RNA–Protein interactions for RNA: ENST00000417437.6

VNN3-205, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-205ENST00000417437 NISCHQ9Y2I1 1504 aa15.64■□□□□ 0.09
VNN3-205ENST00000417437 AEBP2Q6ZN18 517 aaPredicted RBP15.42■□□□□ 0.06
VNN3-205ENST00000417437 ABCC9O60706 1549 aa14.5□□□□□ -0.09
VNN3-205ENST00000417437 CHIC1Q5VXU3 224 aa14.38□□□□□ -0.11
VNN3-205ENST00000417437 CCDC180Q9P1Z9 1646 aa14.18□□□□□ -0.14
VNN3-205ENST00000417437 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
VNN3-205ENST00000417437 RB1CC1Q8TDY2 1594 aa13.67□□□□□ -0.22
VNN3-205ENST00000417437 DCAF8L2P0C7V8 631 aa13.54□□□□□ -0.24
VNN3-205ENST00000417437 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
VNN3-205ENST00000417437 NACADO15069 1562 aa13.48□□□□□ -0.25
VNN3-205ENST00000417437 UNC13AQ9UPW8 1703 aa13.35□□□□□ -0.27
VNN3-205ENST00000417437 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.29
VNN3-205ENST00000417437 BICRAQ9NZM4 1560 aa13.19□□□□□ -0.3
VNN3-205ENST00000417437 MYO15BQ96JP2 1530 aa13.12□□□□□ -0.31
VNN3-205ENST00000417437 CECR2Q9BXF3 1484 aa13.08□□□□□ -0.32
VNN3-205ENST00000417437 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
VNN3-205ENST00000417437 SHROOM4Q9ULL8 1493 aa12.99□□□□□ -0.33
VNN3-205ENST00000417437 PHF23Q9BUL5 403 aaPredicted RBP12.99□□□□□ -0.33
VNN3-205ENST00000417437 SCRIBQ14160 1630 aa12.95□□□□□ -0.34
VNN3-205ENST00000417437 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
VNN3-205ENST00000417437 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
VNN3-205ENST00000417437 ZCCHC6Q5VYS8 1495 aaKnown RBP12.87□□□□□ -0.35
VNN3-205ENST00000417437 DCAF1Q9Y4B6 1507 aa12.86□□□□□ -0.35
VNN3-205ENST00000417437 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
VNN3-205ENST00000417437 CUX2O14529 1486 aa12.58□□□□□ -0.4
VNN3-205ENST00000417437 POTEDQ86YR6 584 aa12.57□□□□□ -0.4
VNN3-205ENST00000417437 NCAPD3P42695 1498 aa12.4□□□□□ -0.42
VNN3-205ENST00000417437 FOXD1Q16676 465 aa12.4□□□□□ -0.42
VNN3-205ENST00000417437 TRIM41Q8WV44 630 aa12.35□□□□□ -0.43
VNN3-205ENST00000417437 SMARCA2P51531 1590 aa12.34□□□□□ -0.43
VNN3-205ENST00000417437 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
VNN3-205ENST00000417437 NESP48681 1621 aa12.33□□□□□ -0.43
VNN3-205ENST00000417437 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
VNN3-205ENST00000417437 SMARCA4P51532 1647 aa12.28□□□□□ -0.44
VNN3-205ENST00000417437 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.45
VNN3-205ENST00000417437 THOC2Q8NI27 1593 aaKnown RBP12.24□□□□□ -0.45
VNN3-205ENST00000417437 LAMC3Q9Y6N6 1575 aa12.22□□□□□ -0.45
VNN3-205ENST00000417437 KIF21AQ7Z4S6 1674 aa12.21□□□□□ -0.45
VNN3-205ENST00000417437 BAZ1AQ9NRL2 1556 aaPredicted RBP12.19□□□□□ -0.46
VNN3-205ENST00000417437 PDS5BQ9NTI5 1447 aa12.19□□□□□ -0.46
VNN3-205ENST00000417437 PEG3Q9GZU2 1588 aa12.1□□□□□ -0.47
VNN3-205ENST00000417437 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.48
VNN3-205ENST00000417437 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
VNN3-205ENST00000417437 MROH2BQ7Z745 1585 aa12.05□□□□□ -0.48
VNN3-205ENST00000417437 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
VNN3-205ENST00000417437 WDR62O43379 1518 aa12.01□□□□□ -0.49
VNN3-205ENST00000417437 CEP164Q9UPV0 1460 aa11.99□□□□□ -0.49
VNN3-205ENST00000417437 FANCD2Q9BXW9 1451 aa11.94□□□□□ -0.5
VNN3-205ENST00000417437 WIZO95785 1651 aa11.94□□□□□ -0.5
VNN3-205ENST00000417437 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
VNN3-205ENST00000417437 RIMBP3BA6NNM3 1639 aa11.86□□□□□ -0.51
VNN3-205ENST00000417437 RIMBP3Q9UFD9 1639 aa11.86□□□□□ -0.51
VNN3-205ENST00000417437 CFTRP13569 1480 aa11.83□□□□□ -0.52
VNN3-205ENST00000417437 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
VNN3-205ENST00000417437 URB2Q14146 1524 aaKnown RBP11.81□□□□□ -0.52
VNN3-205ENST00000417437 CYB5RLQ6IPT4 315 aa11.79□□□□□ -0.52
VNN3-205ENST00000417437 ARHGEF11O15085 1522 aa11.77□□□□□ -0.52
VNN3-205ENST00000417437 PRDM2Q13029 1718 aa11.77□□□□□ -0.53
VNN3-205ENST00000417437 MSH5O43196 834 aa11.76□□□□□ -0.53
VNN3-205ENST00000417437 IFT140Q96RY7 1462 aa11.74□□□□□ -0.53
VNN3-205ENST00000417437 TOP2AP11388 1531 aaKnown RBP11.73□□□□□ -0.53
VNN3-205ENST00000417437 FBLN2P98095 1184 aa11.73□□□□□ -0.53
VNN3-205ENST00000417437 ZNF608Q9ULD9 1512 aaPredicted RBP11.72□□□□□ -0.53
VNN3-205ENST00000417437 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
VNN3-205ENST00000417437 CHD1O14646 1710 aa11.68□□□□□ -0.54
VNN3-205ENST00000417437 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
VNN3-205ENST00000417437 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
VNN3-205ENST00000417437 ABCC8Q09428 1581 aa11.66□□□□□ -0.54
VNN3-205ENST00000417437 AQRO60306 1485 aaKnown RBP eCLIP11.62□□□□□ -0.55
VNN3-205ENST00000417437 CCDC88BA6NC98 1476 aa11.61□□□□□ -0.55
VNN3-205ENST00000417437 ARAP1Q96P48 1450 aa11.61□□□□□ -0.55
VNN3-205ENST00000417437 DNMBPQ6XZF7 1577 aa11.6□□□□□ -0.55
VNN3-205ENST00000417437 CHMP7Q8WUX9 453 aaPredicted RBP11.55□□□□□ -0.56
VNN3-205ENST00000417437 TARBP1Q13395 1621 aaKnown RBP11.55□□□□□ -0.56
VNN3-205ENST00000417437 TDRD9Q8NDG6 1382 aaKnown RBP11.52□□□□□ -0.57
VNN3-205ENST00000417437 SOGA1O94964 1423 aa11.52□□□□□ -0.57
VNN3-205ENST00000417437 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
VNN3-205ENST00000417437 SYNJ1O43426 1573 aa11.5□□□□□ -0.57
VNN3-205ENST00000417437 RAD54L2Q9Y4B4 1467 aa11.5□□□□□ -0.57
VNN3-205ENST00000417437 SNAPC4Q5SXM2 1469 aa11.49□□□□□ -0.57
VNN3-205ENST00000417437 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
VNN3-205ENST00000417437 SUPT5HO00267 1087 aaKnown RBP11.45□□□□□ -0.58
VNN3-205ENST00000417437 CLASP1Q7Z460 1538 aa11.45□□□□□ -0.58
VNN3-205ENST00000417437 MAGI1Q96QZ7 1491 aaPredicted RBP11.44□□□□□ -0.58
VNN3-205ENST00000417437 WDR97A6NE52 1622 aa11.43□□□□□ -0.58
VNN3-205ENST00000417437 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
VNN3-205ENST00000417437 GRIN2BQ13224 1484 aa11.42□□□□□ -0.58
VNN3-205ENST00000417437 SYNJ2O15056 1496 aa11.41□□□□□ -0.58
VNN3-205ENST00000417437 GAPVD1Q14C86 1478 aa11.41□□□□□ -0.58
VNN3-205ENST00000417437 PBRM1Q86U86 1689 aa11.38□□□□□ -0.59
VNN3-205ENST00000417437 CUX1P39880 1505 aa11.34□□□□□ -0.59
VNN3-205ENST00000417437 ERCC6L2Q5T890 1561 aa11.27□□□□□ -0.61
VNN3-205ENST00000417437 GRIN2AQ12879 1464 aa11.26□□□□□ -0.61
VNN3-205ENST00000417437 NPM1P06748 294 aaKnown RBP eCLIP11.26□□□□□ -0.61
VNN3-205ENST00000417437 CEP170Q5SW79 1584 aa11.25□□□□□ -0.61
VNN3-205ENST00000417437 ABCA5Q8WWZ7 1642 aa11.25□□□□□ -0.61
VNN3-205ENST00000417437 ABCA10Q8WWZ4 1543 aa11.25□□□□□ -0.61
VNN3-205ENST00000417437 KIF13AQ9H1H9 1805 aa11.24□□□□□ -0.61
VNN3-205ENST00000417437 FAM69CQ0P6D2 419 aa11.22□□□□□ -0.61
VNN3-205ENST00000417437 PPP6R1Q9UPN7 881 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms