RNA–Protein interactions for RNA: ENST00000417542.1

AL355339.1-202, humanhuman

TSL 2 BASIC

Gene AL355339.1, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355339.1-202ENST00000417542 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
AL355339.1-202ENST00000417542 CHIC1Q5VXU3 224 aa17.77■□□□□ 0.44
AL355339.1-202ENST00000417542 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
AL355339.1-202ENST00000417542 PHF23Q9BUL5 403 aaPredicted RBP16■□□□□ 0.15
AL355339.1-202ENST00000417542 NISCHQ9Y2I1 1504 aa15.23■□□□□ 0.03
AL355339.1-202ENST00000417542 FOXD1Q16676 465 aa15.22■□□□□ 0.03
AL355339.1-202ENST00000417542 POTEDQ86YR6 584 aa15.02■□□□□ -0
AL355339.1-202ENST00000417542 MSH5O43196 834 aa14.5□□□□□ -0.09
AL355339.1-202ENST00000417542 ABCC9O60706 1549 aa14.37□□□□□ -0.11
AL355339.1-202ENST00000417542 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
AL355339.1-202ENST00000417542 DNAJC5BQ9UF47 199 aa13.91□□□□□ -0.18
AL355339.1-202ENST00000417542 CCDC180Q9P1Z9 1646 aa13.83□□□□□ -0.2
AL355339.1-202ENST00000417542 PPP6R1Q9UPN7 881 aa13.81□□□□□ -0.2
AL355339.1-202ENST00000417542 PLPPR3Q6T4P5 718 aa13.78□□□□□ -0.2
AL355339.1-202ENST00000417542 ADRA2BP18089 450 aa13.76□□□□□ -0.21
AL355339.1-202ENST00000417542 RB1CC1Q8TDY2 1594 aa13.43□□□□□ -0.26
AL355339.1-202ENST00000417542 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
AL355339.1-202ENST00000417542 NACADO15069 1562 aa13.21□□□□□ -0.29
AL355339.1-202ENST00000417542 DCAF8L2P0C7V8 631 aa13.2□□□□□ -0.3
AL355339.1-202ENST00000417542 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
AL355339.1-202ENST00000417542 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
AL355339.1-202ENST00000417542 BICRAQ9NZM4 1560 aa13.04□□□□□ -0.32
AL355339.1-202ENST00000417542 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
AL355339.1-202ENST00000417542 CC2D2AQ9P2K1 1620 aa12.92□□□□□ -0.34
AL355339.1-202ENST00000417542 MYO15BQ96JP2 1530 aa12.84□□□□□ -0.35
AL355339.1-202ENST00000417542 DMRT2Q9Y5R5 561 aa12.82□□□□□ -0.36
AL355339.1-202ENST00000417542 CACNB1Q02641 598 aaPredicted RBP12.79□□□□□ -0.36
AL355339.1-202ENST00000417542 MAPK8IP2Q13387 824 aaPredicted RBP12.79□□□□□ -0.36
AL355339.1-202ENST00000417542 SHROOM4Q9ULL8 1493 aa12.78□□□□□ -0.36
AL355339.1-202ENST00000417542 EIF4G1Q04637 1599 aaKnown RBP12.77□□□□□ -0.36
AL355339.1-202ENST00000417542 SCAF1Q9H7N4 1312 aaKnown RBP12.65□□□□□ -0.38
AL355339.1-202ENST00000417542 SCRIBQ14160 1630 aa12.63□□□□□ -0.39
AL355339.1-202ENST00000417542 CUX2O14529 1486 aa12.53□□□□□ -0.4
AL355339.1-202ENST00000417542 DCAF1Q9Y4B6 1507 aa12.52□□□□□ -0.41
AL355339.1-202ENST00000417542 ZCCHC6Q5VYS8 1495 aaKnown RBP12.51□□□□□ -0.41
AL355339.1-202ENST00000417542 ERCC6Q03468 1493 aa12.44□□□□□ -0.42
AL355339.1-202ENST00000417542 DCAF8L1A6NGE4 600 aa12.4□□□□□ -0.42
AL355339.1-202ENST00000417542 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
AL355339.1-202ENST00000417542 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
AL355339.1-202ENST00000417542 NCAPD3P42695 1498 aa12.21□□□□□ -0.45
AL355339.1-202ENST00000417542 NESP48681 1621 aa12.21□□□□□ -0.46
AL355339.1-202ENST00000417542 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
AL355339.1-202ENST00000417542 ATAD2BQ9ULI0 1458 aa12.13□□□□□ -0.47
AL355339.1-202ENST00000417542 THOC2Q8NI27 1593 aaKnown RBP12.12□□□□□ -0.47
AL355339.1-202ENST00000417542 C1QBPQ07021 282 aaKnown RBP12.11□□□□□ -0.47
AL355339.1-202ENST00000417542 SMARCA2P51531 1590 aa12.07□□□□□ -0.48
AL355339.1-202ENST00000417542 HMGXB3Q12766 1538 aa12.06□□□□□ -0.48
AL355339.1-202ENST00000417542 LAMC3Q9Y6N6 1575 aa12.01□□□□□ -0.49
AL355339.1-202ENST00000417542 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
AL355339.1-202ENST00000417542 PPP4R3CPQ6ZMV5 832 aa11.99□□□□□ -0.49
AL355339.1-202ENST00000417542 PDS5BQ9NTI5 1447 aa11.99□□□□□ -0.49
AL355339.1-202ENST00000417542 BAZ1BQ9UIG0 1483 aaKnown RBP11.99□□□□□ -0.49
AL355339.1-202ENST00000417542 SMARCA4P51532 1647 aa11.98□□□□□ -0.49
AL355339.1-202ENST00000417542 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
AL355339.1-202ENST00000417542 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
AL355339.1-202ENST00000417542 RNF216Q9NWF9 866 aaPredicted RBP11.91□□□□□ -0.5
AL355339.1-202ENST00000417542 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
AL355339.1-202ENST00000417542 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
AL355339.1-202ENST00000417542 WDR62O43379 1518 aa11.86□□□□□ -0.51
AL355339.1-202ENST00000417542 CADPSQ9ULU8 1353 aa11.85□□□□□ -0.51
AL355339.1-202ENST00000417542 PEG3Q9GZU2 1588 aa11.83□□□□□ -0.52
AL355339.1-202ENST00000417542 RIMBP3CA6NJZ7 1639 aa11.79□□□□□ -0.52
AL355339.1-202ENST00000417542 RIMBP3BA6NNM3 1639 aa11.79□□□□□ -0.52
AL355339.1-202ENST00000417542 RIMBP3Q9UFD9 1639 aa11.79□□□□□ -0.52
AL355339.1-202ENST00000417542 CEP164Q9UPV0 1460 aa11.76□□□□□ -0.53
AL355339.1-202ENST00000417542 TRHP20396 242 aaPredicted RBP11.76□□□□□ -0.53
AL355339.1-202ENST00000417542 MROH2BQ7Z745 1585 aa11.75□□□□□ -0.53
AL355339.1-202ENST00000417542 CYB5RLQ6IPT4 315 aa11.72□□□□□ -0.53
AL355339.1-202ENST00000417542 FANCD2Q9BXW9 1451 aa11.71□□□□□ -0.53
AL355339.1-202ENST00000417542 ARHGEF11O15085 1522 aa11.7□□□□□ -0.54
AL355339.1-202ENST00000417542 POTEHQ6S545 545 aa11.7□□□□□ -0.54
AL355339.1-202ENST00000417542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.63□□□□□ -0.55
AL355339.1-202ENST00000417542 URB2Q14146 1524 aaKnown RBP11.63□□□□□ -0.55
AL355339.1-202ENST00000417542 WIZO95785 1651 aa11.59□□□□□ -0.55
AL355339.1-202ENST00000417542 CFTRP13569 1480 aa11.59□□□□□ -0.55
AL355339.1-202ENST00000417542 ZNF608Q9ULD9 1512 aaPredicted RBP11.58□□□□□ -0.56
AL355339.1-202ENST00000417542 ARAP1Q96P48 1450 aa11.56□□□□□ -0.56
AL355339.1-202ENST00000417542 IFT140Q96RY7 1462 aa11.54□□□□□ -0.56
AL355339.1-202ENST00000417542 NCBP3Q53F19 620 aaKnown RBP11.52□□□□□ -0.57
AL355339.1-202ENST00000417542 FBLN2P98095 1184 aa11.51□□□□□ -0.57
AL355339.1-202ENST00000417542 CHD1O14646 1710 aa11.47□□□□□ -0.57
AL355339.1-202ENST00000417542 RSF1Q96T23 1441 aaPredicted RBP11.47□□□□□ -0.57
AL355339.1-202ENST00000417542 EIF4G3O43432 1585 aaKnown RBP11.46□□□□□ -0.57
AL355339.1-202ENST00000417542 AQRO60306 1485 aaKnown RBP eCLIP11.44□□□□□ -0.58
AL355339.1-202ENST00000417542 TOPBP1Q92547 1522 aa11.43□□□□□ -0.58
AL355339.1-202ENST00000417542 PRDM2Q13029 1718 aa11.39□□□□□ -0.59
AL355339.1-202ENST00000417542 TOP2AP11388 1531 aaKnown RBP11.39□□□□□ -0.59
AL355339.1-202ENST00000417542 ABCC8Q09428 1581 aa11.37□□□□□ -0.59
AL355339.1-202ENST00000417542 TARBP1Q13395 1621 aaKnown RBP11.34□□□□□ -0.59
AL355339.1-202ENST00000417542 DSG3P32926 999 aa11.33□□□□□ -0.6
AL355339.1-202ENST00000417542 DNMBPQ6XZF7 1577 aa11.33□□□□□ -0.6
AL355339.1-202ENST00000417542 CAPN15O75808 1086 aa11.32□□□□□ -0.6
AL355339.1-202ENST00000417542 CHMP7Q8WUX9 453 aaPredicted RBP11.32□□□□□ -0.6
AL355339.1-202ENST00000417542 CLASP1Q7Z460 1538 aa11.31□□□□□ -0.6
AL355339.1-202ENST00000417542 TDRD9Q8NDG6 1382 aaKnown RBP11.3□□□□□ -0.6
AL355339.1-202ENST00000417542 CCDC88BA6NC98 1476 aa11.3□□□□□ -0.6
AL355339.1-202ENST00000417542 ILDR1Q86SU0 546 aaPredicted RBP11.29□□□□□ -0.6
AL355339.1-202ENST00000417542 SNAPC4Q5SXM2 1469 aa11.29□□□□□ -0.6
AL355339.1-202ENST00000417542 SYNJ1O43426 1573 aa11.28□□□□□ -0.6
AL355339.1-202ENST00000417542 POLA1P09884 1462 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms