
SEC61A2-207ENST00000418772 ATAD2BQ9ULI0 1458 aa14.76□□□□□ -0.05
SEC61A2-207ENST00000418772 TRIM41Q8WV44 630 aa14.75□□□□□ -0.05
SEC61A2-207ENST00000418772 SMARCA4P51532 1647 aa14.68□□□□□ -0.06
SEC61A2-207ENST00000418772 SMARCA2P51531 1590 aa14.68□□□□□ -0.06
SEC61A2-207ENST00000418772 HMGXB3Q12766 1538 aa14.63□□□□□ -0.07
SEC61A2-207ENST00000418772 BAZ1BQ9UIG0 1483 aaKnown RBP14.63□□□□□ -0.07
SEC61A2-207ENST00000418772 KIF21AQ7Z4S6 1674 aa14.6□□□□□ -0.07
SEC61A2-207ENST00000418772 THOC2Q8NI27 1593 aaKnown RBP14.6□□□□□ -0.07
SEC61A2-207ENST00000418772 LAMC3Q9Y6N6 1575 aa14.54□□□□□ -0.08
SEC61A2-207ENST00000418772 BAZ1AQ9NRL2 1556 aaPredicted RBP14.53□□□□□ -0.08
SEC61A2-207ENST00000418772 PDS5BQ9NTI5 1447 aa14.5□□□□□ -0.09
SEC61A2-207ENST00000418772 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
SEC61A2-207ENST00000418772 PEG3Q9GZU2 1588 aa14.43□□□□□ -0.1
SEC61A2-207ENST00000418772 CADPSQ9ULU8 1353 aa14.4□□□□□ -0.1
SEC61A2-207ENST00000418772 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
SEC61A2-207ENST00000418772 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
SEC61A2-207ENST00000418772 WIZO95785 1651 aa14.35□□□□□ -0.11
SEC61A2-207ENST00000418772 WDR62O43379 1518 aa14.31□□□□□ -0.12
SEC61A2-207ENST00000418772 CEP164Q9UPV0 1460 aa14.28□□□□□ -0.12
SEC61A2-207ENST00000418772 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
SEC61A2-207ENST00000418772 URB2Q14146 1524 aaKnown RBP14.15□□□□□ -0.14
SEC61A2-207ENST00000418772 RIMBP3CA6NJZ7 1639 aa14.14□□□□□ -0.15
SEC61A2-207ENST00000418772 RIMBP3BA6NNM3 1639 aa14.14□□□□□ -0.15
SEC61A2-207ENST00000418772 RIMBP3Q9UFD9 1639 aa14.14□□□□□ -0.15
SEC61A2-207ENST00000418772 CFTRP13569 1480 aa14.13□□□□□ -0.15
SEC61A2-207ENST00000418772 CYB5RLQ6IPT4 315 aa14.12□□□□□ -0.15
SEC61A2-207ENST00000418772 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
SEC61A2-207ENST00000418772 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
SEC61A2-207ENST00000418772 RSF1Q96T23 1441 aaPredicted RBP14.05□□□□□ -0.16
SEC61A2-207ENST00000418772 FBLN2P98095 1184 aa14.04□□□□□ -0.16
SEC61A2-207ENST00000418772 ARHGEF11O15085 1522 aa14.03□□□□□ -0.16
SEC61A2-207ENST00000418772 PRDM2Q13029 1718 aa14.02□□□□□ -0.16
SEC61A2-207ENST00000418772 TOP2AP11388 1531 aaKnown RBP14.01□□□□□ -0.17
SEC61A2-207ENST00000418772 IFT140Q96RY7 1462 aa13.98□□□□□ -0.17
SEC61A2-207ENST00000418772 CHD1O14646 1710 aa13.95□□□□□ -0.18
SEC61A2-207ENST00000418772 TOPBP1Q92547 1522 aa13.95□□□□□ -0.18
SEC61A2-207ENST00000418772 CCDC88BA6NC98 1476 aa13.94□□□□□ -0.18
SEC61A2-207ENST00000418772 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.18
SEC61A2-207ENST00000418772 AEBP2Q6ZN18 517 aaPredicted RBP13.91□□□□□ -0.18
SEC61A2-207ENST00000418772 EIF4G3O43432 1585 aaKnown RBP13.91□□□□□ -0.18
SEC61A2-207ENST00000418772 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
SEC61A2-207ENST00000418772 ABCC8Q09428 1581 aa13.85□□□□□ -0.19
SEC61A2-207ENST00000418772 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.2
SEC61A2-207ENST00000418772 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
SEC61A2-207ENST00000418772 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
SEC61A2-207ENST00000418772 RAD54L2Q9Y4B4 1467 aa13.81□□□□□ -0.2
SEC61A2-207ENST00000418772 CHMP7Q8WUX9 453 aaPredicted RBP13.8□□□□□ -0.2
SEC61A2-207ENST00000418772 SOGA1O94964 1423 aa13.77□□□□□ -0.21
SEC61A2-207ENST00000418772 POLA1P09884 1462 aaPredicted RBP13.77□□□□□ -0.21
SEC61A2-207ENST00000418772 SNAPC4Q5SXM2 1469 aa13.72□□□□□ -0.21
SEC61A2-207ENST00000418772 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
SEC61A2-207ENST00000418772 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
SEC61A2-207ENST00000418772 CLASP1Q7Z460 1538 aa13.65□□□□□ -0.22
SEC61A2-207ENST00000418772 GRIN2BQ13224 1484 aa13.61□□□□□ -0.23
SEC61A2-207ENST00000418772 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
SEC61A2-207ENST00000418772 MAGI1Q96QZ7 1491 aaPredicted RBP13.61□□□□□ -0.23
SEC61A2-207ENST00000418772 PBRM1Q86U86 1689 aa13.59□□□□□ -0.23
SEC61A2-207ENST00000418772 CUX1P39880 1505 aa13.59□□□□□ -0.23
SEC61A2-207ENST00000418772 SYNJ2O15056 1496 aa13.59□□□□□ -0.23
SEC61A2-207ENST00000418772 WDR97A6NE52 1622 aa13.54□□□□□ -0.24
SEC61A2-207ENST00000418772 ERCC6L2Q5T890 1561 aa13.54□□□□□ -0.24
SEC61A2-207ENST00000418772 SUPT5HO00267 1087 aaKnown RBP13.46□□□□□ -0.25
SEC61A2-207ENST00000418772 KIF13AQ9H1H9 1805 aa13.45□□□□□ -0.26
SEC61A2-207ENST00000418772 GRIN2AQ12879 1464 aa13.44□□□□□ -0.26
SEC61A2-207ENST00000418772 CEP170Q5SW79 1584 aa13.44□□□□□ -0.26
SEC61A2-207ENST00000418772 ABCA5Q8WWZ7 1642 aa13.43□□□□□ -0.26
SEC61A2-207ENST00000418772 ABCA10Q8WWZ4 1543 aa13.43□□□□□ -0.26
SEC61A2-207ENST00000418772 FAM69CQ0P6D2 419 aa13.41□□□□□ -0.26
SEC61A2-207ENST00000418772 NPM1P06748 294 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEC61A2-207ENST00000418772 JPH4Q96JJ6 628 aa13.39□□□□□ -0.27
SEC61A2-207ENST00000418772 TSPOAP1O95153 1857 aa13.38□□□□□ -0.27
SEC61A2-207ENST00000418772 WRNQ14191 1432 aaPredicted RBP eCLIP13.38□□□□□ -0.27
SEC61A2-207ENST00000418772 PRG4Q92954 1404 aaPredicted RBP13.37□□□□□ -0.27
SEC61A2-207ENST00000418772 NUP160Q12769 1436 aa13.36□□□□□ -0.27
SEC61A2-207ENST00000418772 ADAMTS12P58397 1594 aa13.36□□□□□ -0.27
SEC61A2-207ENST00000418772 FHAD1B1AJZ9 1412 aa13.34□□□□□ -0.27
SEC61A2-207ENST00000418772 SHROOM2Q13796 1616 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms