RNA–Protein interactions for RNA: ENST00000417024.6

TMEM104-202, Transcript of transmembrane protein 104, humanhuman

TSL 2 BASIC

Gene TMEM104, Length 1,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104-202ENST00000417024 NISCHQ9Y2I1 1504 aa44.01■■■■■ 4.64
TMEM104-202ENST00000417024 CCDC180Q9P1Z9 1646 aa38.76■■■■□ 3.8
TMEM104-202ENST00000417024 ABCC9O60706 1549 aa37.17■■■■□ 3.54
TMEM104-202ENST00000417024 ZCCHC6Q5VYS8 1495 aaKnown RBP36.86■■■■□ 3.49
TMEM104-202ENST00000417024 DCAF8L2P0C7V8 631 aa36.48■■■■□ 3.43
TMEM104-202ENST00000417024 DCAF1Q9Y4B6 1507 aa36.44■■■■□ 3.42
TMEM104-202ENST00000417024 MYO15BQ96JP2 1530 aa36.28■■■■□ 3.4
TMEM104-202ENST00000417024 NACADO15069 1562 aa36.24■■■■□ 3.39
TMEM104-202ENST00000417024 RB1CC1Q8TDY2 1594 aa36.1■■■■□ 3.37
TMEM104-202ENST00000417024 SCRIBQ14160 1630 aa35.49■■■■□ 3.27
TMEM104-202ENST00000417024 SHROOM4Q9ULL8 1493 aa35.34■■■■□ 3.25
TMEM104-202ENST00000417024 UNC13AQ9UPW8 1703 aa35.29■■■■□ 3.24
TMEM104-202ENST00000417024 BICRAQ9NZM4 1560 aa34.96■■■■□ 3.19
TMEM104-202ENST00000417024 PABPN1Q86U42 306 aaKnown RBP eCLIP34.87■■■■□ 3.17
TMEM104-202ENST00000417024 CECR2Q9BXF3 1484 aa34.21■■■■□ 3.07
TMEM104-202ENST00000417024 BAZ1AQ9NRL2 1556 aaPredicted RBP34.08■■■■□ 3.05
TMEM104-202ENST00000417024 EIF4G1Q04637 1599 aaKnown RBP34■■■■□ 3.03
TMEM104-202ENST00000417024 SMARCA4P51532 1647 aa33.99■■■■□ 3.03
TMEM104-202ENST00000417024 MROH2BQ7Z745 1585 aa33.95■■■■□ 3.02
TMEM104-202ENST00000417024 RSF1Q96T23 1441 aaPredicted RBP33.84■■■■□ 3.01
TMEM104-202ENST00000417024 CC2D2AQ9P2K1 1620 aa33.66■■■□□ 2.98
TMEM104-202ENST00000417024 SUPT5HO00267 1087 aaKnown RBP33.65■■■□□ 2.98
TMEM104-202ENST00000417024 WIZO95785 1651 aa33.63■■■□□ 2.97
TMEM104-202ENST00000417024 PEG3Q9GZU2 1588 aa33.63■■■□□ 2.97
TMEM104-202ENST00000417024 SMARCA2P51531 1590 aa33.59■■■□□ 2.97
TMEM104-202ENST00000417024 ATAD2BQ9ULI0 1458 aa33.59■■■□□ 2.97
TMEM104-202ENST00000417024 NCAPD3P42695 1498 aa33.42■■■□□ 2.94
TMEM104-202ENST00000417024 BAZ1BQ9UIG0 1483 aaKnown RBP33.38■■■□□ 2.93
TMEM104-202ENST00000417024 HMGXB3Q12766 1538 aa33.36■■■□□ 2.93
TMEM104-202ENST00000417024 TOP2AP11388 1531 aaKnown RBP33.32■■■□□ 2.93
TMEM104-202ENST00000417024 DNAJC5BQ9UF47 199 aa33.32■■■□□ 2.92
TMEM104-202ENST00000417024 CCDC88BA6NC98 1476 aa32.91■■■□□ 2.86
TMEM104-202ENST00000417024 CADPSQ9ULU8 1353 aa32.51■■■□□ 2.79
TMEM104-202ENST00000417024 CFTRP13569 1480 aa32.49■■■□□ 2.79
TMEM104-202ENST00000417024 LAMC3Q9Y6N6 1575 aa32.44■■■□□ 2.78
TMEM104-202ENST00000417024 NESP48681 1621 aa32.41■■■□□ 2.78
TMEM104-202ENST00000417024 PRDM2Q13029 1718 aa32.32■■■□□ 2.76
TMEM104-202ENST00000417024 PDS5BQ9NTI5 1447 aa32.19■■■□□ 2.74
TMEM104-202ENST00000417024 FANCD2Q9BXW9 1451 aa32.16■■■□□ 2.74
TMEM104-202ENST00000417024 CEP164Q9UPV0 1460 aa32.05■■■□□ 2.72
TMEM104-202ENST00000417024 KIF21AQ7Z4S6 1674 aa32.05■■■□□ 2.72
TMEM104-202ENST00000417024 ABCC8Q09428 1581 aa32■■■□□ 2.71
TMEM104-202ENST00000417024 ERCC6Q03468 1493 aa32■■■□□ 2.71
TMEM104-202ENST00000417024 WRNQ14191 1432 aaPredicted RBP eCLIP31.92■■■□□ 2.7
TMEM104-202ENST00000417024 CHIC1Q5VXU3 224 aa31.84■■■□□ 2.69
TMEM104-202ENST00000417024 MRC2Q9UBG0 1479 aa31.82■■■□□ 2.68
TMEM104-202ENST00000417024 CUX1P39880 1505 aa31.8■■■□□ 2.68
TMEM104-202ENST00000417024 SYNJ1O43426 1573 aa31.8■■■□□ 2.68
TMEM104-202ENST00000417024 URB2Q14146 1524 aaKnown RBP31.78■■■□□ 2.68
TMEM104-202ENST00000417024 DNMBPQ6XZF7 1577 aa31.77■■■□□ 2.68
TMEM104-202ENST00000417024 TOP2BQ02880 1626 aa31.74■■■□□ 2.67
TMEM104-202ENST00000417024 THOC2Q8NI27 1593 aaKnown RBP31.74■■■□□ 2.67
TMEM104-202ENST00000417024 TOPBP1Q92547 1522 aa31.73■■■□□ 2.67
TMEM104-202ENST00000417024 TRIM41Q8WV44 630 aa31.73■■■□□ 2.67
TMEM104-202ENST00000417024 BIVM-ERCC5R4GMW8 1640 aa31.72■■■□□ 2.67
TMEM104-202ENST00000417024 WDR62O43379 1518 aa31.69■■■□□ 2.66
TMEM104-202ENST00000417024 FGD5Q6ZNL6 1462 aa31.57■■■□□ 2.64
TMEM104-202ENST00000417024 POLA1P09884 1462 aaPredicted RBP31.52■■■□□ 2.64
TMEM104-202ENST00000417024 SOGA1O94964 1423 aa31.4■■■□□ 2.62
TMEM104-202ENST00000417024 CUX2O14529 1486 aa31.39■■■□□ 2.62
TMEM104-202ENST00000417024 RAD54L2Q9Y4B4 1467 aa31.38■■■□□ 2.61
TMEM104-202ENST00000417024 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
TMEM104-202ENST00000417024 TARBP1Q13395 1621 aaKnown RBP31.31■■■□□ 2.6
TMEM104-202ENST00000417024 ABCA10Q8WWZ4 1543 aa31.29■■■□□ 2.6
TMEM104-202ENST00000417024 WDR97A6NE52 1622 aa31.26■■■□□ 2.6
TMEM104-202ENST00000417024 KIF27Q86VH2 1401 aa31.18■■■□□ 2.58
TMEM104-202ENST00000417024 RUSC2Q8N2Y8 1516 aa31.14■■■□□ 2.58
TMEM104-202ENST00000417024 ZNF608Q9ULD9 1512 aaPredicted RBP31.13■■■□□ 2.57
TMEM104-202ENST00000417024 EEA1Q15075 1411 aa31.13■■■□□ 2.57
TMEM104-202ENST00000417024 TDRD9Q8NDG6 1382 aaKnown RBP31.13■■■□□ 2.57
TMEM104-202ENST00000417024 ABCA5Q8WWZ7 1642 aa31.1■■■□□ 2.57
TMEM104-202ENST00000417024 FAM9AQ8IZU1 332 aaPredicted RBP31.07■■■□□ 2.56
TMEM104-202ENST00000417024 GAPVD1Q14C86 1478 aa31.06■■■□□ 2.56
TMEM104-202ENST00000417024 EIF4G3O43432 1585 aaKnown RBP31.06■■■□□ 2.56
TMEM104-202ENST00000417024 AQRO60306 1485 aaKnown RBP eCLIP31.05■■■□□ 2.569e-7■■■■■ 32.1
TMEM104-202ENST00000417024 PBRM1Q86U86 1689 aa30.95■■■□□ 2.54
TMEM104-202ENST00000417024 CSRNP3Q8WYN3 585 aa30.94■■■□□ 2.54
TMEM104-202ENST00000417024 ERICH3Q5RHP9 1530 aa30.93■■■□□ 2.54
TMEM104-202ENST00000417024 GRIN2BQ13224 1484 aa30.93■■■□□ 2.54
TMEM104-202ENST00000417024 IGF1RP08069 1367 aa30.91■■■□□ 2.54
TMEM104-202ENST00000417024 CUL7Q14999 1698 aa30.83■■■□□ 2.53
TMEM104-202ENST00000417024 SNAPC4Q5SXM2 1469 aa30.8■■■□□ 2.52
TMEM104-202ENST00000417024 MAGI1Q96QZ7 1491 aaPredicted RBP30.77■■■□□ 2.52
TMEM104-202ENST00000417024 PRXQ9BXM0 1461 aa30.77■■■□□ 2.52
TMEM104-202ENST00000417024 CARMIL1Q5VZK9 1371 aa30.77■■■□□ 2.52
TMEM104-202ENST00000417024 ADAMTS12P58397 1594 aa30.76■■■□□ 2.51
TMEM104-202ENST00000417024 KIF21BO75037 1637 aa30.74■■■□□ 2.51
TMEM104-202ENST00000417024 FHAD1B1AJZ9 1412 aa30.72■■■□□ 2.51
TMEM104-202ENST00000417024 RAPGEF2Q9Y4G8 1499 aa30.69■■■□□ 2.5
TMEM104-202ENST00000417024 GOLGA3Q08378 1498 aa30.65■■■□□ 2.5
TMEM104-202ENST00000417024 SYNJ2O15056 1496 aa30.64■■■□□ 2.5
TMEM104-202ENST00000417024 EHMT2Q96KQ7 1210 aa30.64■■■□□ 2.49
TMEM104-202ENST00000417024 CHMP7Q8WUX9 453 aaPredicted RBP30.56■■■□□ 2.48
TMEM104-202ENST00000417024 LOC105371045A0A1W2PR82 267 aa30.56■■■□□ 2.48
TMEM104-202ENST00000417024 GRIN2AQ12879 1464 aa30.55■■■□□ 2.48
TMEM104-202ENST00000417024 FBLN2P98095 1184 aa30.54■■■□□ 2.48
TMEM104-202ENST00000417024 CHD1O14646 1710 aa30.49■■■□□ 2.47
TMEM104-202ENST00000417024 UBTFP17480 764 aaKnown RBP30.49■■■□□ 2.47
TMEM104-202ENST00000417024 TNIKQ9UKE5 1360 aa30.38■■■□□ 2.45
TMEM104-202ENST00000417024 CEP170Q5SW79 1584 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms