RNA–Protein interactions for RNA: ENST00000416754.1

RUNX1-206, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-206ENST00000416754 AEBP2Q6ZN18 517 aaPredicted RBP24.12■■□□□ 1.45
RUNX1-206ENST00000416754 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
RUNX1-206ENST00000416754 NISCHQ9Y2I1 1504 aa22.65■■□□□ 1.22
RUNX1-206ENST00000416754 ABCC9O60706 1549 aa21.1■□□□□ 0.97
RUNX1-206ENST00000416754 DNAJC5BQ9UF47 199 aa20.38■□□□□ 0.85
RUNX1-206ENST00000416754 CCDC180Q9P1Z9 1646 aa20.37■□□□□ 0.85
RUNX1-206ENST00000416754 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
RUNX1-206ENST00000416754 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
RUNX1-206ENST00000416754 RB1CC1Q8TDY2 1594 aa19.7■□□□□ 0.74
RUNX1-206ENST00000416754 PABPN1Q86U42 306 aaKnown RBP eCLIP19.68■□□□□ 0.74
RUNX1-206ENST00000416754 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
RUNX1-206ENST00000416754 NACADO15069 1562 aa19.44■□□□□ 0.7
RUNX1-206ENST00000416754 UNC13AQ9UPW8 1703 aa19.25■□□□□ 0.67
RUNX1-206ENST00000416754 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
RUNX1-206ENST00000416754 FOXD1Q16676 465 aa19.09■□□□□ 0.65
RUNX1-206ENST00000416754 CECR2Q9BXF3 1484 aa19■□□□□ 0.63
RUNX1-206ENST00000416754 MYO15BQ96JP2 1530 aa18.97■□□□□ 0.63
RUNX1-206ENST00000416754 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
RUNX1-206ENST00000416754 DNAJC5Q9H3Z4 198 aa18.94■□□□□ 0.62
RUNX1-206ENST00000416754 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
RUNX1-206ENST00000416754 SHROOM4Q9ULL8 1493 aa18.73■□□□□ 0.59
RUNX1-206ENST00000416754 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
RUNX1-206ENST00000416754 ZCCHC6Q5VYS8 1495 aaKnown RBP18.64■□□□□ 0.57
RUNX1-206ENST00000416754 DCAF1Q9Y4B6 1507 aa18.57■□□□□ 0.56
RUNX1-206ENST00000416754 CUX2O14529 1486 aa18.23■□□□□ 0.51
RUNX1-206ENST00000416754 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
RUNX1-206ENST00000416754 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
RUNX1-206ENST00000416754 NCAPD3P42695 1498 aa18.03■□□□□ 0.48
RUNX1-206ENST00000416754 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
RUNX1-206ENST00000416754 NESP48681 1621 aa18.01■□□□□ 0.47
RUNX1-206ENST00000416754 TRIM41Q8WV44 630 aa17.98■□□□□ 0.47
RUNX1-206ENST00000416754 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
RUNX1-206ENST00000416754 ADRA2BP18089 450 aa17.9■□□□□ 0.46
RUNX1-206ENST00000416754 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
RUNX1-206ENST00000416754 HMGXB3Q12766 1538 aa17.77■□□□□ 0.43
RUNX1-206ENST00000416754 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
RUNX1-206ENST00000416754 SMARCA4P51532 1647 aa17.73■□□□□ 0.43
RUNX1-206ENST00000416754 PIAS4Q8N2W9 510 aaPredicted RBP17.72■□□□□ 0.43
RUNX1-206ENST00000416754 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
RUNX1-206ENST00000416754 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
RUNX1-206ENST00000416754 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
RUNX1-206ENST00000416754 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
RUNX1-206ENST00000416754 MSH5O43196 834 aa17.59■□□□□ 0.41
RUNX1-206ENST00000416754 BAZ1AQ9NRL2 1556 aaPredicted RBP17.55■□□□□ 0.4
RUNX1-206ENST00000416754 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.39
RUNX1-206ENST00000416754 PEG3Q9GZU2 1588 aa17.51■□□□□ 0.39
RUNX1-206ENST00000416754 CADPSQ9ULU8 1353 aa17.5■□□□□ 0.39
RUNX1-206ENST00000416754 MRC2Q9UBG0 1479 aa17.48■□□□□ 0.39
RUNX1-206ENST00000416754 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
RUNX1-206ENST00000416754 WDR62O43379 1518 aa17.42■□□□□ 0.38
RUNX1-206ENST00000416754 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
RUNX1-206ENST00000416754 FANCD2Q9BXW9 1451 aa17.29■□□□□ 0.36
RUNX1-206ENST00000416754 POTEDQ86YR6 584 aa17.28■□□□□ 0.36
RUNX1-206ENST00000416754 WIZO95785 1651 aa17.24■□□□□ 0.35
RUNX1-206ENST00000416754 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.34
RUNX1-206ENST00000416754 RIMBP3CA6NJZ7 1639 aa17.2■□□□□ 0.34
RUNX1-206ENST00000416754 RIMBP3BA6NNM3 1639 aa17.2■□□□□ 0.34
RUNX1-206ENST00000416754 RIMBP3Q9UFD9 1639 aa17.2■□□□□ 0.34
RUNX1-206ENST00000416754 CFTRP13569 1480 aa17.16■□□□□ 0.34
RUNX1-206ENST00000416754 CYB5RLQ6IPT4 315 aa17.15■□□□□ 0.34
RUNX1-206ENST00000416754 ARHGEF11O15085 1522 aa17.11■□□□□ 0.33
RUNX1-206ENST00000416754 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
RUNX1-206ENST00000416754 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
RUNX1-206ENST00000416754 RSF1Q96T23 1441 aaPredicted RBP16.98■□□□□ 0.31
RUNX1-206ENST00000416754 IFT140Q96RY7 1462 aa16.98■□□□□ 0.31
RUNX1-206ENST00000416754 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
RUNX1-206ENST00000416754 TOP2AP11388 1531 aaKnown RBP16.93■□□□□ 0.3
RUNX1-206ENST00000416754 FBLN2P98095 1184 aa16.93■□□□□ 0.3
RUNX1-206ENST00000416754 AQRO60306 1485 aaKnown RBP eCLIP16.91■□□□□ 0.3
RUNX1-206ENST00000416754 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
RUNX1-206ENST00000416754 EIF4G3O43432 1585 aaKnown RBP16.86■□□□□ 0.29
RUNX1-206ENST00000416754 CCDC88BA6NC98 1476 aa16.85■□□□□ 0.29
RUNX1-206ENST00000416754 CHD1O14646 1710 aa16.82■□□□□ 0.28
RUNX1-206ENST00000416754 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
RUNX1-206ENST00000416754 TARBP1Q13395 1621 aaKnown RBP16.75■□□□□ 0.27
RUNX1-206ENST00000416754 TDRD9Q8NDG6 1382 aaKnown RBP16.75■□□□□ 0.27
RUNX1-206ENST00000416754 RAD54L2Q9Y4B4 1467 aa16.73■□□□□ 0.27
RUNX1-206ENST00000416754 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
RUNX1-206ENST00000416754 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
RUNX1-206ENST00000416754 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
RUNX1-206ENST00000416754 CHMP7Q8WUX9 453 aaPredicted RBP16.67■□□□□ 0.26
RUNX1-206ENST00000416754 SOGA1O94964 1423 aa16.66■□□□□ 0.26
RUNX1-206ENST00000416754 SNAPC4Q5SXM2 1469 aa16.65■□□□□ 0.26
RUNX1-206ENST00000416754 CLASP1Q7Z460 1538 aa16.64■□□□□ 0.25
RUNX1-206ENST00000416754 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
RUNX1-206ENST00000416754 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
RUNX1-206ENST00000416754 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
RUNX1-206ENST00000416754 GRIN2BQ13224 1484 aa16.51■□□□□ 0.23
RUNX1-206ENST00000416754 MAGI1Q96QZ7 1491 aaPredicted RBP16.51■□□□□ 0.23
RUNX1-206ENST00000416754 SYNJ2O15056 1496 aa16.49■□□□□ 0.23
RUNX1-206ENST00000416754 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
RUNX1-206ENST00000416754 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
RUNX1-206ENST00000416754 CUX1P39880 1505 aa16.46■□□□□ 0.23
RUNX1-206ENST00000416754 WDR97A6NE52 1622 aa16.39■□□□□ 0.21
RUNX1-206ENST00000416754 PBRM1Q86U86 1689 aa16.32■□□□□ 0.2
RUNX1-206ENST00000416754 CEP170Q5SW79 1584 aa16.3■□□□□ 0.2
RUNX1-206ENST00000416754 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
RUNX1-206ENST00000416754 ILDR1Q86SU0 546 aaPredicted RBP16.29■□□□□ 0.2
RUNX1-206ENST00000416754 KDM4FA0A1W2PPD8 638 aa16.28■□□□□ 0.2
RUNX1-206ENST00000416754 ABCA10Q8WWZ4 1543 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms