RNA–Protein interactions for RNA: ENST00000417983.5

LINC00475-203, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-203ENST00000417983 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
LINC00475-203ENST00000417983 AEBP2Q6ZN18 517 aaPredicted RBP38.13■■■■□ 3.69
LINC00475-203ENST00000417983 CHIC1Q5VXU3 224 aa35.64■■■■□ 3.3
LINC00475-203ENST00000417983 CCDC180Q9P1Z9 1646 aa35.21■■■■□ 3.23
LINC00475-203ENST00000417983 ABCC9O60706 1549 aa35.2■■■■□ 3.23
LINC00475-203ENST00000417983 RB1CC1Q8TDY2 1594 aa33.55■■■□□ 2.96
LINC00475-203ENST00000417983 NACADO15069 1562 aa33.31■■■□□ 2.92
LINC00475-203ENST00000417983 DCAF8L2P0C7V8 631 aa33.25■■■□□ 2.91
LINC00475-203ENST00000417983 DNAJC5BQ9UF47 199 aa32.86■■■□□ 2.85
LINC00475-203ENST00000417983 MYO15BQ96JP2 1530 aa32.84■■■□□ 2.85
LINC00475-203ENST00000417983 PABPN1Q86U42 306 aaKnown RBP eCLIP32.78■■■□□ 2.84
LINC00475-203ENST00000417983 UNC13AQ9UPW8 1703 aa32.64■■■□□ 2.82
LINC00475-203ENST00000417983 SENP3Q9H4L4 574 aaPredicted RBP32.59■■■□□ 2.81
LINC00475-203ENST00000417983 ZCCHC6Q5VYS8 1495 aaKnown RBP32.53■■■□□ 2.8
LINC00475-203ENST00000417983 BICRAQ9NZM4 1560 aa32.44■■■□□ 2.78
LINC00475-203ENST00000417983 DCAF1Q9Y4B6 1507 aa32.42■■■□□ 2.78
LINC00475-203ENST00000417983 SHROOM4Q9ULL8 1493 aa32.16■■■□□ 2.74
LINC00475-203ENST00000417983 SCRIBQ14160 1630 aa32.11■■■□□ 2.73
LINC00475-203ENST00000417983 PHF23Q9BUL5 403 aaPredicted RBP32.08■■■□□ 2.73
LINC00475-203ENST00000417983 CC2D2AQ9P2K1 1620 aa31.76■■■□□ 2.67
LINC00475-203ENST00000417983 CECR2Q9BXF3 1484 aa31.72■■■□□ 2.67
LINC00475-203ENST00000417983 EIF4G1Q04637 1599 aaKnown RBP31.72■■■□□ 2.67
LINC00475-203ENST00000417983 NCAPD3P42695 1498 aa30.72■■■□□ 2.51
LINC00475-203ENST00000417983 ATAD2BQ9ULI0 1458 aa30.63■■■□□ 2.49
LINC00475-203ENST00000417983 SMARCA2P51531 1590 aa30.61■■■□□ 2.49
LINC00475-203ENST00000417983 SMARCA4P51532 1647 aa30.61■■■□□ 2.49
LINC00475-203ENST00000417983 HMGXB3Q12766 1538 aa30.52■■■□□ 2.48
LINC00475-203ENST00000417983 BAZ1AQ9NRL2 1556 aaPredicted RBP30.51■■■□□ 2.47
LINC00475-203ENST00000417983 ERCC6Q03468 1493 aa30.48■■■□□ 2.47
LINC00475-203ENST00000417983 FOXD1Q16676 465 aa30.45■■■□□ 2.47
LINC00475-203ENST00000417983 BAZ1BQ9UIG0 1483 aaKnown RBP30.4■■■□□ 2.46
LINC00475-203ENST00000417983 CUX2O14529 1486 aa30.36■■■□□ 2.45
LINC00475-203ENST00000417983 PEG3Q9GZU2 1588 aa30.28■■■□□ 2.44
LINC00475-203ENST00000417983 DNAJC5Q9H3Z4 198 aa30.25■■■□□ 2.43
LINC00475-203ENST00000417983 MROH2BQ7Z745 1585 aa30.21■■■□□ 2.43
LINC00475-203ENST00000417983 NESP48681 1621 aa30.19■■■□□ 2.42
LINC00475-203ENST00000417983 LAMC3Q9Y6N6 1575 aa30.06■■■□□ 2.4
LINC00475-203ENST00000417983 PDS5BQ9NTI5 1447 aa29.94■■■□□ 2.38
LINC00475-203ENST00000417983 THOC2Q8NI27 1593 aaKnown RBP29.88■■■□□ 2.37
LINC00475-203ENST00000417983 WIZO95785 1651 aa29.85■■■□□ 2.37
LINC00475-203ENST00000417983 CADPSQ9ULU8 1353 aa29.82■■■□□ 2.36
LINC00475-203ENST00000417983 KIF21AQ7Z4S6 1674 aa29.81■■■□□ 2.36
LINC00475-203ENST00000417983 MRC2Q9UBG0 1479 aa29.63■■■□□ 2.33
LINC00475-203ENST00000417983 RSF1Q96T23 1441 aaPredicted RBP29.62■■■□□ 2.33
LINC00475-203ENST00000417983 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
LINC00475-203ENST00000417983 TOP2AP11388 1531 aaKnown RBP29.53■■■□□ 2.32
LINC00475-203ENST00000417983 WDR62O43379 1518 aa29.52■■■□□ 2.32
LINC00475-203ENST00000417983 FANCD2Q9BXW9 1451 aa29.48■■■□□ 2.31
LINC00475-203ENST00000417983 CFTRP13569 1480 aa29.46■■■□□ 2.31
LINC00475-203ENST00000417983 URB2Q14146 1524 aaKnown RBP29.19■■■□□ 2.26
LINC00475-203ENST00000417983 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
LINC00475-203ENST00000417983 PRDM2Q13029 1718 aa29.15■■■□□ 2.26
LINC00475-203ENST00000417983 TRIM41Q8WV44 630 aa29.03■■■□□ 2.24
LINC00475-203ENST00000417983 POTEDQ86YR6 584 aa29.01■■■□□ 2.23
LINC00475-203ENST00000417983 OSCARQ8IYS5 282 aa29.01■■■□□ 2.23
LINC00475-203ENST00000417983 IFT140Q96RY7 1462 aa28.96■■■□□ 2.23
LINC00475-203ENST00000417983 ABCC8Q09428 1581 aa28.93■■■□□ 2.22
LINC00475-203ENST00000417983 TOPBP1Q92547 1522 aa28.91■■■□□ 2.22
LINC00475-203ENST00000417983 DNMBPQ6XZF7 1577 aa28.83■■■□□ 2.21
LINC00475-203ENST00000417983 ZNF608Q9ULD9 1512 aaPredicted RBP28.82■■■□□ 2.2
LINC00475-203ENST00000417983 MSH5O43196 834 aa28.71■■■□□ 2.19
LINC00475-203ENST00000417983 EIF4G3O43432 1585 aaKnown RBP28.69■■■□□ 2.18
LINC00475-203ENST00000417983 POLA1P09884 1462 aaPredicted RBP28.61■■■□□ 2.17
LINC00475-203ENST00000417983 TARBP1Q13395 1621 aaKnown RBP28.6■■■□□ 2.17
LINC00475-203ENST00000417983 AQRO60306 1485 aaKnown RBP eCLIP28.59■■■□□ 2.17
LINC00475-203ENST00000417983 RIMBP3CA6NJZ7 1639 aa28.54■■■□□ 2.16
LINC00475-203ENST00000417983 RIMBP3BA6NNM3 1639 aa28.54■■■□□ 2.16
LINC00475-203ENST00000417983 RIMBP3Q9UFD9 1639 aa28.54■■■□□ 2.16
LINC00475-203ENST00000417983 SOGA1O94964 1423 aa28.52■■■□□ 2.16
LINC00475-203ENST00000417983 FBLN2P98095 1184 aa28.52■■■□□ 2.16
LINC00475-203ENST00000417983 RAD54L2Q9Y4B4 1467 aa28.5■■■□□ 2.15
LINC00475-203ENST00000417983 ARHGEF11O15085 1522 aa28.48■■■□□ 2.15
LINC00475-203ENST00000417983 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
LINC00475-203ENST00000417983 CHD1O14646 1710 aa28.45■■■□□ 2.14
LINC00475-203ENST00000417983 TDRD9Q8NDG6 1382 aaKnown RBP28.45■■■□□ 2.14
LINC00475-203ENST00000417983 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
LINC00475-203ENST00000417983 WDR97A6NE52 1622 aa28.4■■■□□ 2.14
LINC00475-203ENST00000417983 CUX1P39880 1505 aa28.39■■■□□ 2.14
LINC00475-203ENST00000417983 SNAPC4Q5SXM2 1469 aa28.34■■■□□ 2.13
LINC00475-203ENST00000417983 CYB5RLQ6IPT4 315 aa28.31■■■□□ 2.12
LINC00475-203ENST00000417983 CHMP7Q8WUX9 453 aaPredicted RBP28.31■■■□□ 2.12
LINC00475-203ENST00000417983 PIAS4Q8N2W9 510 aaPredicted RBP28.3■■■□□ 2.12
LINC00475-203ENST00000417983 GRIN2BQ13224 1484 aa28.28■■■□□ 2.12
LINC00475-203ENST00000417983 MAGI1Q96QZ7 1491 aaPredicted RBP28.28■■■□□ 2.12
LINC00475-203ENST00000417983 SYNJ1O43426 1573 aa28.2■■■□□ 2.11
LINC00475-203ENST00000417983 PLPPR3Q6T4P5 718 aa28.2■■■□□ 2.1
LINC00475-203ENST00000417983 GAPVD1Q14C86 1478 aa28.18■■■□□ 2.1
LINC00475-203ENST00000417983 SYNJ2O15056 1496 aa28.17■■■□□ 2.1
LINC00475-203ENST00000417983 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
LINC00475-203ENST00000417983 ABCA10Q8WWZ4 1543 aa28.13■■■□□ 2.09
LINC00475-203ENST00000417983 PBRM1Q86U86 1689 aa28.12■■■□□ 2.09
LINC00475-203ENST00000417983 CLASP1Q7Z460 1538 aa28.12■■■□□ 2.09
LINC00475-203ENST00000417983 WRNQ14191 1432 aaPredicted RBP eCLIP28.09■■■□□ 2.09
LINC00475-203ENST00000417983 TRHP20396 242 aaPredicted RBP28.06■■■□□ 2.08
LINC00475-203ENST00000417983 ABCA5Q8WWZ7 1642 aa28.05■■■□□ 2.08
LINC00475-203ENST00000417983 PPP6R1Q9UPN7 881 aa28.03■■■□□ 2.08
LINC00475-203ENST00000417983 TOP2BQ02880 1626 aa27.98■■■□□ 2.07
LINC00475-203ENST00000417983 BIVM-ERCC5R4GMW8 1640 aa27.96■■■□□ 2.07
LINC00475-203ENST00000417983 GRIN2AQ12879 1464 aa27.89■■■□□ 2.06
LINC00475-203ENST00000417983 ADRA2BP18089 450 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms