RNA–Protein interactions for RNA: ENST00000418519.5

GSDMB-205, Transcript of gasdermin B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GSDMB, Length 1,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-205ENST00000418519 NISCHQ9Y2I1 1504 aa27.34■■□□□ 1.97
GSDMB-205ENST00000418519 CCDC180Q9P1Z9 1646 aa24.18■■□□□ 1.46
GSDMB-205ENST00000418519 ABCC9O60706 1549 aa23.13■■□□□ 1.29
GSDMB-205ENST00000418519 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
GSDMB-205ENST00000418519 DCAF1Q9Y4B6 1507 aa22.62■■□□□ 1.21
GSDMB-205ENST00000418519 DCAF8L2P0C7V8 631 aa22.54■■□□□ 1.2
GSDMB-205ENST00000418519 NACADO15069 1562 aa22.52■■□□□ 1.2
GSDMB-205ENST00000418519 MYO15BQ96JP2 1530 aa22.5■■□□□ 1.19
GSDMB-205ENST00000418519 RB1CC1Q8TDY2 1594 aa22.46■■□□□ 1.19
GSDMB-205ENST00000418519 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
GSDMB-205ENST00000418519 SCRIBQ14160 1630 aa22.12■■□□□ 1.13
GSDMB-205ENST00000418519 SHROOM4Q9ULL8 1493 aa21.92■■□□□ 1.1
GSDMB-205ENST00000418519 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
GSDMB-205ENST00000418519 PABPN1Q86U42 306 aaKnown RBP eCLIP21.62■■□□□ 1.052e-7■■■□□ 14.9
GSDMB-205ENST00000418519 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
GSDMB-205ENST00000418519 SMARCA4P51532 1647 aa21.18■□□□□ 0.98
GSDMB-205ENST00000418519 EIF4G1Q04637 1599 aaKnown RBP21.17■□□□□ 0.98
GSDMB-205ENST00000418519 BAZ1AQ9NRL2 1556 aaPredicted RBP21.16■□□□□ 0.98
GSDMB-205ENST00000418519 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
GSDMB-205ENST00000418519 CC2D2AQ9P2K1 1620 aa20.99■□□□□ 0.95
GSDMB-205ENST00000418519 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
GSDMB-205ENST00000418519 WIZO95785 1651 aa20.98■□□□□ 0.95
GSDMB-205ENST00000418519 PEG3Q9GZU2 1588 aa20.92■□□□□ 0.94
GSDMB-205ENST00000418519 SMARCA2P51531 1590 aa20.87■□□□□ 0.93
GSDMB-205ENST00000418519 ATAD2BQ9ULI0 1458 aa20.85■□□□□ 0.93
GSDMB-205ENST00000418519 SUPT5HO00267 1087 aaKnown RBP20.79■□□□□ 0.92
GSDMB-205ENST00000418519 HMGXB3Q12766 1538 aa20.75■□□□□ 0.91
GSDMB-205ENST00000418519 NCAPD3P42695 1498 aa20.73■□□□□ 0.91
GSDMB-205ENST00000418519 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
GSDMB-205ENST00000418519 TOP2AP11388 1531 aaKnown RBP20.72■□□□□ 0.91
GSDMB-205ENST00000418519 DNAJC5BQ9UF47 199 aa20.71■□□□□ 0.91
GSDMB-205ENST00000418519 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
GSDMB-205ENST00000418519 PRDM2Q13029 1718 aa20.28■□□□□ 0.84
GSDMB-205ENST00000418519 NESP48681 1621 aa20.19■□□□□ 0.82
GSDMB-205ENST00000418519 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
GSDMB-205ENST00000418519 CFTRP13569 1480 aa20.16■□□□□ 0.82
GSDMB-205ENST00000418519 CADPSQ9ULU8 1353 aa20.13■□□□□ 0.81
GSDMB-205ENST00000418519 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
GSDMB-205ENST00000418519 FANCD2Q9BXW9 1451 aa19.97■□□□□ 0.79
GSDMB-205ENST00000418519 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
GSDMB-205ENST00000418519 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
GSDMB-205ENST00000418519 CEP164Q9UPV0 1460 aa19.9■□□□□ 0.78
GSDMB-205ENST00000418519 ERCC6Q03468 1493 aa19.86■□□□□ 0.77
GSDMB-205ENST00000418519 THOC2Q8NI27 1593 aaKnown RBP19.84■□□□□ 0.77
GSDMB-205ENST00000418519 SYNJ1O43426 1573 aa19.81■□□□□ 0.76
GSDMB-205ENST00000418519 BIVM-ERCC5R4GMW8 1640 aa19.79■□□□□ 0.76
GSDMB-205ENST00000418519 CUX1P39880 1505 aa19.78■□□□□ 0.76
GSDMB-205ENST00000418519 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.76
GSDMB-205ENST00000418519 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.76
GSDMB-205ENST00000418519 URB2Q14146 1524 aaKnown RBP19.77■□□□□ 0.76
GSDMB-205ENST00000418519 MRC2Q9UBG0 1479 aa19.77■□□□□ 0.76
GSDMB-205ENST00000418519 TOP2BQ02880 1626 aa19.75■□□□□ 0.75
GSDMB-205ENST00000418519 TOPBP1Q92547 1522 aa19.73■□□□□ 0.75
GSDMB-205ENST00000418519 WDR62O43379 1518 aa19.72■□□□□ 0.75
GSDMB-205ENST00000418519 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
GSDMB-205ENST00000418519 FGD5Q6ZNL6 1462 aa19.62■□□□□ 0.73
GSDMB-205ENST00000418519 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
GSDMB-205ENST00000418519 TRIM41Q8WV44 630 aa19.57■□□□□ 0.72
GSDMB-205ENST00000418519 WDR97A6NE52 1622 aa19.56■□□□□ 0.72
GSDMB-205ENST00000418519 TARBP1Q13395 1621 aaKnown RBP19.53■□□□□ 0.72
GSDMB-205ENST00000418519 CUX2O14529 1486 aa19.52■□□□□ 0.72
GSDMB-205ENST00000418519 RAD54L2Q9Y4B4 1467 aa19.5■□□□□ 0.71
GSDMB-205ENST00000418519 SOGA1O94964 1423 aa19.45■□□□□ 0.7
GSDMB-205ENST00000418519 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
GSDMB-205ENST00000418519 ABCA10Q8WWZ4 1543 aa19.42■□□□□ 0.7
GSDMB-205ENST00000418519 ABCA5Q8WWZ7 1642 aa19.4■□□□□ 0.7
GSDMB-205ENST00000418519 EIF4G3O43432 1585 aaKnown RBP19.38■□□□□ 0.69
GSDMB-205ENST00000418519 PBRM1Q86U86 1689 aa19.37■□□□□ 0.69
GSDMB-205ENST00000418519 ZNF608Q9ULD9 1512 aaPredicted RBP19.36■□□□□ 0.69
GSDMB-205ENST00000418519 RUSC2Q8N2Y8 1516 aa19.36■□□□□ 0.69
GSDMB-205ENST00000418519 TDRD9Q8NDG6 1382 aaKnown RBP19.29■□□□□ 0.68
GSDMB-205ENST00000418519 KIF27Q86VH2 1401 aa19.29■□□□□ 0.68
GSDMB-205ENST00000418519 AQRO60306 1485 aaKnown RBP eCLIP19.27■□□□□ 0.68
GSDMB-205ENST00000418519 GAPVD1Q14C86 1478 aa19.26■□□□□ 0.67
GSDMB-205ENST00000418519 EEA1Q15075 1411 aa19.23■□□□□ 0.67
GSDMB-205ENST00000418519 ERICH3Q5RHP9 1530 aa19.21■□□□□ 0.67
GSDMB-205ENST00000418519 FAM9AQ8IZU1 332 aaPredicted RBP19.2■□□□□ 0.66
GSDMB-205ENST00000418519 CUL7Q14999 1698 aa19.19■□□□□ 0.66
GSDMB-205ENST00000418519 GRIN2BQ13224 1484 aa19.19■□□□□ 0.66
GSDMB-205ENST00000418519 ADAMTS12P58397 1594 aa19.17■□□□□ 0.66
GSDMB-205ENST00000418519 SNAPC4Q5SXM2 1469 aa19.15■□□□□ 0.66
GSDMB-205ENST00000418519 IGF1RP08069 1367 aa19.13■□□□□ 0.65
GSDMB-205ENST00000418519 KIF21BO75037 1637 aa19.12■□□□□ 0.65
GSDMB-205ENST00000418519 CHD1O14646 1710 aa19.1■□□□□ 0.65
GSDMB-205ENST00000418519 MAGI1Q96QZ7 1491 aaPredicted RBP19.1■□□□□ 0.65
GSDMB-205ENST00000418519 CSRNP3Q8WYN3 585 aa19.09■□□□□ 0.65
GSDMB-205ENST00000418519 PRXQ9BXM0 1461 aa19.08■□□□□ 0.64
GSDMB-205ENST00000418519 CARMIL1Q5VZK9 1371 aa19.04■□□□□ 0.64
GSDMB-205ENST00000418519 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
GSDMB-205ENST00000418519 RAPGEF2Q9Y4G8 1499 aa19.03■□□□□ 0.64
GSDMB-205ENST00000418519 SYNJ2O15056 1496 aa19.02■□□□□ 0.64
GSDMB-205ENST00000418519 CTTNBP2Q8WZ74 1663 aa18.99■□□□□ 0.63
GSDMB-205ENST00000418519 GOLGA3Q08378 1498 aa18.98■□□□□ 0.63
GSDMB-205ENST00000418519 GRIN2AQ12879 1464 aa18.98■□□□□ 0.63
GSDMB-205ENST00000418519 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
GSDMB-205ENST00000418519 CEP170Q5SW79 1584 aa18.93■□□□□ 0.62
GSDMB-205ENST00000418519 FBLN2P98095 1184 aa18.89■□□□□ 0.61
GSDMB-205ENST00000418519 LOC105371045A0A1W2PR82 267 aa18.88■□□□□ 0.61
GSDMB-205ENST00000418519 CHMP7Q8WUX9 453 aaPredicted RBP18.88■□□□□ 0.61
GSDMB-205ENST00000418519 NUP160Q12769 1436 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms