RNA–Protein interactions for RNA: ENST00000418654.1

AGAP1-206, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

TSL 3

Gene AGAP1, Length 826 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-206ENST00000418654 NISCHQ9Y2I1 1504 aa23.58■■□□□ 1.36
AGAP1-206ENST00000418654 ABCC9O60706 1549 aa21.87■■□□□ 1.09
AGAP1-206ENST00000418654 CCDC180Q9P1Z9 1646 aa21.3■■□□□ 1
AGAP1-206ENST00000418654 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
AGAP1-206ENST00000418654 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
AGAP1-206ENST00000418654 PABPN1Q86U42 306 aaKnown RBP eCLIP20.33■□□□□ 0.85
AGAP1-206ENST00000418654 NACADO15069 1562 aa20.28■□□□□ 0.84
AGAP1-206ENST00000418654 UNC13AQ9UPW8 1703 aa20.17■□□□□ 0.82
AGAP1-206ENST00000418654 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
AGAP1-206ENST00000418654 DCAF8L2P0C7V8 631 aa20.08■□□□□ 0.81
AGAP1-206ENST00000418654 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
AGAP1-206ENST00000418654 CECR2Q9BXF3 1484 aa19.73■□□□□ 0.75
AGAP1-206ENST00000418654 CC2D2AQ9P2K1 1620 aa19.73■□□□□ 0.75
AGAP1-206ENST00000418654 DNAJC5Q9H3Z4 198 aa19.69■□□□□ 0.74
AGAP1-206ENST00000418654 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
AGAP1-206ENST00000418654 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
AGAP1-206ENST00000418654 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
AGAP1-206ENST00000418654 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
AGAP1-206ENST00000418654 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
AGAP1-206ENST00000418654 CUX2O14529 1486 aa19■□□□□ 0.63
AGAP1-206ENST00000418654 ERCC6Q03468 1493 aa18.81■□□□□ 0.6
AGAP1-206ENST00000418654 NCAPD3P42695 1498 aa18.79■□□□□ 0.6
AGAP1-206ENST00000418654 NESP48681 1621 aa18.7■□□□□ 0.58
AGAP1-206ENST00000418654 ATAD2BQ9ULI0 1458 aa18.66■□□□□ 0.58
AGAP1-206ENST00000418654 THOC2Q8NI27 1593 aaKnown RBP18.55■□□□□ 0.56
AGAP1-206ENST00000418654 HMGXB3Q12766 1538 aa18.54■□□□□ 0.56
AGAP1-206ENST00000418654 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
AGAP1-206ENST00000418654 SMARCA2P51531 1590 aa18.49■□□□□ 0.55
AGAP1-206ENST00000418654 SMARCA4P51532 1647 aa18.48■□□□□ 0.55
AGAP1-206ENST00000418654 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
AGAP1-206ENST00000418654 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
AGAP1-206ENST00000418654 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
AGAP1-206ENST00000418654 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.52
AGAP1-206ENST00000418654 BAZ1AQ9NRL2 1556 aaPredicted RBP18.27■□□□□ 0.52
AGAP1-206ENST00000418654 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.52
AGAP1-206ENST00000418654 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
AGAP1-206ENST00000418654 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
AGAP1-206ENST00000418654 MRC2Q9UBG0 1479 aa18.17■□□□□ 0.5
AGAP1-206ENST00000418654 WDR62O43379 1518 aa18.17■□□□□ 0.5
AGAP1-206ENST00000418654 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
AGAP1-206ENST00000418654 AEBP2Q6ZN18 517 aaPredicted RBP18.04■□□□□ 0.48
AGAP1-206ENST00000418654 CEP164Q9UPV0 1460 aa17.96■□□□□ 0.47
AGAP1-206ENST00000418654 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
AGAP1-206ENST00000418654 WIZO95785 1651 aa17.94■□□□□ 0.46
AGAP1-206ENST00000418654 RIMBP3CA6NJZ7 1639 aa17.92■□□□□ 0.46
AGAP1-206ENST00000418654 RIMBP3BA6NNM3 1639 aa17.92■□□□□ 0.46
AGAP1-206ENST00000418654 RIMBP3Q9UFD9 1639 aa17.92■□□□□ 0.46
AGAP1-206ENST00000418654 URB2Q14146 1524 aaKnown RBP17.89■□□□□ 0.45
AGAP1-206ENST00000418654 CFTRP13569 1480 aa17.88■□□□□ 0.45
AGAP1-206ENST00000418654 CHIC1Q5VXU3 224 aa17.82■□□□□ 0.44
AGAP1-206ENST00000418654 ARHGEF11O15085 1522 aa17.8■□□□□ 0.44
AGAP1-206ENST00000418654 ZNF608Q9ULD9 1512 aaPredicted RBP17.77■□□□□ 0.43
AGAP1-206ENST00000418654 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
AGAP1-206ENST00000418654 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
AGAP1-206ENST00000418654 RSF1Q96T23 1441 aaPredicted RBP17.64■□□□□ 0.41
AGAP1-206ENST00000418654 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
AGAP1-206ENST00000418654 ARAP1Q96P48 1450 aa17.62■□□□□ 0.41
AGAP1-206ENST00000418654 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
AGAP1-206ENST00000418654 PRDM2Q13029 1718 aa17.57■□□□□ 0.4
AGAP1-206ENST00000418654 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
AGAP1-206ENST00000418654 EIF4G3O43432 1585 aaKnown RBP17.56■□□□□ 0.4
AGAP1-206ENST00000418654 CHD1O14646 1710 aa17.54■□□□□ 0.4
AGAP1-206ENST00000418654 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.4
AGAP1-206ENST00000418654 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
AGAP1-206ENST00000418654 TARBP1Q13395 1621 aaKnown RBP17.48■□□□□ 0.39
AGAP1-206ENST00000418654 FBLN2P98095 1184 aa17.43■□□□□ 0.38
AGAP1-206ENST00000418654 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
AGAP1-206ENST00000418654 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
AGAP1-206ENST00000418654 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
AGAP1-206ENST00000418654 CLASP1Q7Z460 1538 aa17.36■□□□□ 0.37
AGAP1-206ENST00000418654 RAD54L2Q9Y4B4 1467 aa17.35■□□□□ 0.37
AGAP1-206ENST00000418654 TDRD9Q8NDG6 1382 aaKnown RBP17.33■□□□□ 0.36
AGAP1-206ENST00000418654 SNAPC4Q5SXM2 1469 aa17.27■□□□□ 0.36
AGAP1-206ENST00000418654 SOGA1O94964 1423 aa17.26■□□□□ 0.35
AGAP1-206ENST00000418654 CHMP7Q8WUX9 453 aaPredicted RBP17.22■□□□□ 0.35
AGAP1-206ENST00000418654 SYNJ1O43426 1573 aa17.2■□□□□ 0.34
AGAP1-206ENST00000418654 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
AGAP1-206ENST00000418654 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
AGAP1-206ENST00000418654 FGD5Q6ZNL6 1462 aa17.17■□□□□ 0.34
AGAP1-206ENST00000418654 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
AGAP1-206ENST00000418654 WDR97A6NE52 1622 aa17.14■□□□□ 0.33
AGAP1-206ENST00000418654 GRIN2BQ13224 1484 aa17.13■□□□□ 0.33
AGAP1-206ENST00000418654 ERCC6L2Q5T890 1561 aa17.11■□□□□ 0.33
AGAP1-206ENST00000418654 CUX1P39880 1505 aa17.11■□□□□ 0.33
AGAP1-206ENST00000418654 PBRM1Q86U86 1689 aa17.03■□□□□ 0.32
AGAP1-206ENST00000418654 KIF13AQ9H1H9 1805 aa17■□□□□ 0.31
AGAP1-206ENST00000418654 ABCA5Q8WWZ7 1642 aa16.96■□□□□ 0.31
AGAP1-206ENST00000418654 CEP170Q5SW79 1584 aa16.96■□□□□ 0.31
AGAP1-206ENST00000418654 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
AGAP1-206ENST00000418654 GRIN2AQ12879 1464 aa16.93■□□□□ 0.3
AGAP1-206ENST00000418654 NUP160Q12769 1436 aa16.93■□□□□ 0.3
AGAP1-206ENST00000418654 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
AGAP1-206ENST00000418654 KDM4FA0A1W2PPD8 638 aa16.9■□□□□ 0.3
AGAP1-206ENST00000418654 ILDR1Q86SU0 546 aaPredicted RBP16.87■□□□□ 0.29
AGAP1-206ENST00000418654 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
AGAP1-206ENST00000418654 ABCC10Q5T3U5 1492 aa16.8■□□□□ 0.28
AGAP1-206ENST00000418654 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
AGAP1-206ENST00000418654 PRG4Q92954 1404 aaPredicted RBP16.79■□□□□ 0.28
AGAP1-206ENST00000418654 FHAD1B1AJZ9 1412 aa16.78■□□□□ 0.28
AGAP1-206ENST00000418654 JPH4Q96JJ6 628 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms