RNA–Protein interactions for RNA: ENST00000418160.5

FLOT1-204, Transcript of flotillin 1, humanhuman

TSL 3

Gene FLOT1, Length 457 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-204ENST00000418160 NISCHQ9Y2I1 1504 aa37.78■■■■□ 3.64
FLOT1-204ENST00000418160 CCDC180Q9P1Z9 1646 aa33.68■■■□□ 2.98
FLOT1-204ENST00000418160 ABCC9O60706 1549 aa32.65■■■□□ 2.82
FLOT1-204ENST00000418160 NACADO15069 1562 aa31.6■■■□□ 2.65
FLOT1-204ENST00000418160 RB1CC1Q8TDY2 1594 aa31.6■■■□□ 2.65
FLOT1-204ENST00000418160 MYO15BQ96JP2 1530 aa31.53■■■□□ 2.64
FLOT1-204ENST00000418160 ZCCHC6Q5VYS8 1495 aaKnown RBP31.52■■■□□ 2.64
FLOT1-204ENST00000418160 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.61
FLOT1-204ENST00000418160 DCAF8L2P0C7V8 631 aa31.23■■■□□ 2.59
FLOT1-204ENST00000418160 UNC13AQ9UPW8 1703 aa30.85■■■□□ 2.53
FLOT1-204ENST00000418160 BICRAQ9NZM4 1560 aa30.6■■■□□ 2.49
FLOT1-204ENST00000418160 SCRIBQ14160 1630 aa30.56■■■□□ 2.48
FLOT1-204ENST00000418160 SHROOM4Q9ULL8 1493 aa30.47■■■□□ 2.47
FLOT1-204ENST00000418160 PABPN1Q86U42 306 aaKnown RBP eCLIP30.41■■■□□ 2.46
FLOT1-204ENST00000418160 DNAJC5BQ9UF47 199 aa29.81■■■□□ 2.36
FLOT1-204ENST00000418160 EIF4G1Q04637 1599 aaKnown RBP29.79■■■□□ 2.36
FLOT1-204ENST00000418160 CC2D2AQ9P2K1 1620 aa29.62■■■□□ 2.33
FLOT1-204ENST00000418160 CECR2Q9BXF3 1484 aa29.39■■■□□ 2.3
FLOT1-204ENST00000418160 SMARCA4P51532 1647 aa29.32■■■□□ 2.28
FLOT1-204ENST00000418160 BAZ1AQ9NRL2 1556 aaPredicted RBP29.32■■■□□ 2.28
FLOT1-204ENST00000418160 SMARCA2P51531 1590 aa29.14■■■□□ 2.26
FLOT1-204ENST00000418160 NCAPD3P42695 1498 aa29.12■■■□□ 2.25
FLOT1-204ENST00000418160 ATAD2BQ9ULI0 1458 aa29.11■■■□□ 2.25
FLOT1-204ENST00000418160 PEG3Q9GZU2 1588 aa29.11■■■□□ 2.25
FLOT1-204ENST00000418160 MROH2BQ7Z745 1585 aa29.06■■■□□ 2.24
FLOT1-204ENST00000418160 HMGXB3Q12766 1538 aa29.04■■■□□ 2.24
FLOT1-204ENST00000418160 BAZ1BQ9UIG0 1483 aaKnown RBP28.87■■■□□ 2.21
FLOT1-204ENST00000418160 RSF1Q96T23 1441 aaPredicted RBP28.76■■■□□ 2.19
FLOT1-204ENST00000418160 WIZO95785 1651 aa28.74■■■□□ 2.19
FLOT1-204ENST00000418160 TOP2AP11388 1531 aaKnown RBP28.53■■■□□ 2.16
FLOT1-204ENST00000418160 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
FLOT1-204ENST00000418160 NESP48681 1621 aa28.27■■■□□ 2.12
FLOT1-204ENST00000418160 CADPSQ9ULU8 1353 aa28.23■■■□□ 2.11
FLOT1-204ENST00000418160 ERCC6Q03468 1493 aa28.18■■■□□ 2.1
FLOT1-204ENST00000418160 PDS5BQ9NTI5 1447 aa28.12■■■□□ 2.09
FLOT1-204ENST00000418160 CFTRP13569 1480 aa28.12■■■□□ 2.09
FLOT1-204ENST00000418160 CCDC88BA6NC98 1476 aa28.11■■■□□ 2.09
FLOT1-204ENST00000418160 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
FLOT1-204ENST00000418160 PRDM2Q13029 1718 aa27.99■■■□□ 2.07
FLOT1-204ENST00000418160 CUX2O14529 1486 aa27.97■■■□□ 2.07
FLOT1-204ENST00000418160 THOC2Q8NI27 1593 aaKnown RBP27.97■■■□□ 2.07
FLOT1-204ENST00000418160 FANCD2Q9BXW9 1451 aa27.9■■■□□ 2.06
FLOT1-204ENST00000418160 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.05
FLOT1-204ENST00000418160 SUPT5HO00267 1087 aaKnown RBP27.88■■■□□ 2.05
FLOT1-204ENST00000418160 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.05
FLOT1-204ENST00000418160 WDR62O43379 1518 aa27.79■■■□□ 2.04
FLOT1-204ENST00000418160 URB2Q14146 1524 aaKnown RBP27.61■■■□□ 2.01
FLOT1-204ENST00000418160 ABCC8Q09428 1581 aa27.55■■■□□ 2
FLOT1-204ENST00000418160 DNMBPQ6XZF7 1577 aa27.5■■□□□ 1.99
FLOT1-204ENST00000418160 TOPBP1Q92547 1522 aa27.47■■□□□ 1.99
FLOT1-204ENST00000418160 IFT140Q96RY7 1462 aa27.32■■□□□ 1.96
FLOT1-204ENST00000418160 CUX1P39880 1505 aa27.28■■□□□ 1.96
FLOT1-204ENST00000418160 POLA1P09884 1462 aaPredicted RBP27.25■■□□□ 1.95
FLOT1-204ENST00000418160 TARBP1Q13395 1621 aaKnown RBP27.2■■□□□ 1.95
FLOT1-204ENST00000418160 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
FLOT1-204ENST00000418160 BIVM-ERCC5R4GMW8 1640 aa27.14■■□□□ 1.94
FLOT1-204ENST00000418160 WRNQ14191 1432 aaPredicted RBP eCLIP27.13■■□□□ 1.93
FLOT1-204ENST00000418160 WDR97A6NE52 1622 aa27.12■■□□□ 1.93
FLOT1-204ENST00000418160 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
FLOT1-204ENST00000418160 ZNF608Q9ULD9 1512 aaPredicted RBP27.09■■□□□ 1.93
FLOT1-204ENST00000418160 SOGA1O94964 1423 aa27.08■■□□□ 1.93
FLOT1-204ENST00000418160 EIF4G3O43432 1585 aaKnown RBP27.08■■□□□ 1.93
FLOT1-204ENST00000418160 SYNJ1O43426 1573 aa27.05■■□□□ 1.92
FLOT1-204ENST00000418160 RAD54L2Q9Y4B4 1467 aa27.04■■□□□ 1.92
FLOT1-204ENST00000418160 ABCA10Q8WWZ4 1543 aa26.97■■□□□ 1.91
FLOT1-204ENST00000418160 AQRO60306 1485 aaKnown RBP eCLIP26.92■■□□□ 1.91e-8■■■■■ 34.6
FLOT1-204ENST00000418160 ABCA5Q8WWZ7 1642 aa26.88■■□□□ 1.89
FLOT1-204ENST00000418160 DNAJC5Q9H3Z4 198 aa26.88■■□□□ 1.89
FLOT1-204ENST00000418160 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
FLOT1-204ENST00000418160 GRIN2BQ13224 1484 aa26.82■■□□□ 1.88
FLOT1-204ENST00000418160 GAPVD1Q14C86 1478 aa26.81■■□□□ 1.88
FLOT1-204ENST00000418160 PBRM1Q86U86 1689 aa26.8■■□□□ 1.88
FLOT1-204ENST00000418160 MAGI1Q96QZ7 1491 aaPredicted RBP26.79■■□□□ 1.88
FLOT1-204ENST00000418160 SNAPC4Q5SXM2 1469 aa26.74■■□□□ 1.87
FLOT1-204ENST00000418160 CHD1O14646 1710 aa26.7■■□□□ 1.86
FLOT1-204ENST00000418160 ERICH3Q5RHP9 1530 aa26.67■■□□□ 1.86
FLOT1-204ENST00000418160 OSCARQ8IYS5 282 aa26.67■■□□□ 1.86
FLOT1-204ENST00000418160 SYNJ2O15056 1496 aa26.65■■□□□ 1.86
FLOT1-204ENST00000418160 ADAMTS12P58397 1594 aa26.6■■□□□ 1.85
FLOT1-204ENST00000418160 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
FLOT1-204ENST00000418160 FHAD1B1AJZ9 1412 aa26.53■■□□□ 1.84
FLOT1-204ENST00000418160 CHMP7Q8WUX9 453 aaPredicted RBP26.5■■□□□ 1.83
FLOT1-204ENST00000418160 FBLN2P98095 1184 aa26.49■■□□□ 1.83
FLOT1-204ENST00000418160 GRIN2AQ12879 1464 aa26.48■■□□□ 1.83
FLOT1-204ENST00000418160 CLASP1Q7Z460 1538 aa26.46■■□□□ 1.83
FLOT1-204ENST00000418160 CUL7Q14999 1698 aa26.46■■□□□ 1.83
FLOT1-204ENST00000418160 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
FLOT1-204ENST00000418160 IGF1RP08069 1367 aa26.4■■□□□ 1.82
FLOT1-204ENST00000418160 NUP160Q12769 1436 aa26.39■■□□□ 1.81
FLOT1-204ENST00000418160 ARHGEF11O15085 1522 aa26.33■■□□□ 1.81
FLOT1-204ENST00000418160 CEP170Q5SW79 1584 aa26.33■■□□□ 1.8
FLOT1-204ENST00000418160 RIMBP3CA6NJZ7 1639 aa26.31■■□□□ 1.8
FLOT1-204ENST00000418160 RIMBP3BA6NNM3 1639 aa26.31■■□□□ 1.8
FLOT1-204ENST00000418160 RIMBP3Q9UFD9 1639 aa26.31■■□□□ 1.8
FLOT1-204ENST00000418160 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
FLOT1-204ENST00000418160 RUSC2Q8N2Y8 1516 aa26.23■■□□□ 1.79
FLOT1-204ENST00000418160 SHROOM2Q13796 1616 aa26.21■■□□□ 1.79
FLOT1-204ENST00000418160 EEA1Q15075 1411 aa26.18■■□□□ 1.78
FLOT1-204ENST00000418160 RAPGEF2Q9Y4G8 1499 aa26.15■■□□□ 1.78
FLOT1-204ENST00000418160 CHIC1Q5VXU3 224 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms