RNA–Protein interactions for RNA: ENST00000417424.1

SGSM3-202, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-202ENST00000417424 NISCHQ9Y2I1 1504 aa35.4■■■■□ 3.26
SGSM3-202ENST00000417424 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
SGSM3-202ENST00000417424 ABCC9O60706 1549 aa31.61■■■□□ 2.65
SGSM3-202ENST00000417424 RB1CC1Q8TDY2 1594 aa30.11■■■□□ 2.41
SGSM3-202ENST00000417424 NACADO15069 1562 aa29.93■■■□□ 2.38
SGSM3-202ENST00000417424 DCAF8L2P0C7V8 631 aa29.72■■■□□ 2.35
SGSM3-202ENST00000417424 MYO15BQ96JP2 1530 aa29.57■■■□□ 2.32
SGSM3-202ENST00000417424 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
SGSM3-202ENST00000417424 UNC13AQ9UPW8 1703 aa29.42■■■□□ 2.3
SGSM3-202ENST00000417424 PABPN1Q86U42 306 aaKnown RBP eCLIP29.41■■■□□ 2.3
SGSM3-202ENST00000417424 ZCCHC6Q5VYS8 1495 aaKnown RBP29.41■■■□□ 2.3
SGSM3-202ENST00000417424 BICRAQ9NZM4 1560 aa29.27■■■□□ 2.28
SGSM3-202ENST00000417424 DCAF1Q9Y4B6 1507 aa29.24■■■□□ 2.27
SGSM3-202ENST00000417424 SCRIBQ14160 1630 aa28.95■■■□□ 2.23
SGSM3-202ENST00000417424 SHROOM4Q9ULL8 1493 aa28.88■■■□□ 2.21
SGSM3-202ENST00000417424 CC2D2AQ9P2K1 1620 aa28.55■■■□□ 2.16
SGSM3-202ENST00000417424 EIF4G1Q04637 1599 aaKnown RBP28.54■■■□□ 2.16
SGSM3-202ENST00000417424 CECR2Q9BXF3 1484 aa28.46■■■□□ 2.15
SGSM3-202ENST00000417424 NCAPD3P42695 1498 aa27.63■■■□□ 2.01
SGSM3-202ENST00000417424 SMARCA4P51532 1647 aa27.61■■■□□ 2.01
SGSM3-202ENST00000417424 ATAD2BQ9ULI0 1458 aa27.59■■■□□ 2.01
SGSM3-202ENST00000417424 SMARCA2P51531 1590 aa27.51■■□□□ 1.99
SGSM3-202ENST00000417424 HMGXB3Q12766 1538 aa27.48■■□□□ 1.99
SGSM3-202ENST00000417424 BAZ1AQ9NRL2 1556 aaPredicted RBP27.47■■□□□ 1.99
SGSM3-202ENST00000417424 PEG3Q9GZU2 1588 aa27.34■■□□□ 1.97
SGSM3-202ENST00000417424 BAZ1BQ9UIG0 1483 aaKnown RBP27.33■■□□□ 1.97
SGSM3-202ENST00000417424 MROH2BQ7Z745 1585 aa27.3■■□□□ 1.96
SGSM3-202ENST00000417424 ERCC6Q03468 1493 aa27.27■■□□□ 1.96
SGSM3-202ENST00000417424 NESP48681 1621 aa27.2■■□□□ 1.95
SGSM3-202ENST00000417424 CUX2O14529 1486 aa27.18■■□□□ 1.94
SGSM3-202ENST00000417424 LAMC3Q9Y6N6 1575 aa27■■□□□ 1.91
SGSM3-202ENST00000417424 WIZO95785 1651 aa26.95■■□□□ 1.91
SGSM3-202ENST00000417424 DNAJC5Q9H3Z4 198 aa26.95■■□□□ 1.9
SGSM3-202ENST00000417424 THOC2Q8NI27 1593 aaKnown RBP26.93■■□□□ 1.9
SGSM3-202ENST00000417424 KIF21AQ7Z4S6 1674 aa26.84■■□□□ 1.89
SGSM3-202ENST00000417424 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
SGSM3-202ENST00000417424 CADPSQ9ULU8 1353 aa26.79■■□□□ 1.88
SGSM3-202ENST00000417424 RSF1Q96T23 1441 aaPredicted RBP26.76■■□□□ 1.87
SGSM3-202ENST00000417424 TOP2AP11388 1531 aaKnown RBP26.65■■□□□ 1.86
SGSM3-202ENST00000417424 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
SGSM3-202ENST00000417424 WDR62O43379 1518 aa26.58■■□□□ 1.85
SGSM3-202ENST00000417424 CFTRP13569 1480 aa26.54■■□□□ 1.84
SGSM3-202ENST00000417424 CEP164Q9UPV0 1460 aa26.54■■□□□ 1.84
SGSM3-202ENST00000417424 FANCD2Q9BXW9 1451 aa26.52■■□□□ 1.84
SGSM3-202ENST00000417424 SUPT5HO00267 1087 aaKnown RBP26.49■■□□□ 1.83
SGSM3-202ENST00000417424 CCDC88BA6NC98 1476 aa26.32■■□□□ 1.8
SGSM3-202ENST00000417424 URB2Q14146 1524 aaKnown RBP26.32■■□□□ 1.8
SGSM3-202ENST00000417424 PRDM2Q13029 1718 aa26.25■■□□□ 1.79
SGSM3-202ENST00000417424 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
SGSM3-202ENST00000417424 IFT140Q96RY7 1462 aa25.99■■□□□ 1.75
SGSM3-202ENST00000417424 ZNF608Q9ULD9 1512 aaPredicted RBP25.97■■□□□ 1.75
SGSM3-202ENST00000417424 DNMBPQ6XZF7 1577 aa25.95■■□□□ 1.75
SGSM3-202ENST00000417424 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
SGSM3-202ENST00000417424 OSCARQ8IYS5 282 aa25.87■■□□□ 1.73
SGSM3-202ENST00000417424 EIF4G3O43432 1585 aaKnown RBP25.86■■□□□ 1.73
SGSM3-202ENST00000417424 TRIM41Q8WV44 630 aa25.85■■□□□ 1.73
SGSM3-202ENST00000417424 TARBP1Q13395 1621 aaKnown RBP25.8■■□□□ 1.72
SGSM3-202ENST00000417424 POLA1P09884 1462 aaPredicted RBP25.79■■□□□ 1.72
SGSM3-202ENST00000417424 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.715e-7■■■□□ 18.3
SGSM3-202ENST00000417424 RAD54L2Q9Y4B4 1467 aa25.68■■□□□ 1.7
SGSM3-202ENST00000417424 CUX1P39880 1505 aa25.65■■□□□ 1.7
SGSM3-202ENST00000417424 FGD5Q6ZNL6 1462 aa25.65■■□□□ 1.7
SGSM3-202ENST00000417424 RIMBP3CA6NJZ7 1639 aa25.62■■□□□ 1.69
SGSM3-202ENST00000417424 RIMBP3BA6NNM3 1639 aa25.62■■□□□ 1.69
SGSM3-202ENST00000417424 RIMBP3Q9UFD9 1639 aa25.62■■□□□ 1.69
SGSM3-202ENST00000417424 SOGA1O94964 1423 aa25.61■■□□□ 1.69
SGSM3-202ENST00000417424 CHD1O14646 1710 aa25.59■■□□□ 1.69
SGSM3-202ENST00000417424 TDRD9Q8NDG6 1382 aaKnown RBP25.57■■□□□ 1.68
SGSM3-202ENST00000417424 ARHGEF11O15085 1522 aa25.56■■□□□ 1.68
SGSM3-202ENST00000417424 WDR97A6NE52 1622 aa25.52■■□□□ 1.68
SGSM3-202ENST00000417424 SNAPC4Q5SXM2 1469 aa25.5■■□□□ 1.67
SGSM3-202ENST00000417424 FBLN2P98095 1184 aa25.47■■□□□ 1.67
SGSM3-202ENST00000417424 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
SGSM3-202ENST00000417424 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
SGSM3-202ENST00000417424 ABCA10Q8WWZ4 1543 aa25.35■■□□□ 1.65
SGSM3-202ENST00000417424 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
SGSM3-202ENST00000417424 CLASP1Q7Z460 1538 aa25.34■■□□□ 1.65
SGSM3-202ENST00000417424 GAPVD1Q14C86 1478 aa25.34■■□□□ 1.65
SGSM3-202ENST00000417424 ABCA5Q8WWZ7 1642 aa25.33■■□□□ 1.65
SGSM3-202ENST00000417424 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
SGSM3-202ENST00000417424 SYNJ2O15056 1496 aa25.32■■□□□ 1.64
SGSM3-202ENST00000417424 CHMP7Q8WUX9 453 aaPredicted RBP25.29■■□□□ 1.64
SGSM3-202ENST00000417424 SYNJ1O43426 1573 aa25.29■■□□□ 1.64
SGSM3-202ENST00000417424 CYB5RLQ6IPT4 315 aa25.27■■□□□ 1.64
SGSM3-202ENST00000417424 TOP2BQ02880 1626 aa25.25■■□□□ 1.63
SGSM3-202ENST00000417424 BIVM-ERCC5R4GMW8 1640 aa25.25■■□□□ 1.63
SGSM3-202ENST00000417424 WRNQ14191 1432 aaPredicted RBP eCLIP25.24■■□□□ 1.63
SGSM3-202ENST00000417424 ADAMTS12P58397 1594 aa25.14■■□□□ 1.62
SGSM3-202ENST00000417424 GRIN2AQ12879 1464 aa25.1■■□□□ 1.61
SGSM3-202ENST00000417424 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
SGSM3-202ENST00000417424 CEP170Q5SW79 1584 aa25.03■■□□□ 1.6
SGSM3-202ENST00000417424 ERICH3Q5RHP9 1530 aa25.02■■□□□ 1.6
SGSM3-202ENST00000417424 FHAD1B1AJZ9 1412 aa25.02■■□□□ 1.6
SGSM3-202ENST00000417424 NUP160Q12769 1436 aa25.02■■□□□ 1.6
SGSM3-202ENST00000417424 ERCC6L2Q5T890 1561 aa24.97■■□□□ 1.59
SGSM3-202ENST00000417424 TRHP20396 242 aaPredicted RBP24.95■■□□□ 1.58
SGSM3-202ENST00000417424 SHROOM2Q13796 1616 aa24.9■■□□□ 1.58
SGSM3-202ENST00000417424 RUSC2Q8N2Y8 1516 aa24.8■■□□□ 1.56
SGSM3-202ENST00000417424 PRG4Q92954 1404 aaPredicted RBP24.74■■□□□ 1.55
SGSM3-202ENST00000417424 KIF27Q86VH2 1401 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms