RNA–Protein interactions for RNA: ENST00000416365.2

CDHR2-202, Transcript of cadherin related family member 2, humanhuman

TSL 3

Gene CDHR2, Length 488 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR2-202ENST00000416365 NISCHQ9Y2I1 1504 aa34.65■■■■□ 3.14
CDHR2-202ENST00000416365 CCDC180Q9P1Z9 1646 aa30.86■■■□□ 2.53
CDHR2-202ENST00000416365 ABCC9O60706 1549 aa30.13■■■□□ 2.41
CDHR2-202ENST00000416365 RB1CC1Q8TDY2 1594 aa29.03■■■□□ 2.24
CDHR2-202ENST00000416365 DCAF8L2P0C7V8 631 aa29.01■■■□□ 2.23
CDHR2-202ENST00000416365 NACADO15069 1562 aa28.96■■■□□ 2.23
CDHR2-202ENST00000416365 ZCCHC6Q5VYS8 1495 aaKnown RBP28.89■■■□□ 2.22
CDHR2-202ENST00000416365 MYO15BQ96JP2 1530 aa28.75■■■□□ 2.19
CDHR2-202ENST00000416365 DCAF1Q9Y4B6 1507 aa28.65■■■□□ 2.18
CDHR2-202ENST00000416365 UNC13AQ9UPW8 1703 aa28.36■■■□□ 2.13
CDHR2-202ENST00000416365 SCRIBQ14160 1630 aa28.18■■■□□ 2.1
CDHR2-202ENST00000416365 PABPN1Q86U42 306 aaKnown RBP eCLIP28.12■■■□□ 2.092e-7■■□□□ 12.3
CDHR2-202ENST00000416365 BICRAQ9NZM4 1560 aa28.05■■■□□ 2.08
CDHR2-202ENST00000416365 DNAJC5BQ9UF47 199 aa27.86■■■□□ 2.05
CDHR2-202ENST00000416365 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
CDHR2-202ENST00000416365 EIF4G1Q04637 1599 aaKnown RBP27.37■■□□□ 1.97
CDHR2-202ENST00000416365 CC2D2AQ9P2K1 1620 aa27.27■■□□□ 1.96
CDHR2-202ENST00000416365 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
CDHR2-202ENST00000416365 SMARCA4P51532 1647 aa26.92■■□□□ 1.9
CDHR2-202ENST00000416365 BAZ1AQ9NRL2 1556 aaPredicted RBP26.91■■□□□ 1.9
CDHR2-202ENST00000416365 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
CDHR2-202ENST00000416365 ATAD2BQ9ULI0 1458 aa26.71■■□□□ 1.87
CDHR2-202ENST00000416365 MROH2BQ7Z745 1585 aa26.7■■□□□ 1.86
CDHR2-202ENST00000416365 NCAPD3P42695 1498 aa26.67■■□□□ 1.86
CDHR2-202ENST00000416365 HMGXB3Q12766 1538 aa26.6■■□□□ 1.85
CDHR2-202ENST00000416365 PEG3Q9GZU2 1588 aa26.6■■□□□ 1.85
CDHR2-202ENST00000416365 BAZ1BQ9UIG0 1483 aaKnown RBP26.57■■□□□ 1.84
CDHR2-202ENST00000416365 WIZO95785 1651 aa26.46■■□□□ 1.83
CDHR2-202ENST00000416365 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.81
CDHR2-202ENST00000416365 TOP2AP11388 1531 aaKnown RBP26.19■■□□□ 1.78
CDHR2-202ENST00000416365 NESP48681 1621 aa26.05■■□□□ 1.76
CDHR2-202ENST00000416365 LAMC3Q9Y6N6 1575 aa26.04■■□□□ 1.76
CDHR2-202ENST00000416365 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
CDHR2-202ENST00000416365 CADPSQ9ULU8 1353 aa25.92■■□□□ 1.74
CDHR2-202ENST00000416365 CUX2O14529 1486 aa25.91■■□□□ 1.74
CDHR2-202ENST00000416365 PDS5BQ9NTI5 1447 aa25.86■■□□□ 1.73
CDHR2-202ENST00000416365 SUPT5HO00267 1087 aaKnown RBP25.84■■□□□ 1.73
CDHR2-202ENST00000416365 CCDC88BA6NC98 1476 aa25.83■■□□□ 1.73
CDHR2-202ENST00000416365 KIF21AQ7Z4S6 1674 aa25.82■■□□□ 1.72
CDHR2-202ENST00000416365 CFTRP13569 1480 aa25.77■■□□□ 1.72
CDHR2-202ENST00000416365 THOC2Q8NI27 1593 aaKnown RBP25.74■■□□□ 1.71
CDHR2-202ENST00000416365 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
CDHR2-202ENST00000416365 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
CDHR2-202ENST00000416365 CEP164Q9UPV0 1460 aa25.66■■□□□ 1.7
CDHR2-202ENST00000416365 MRC2Q9UBG0 1479 aa25.6■■□□□ 1.69
CDHR2-202ENST00000416365 WDR62O43379 1518 aa25.49■■□□□ 1.67
CDHR2-202ENST00000416365 DNAJC5Q9H3Z4 198 aa25.39■■□□□ 1.66
CDHR2-202ENST00000416365 URB2Q14146 1524 aaKnown RBP25.37■■□□□ 1.65
CDHR2-202ENST00000416365 ABCC8Q09428 1581 aa25.27■■□□□ 1.64
CDHR2-202ENST00000416365 TOPBP1Q92547 1522 aa25.25■■□□□ 1.63
CDHR2-202ENST00000416365 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
CDHR2-202ENST00000416365 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
CDHR2-202ENST00000416365 CUX1P39880 1505 aa25.07■■□□□ 1.6
CDHR2-202ENST00000416365 POLA1P09884 1462 aaPredicted RBP25.02■■□□□ 1.6
CDHR2-202ENST00000416365 FGD5Q6ZNL6 1462 aa25■■□□□ 1.59
CDHR2-202ENST00000416365 TARBP1Q13395 1621 aaKnown RBP24.95■■□□□ 1.58
CDHR2-202ENST00000416365 WRNQ14191 1432 aaPredicted RBP eCLIP24.95■■□□□ 1.58
CDHR2-202ENST00000416365 ZNF608Q9ULD9 1512 aaPredicted RBP24.94■■□□□ 1.58
CDHR2-202ENST00000416365 SOGA1O94964 1423 aa24.94■■□□□ 1.58
CDHR2-202ENST00000416365 EIF4G3O43432 1585 aaKnown RBP24.92■■□□□ 1.58
CDHR2-202ENST00000416365 RAD54L2Q9Y4B4 1467 aa24.91■■□□□ 1.58
CDHR2-202ENST00000416365 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
CDHR2-202ENST00000416365 TOP2BQ02880 1626 aa24.88■■□□□ 1.57
CDHR2-202ENST00000416365 SYNJ1O43426 1573 aa24.87■■□□□ 1.57
CDHR2-202ENST00000416365 WDR97A6NE52 1622 aa24.81■■□□□ 1.56
CDHR2-202ENST00000416365 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.56
CDHR2-202ENST00000416365 TDRD9Q8NDG6 1382 aaKnown RBP24.77■■□□□ 1.56
CDHR2-202ENST00000416365 ABCA10Q8WWZ4 1543 aa24.73■■□□□ 1.55
CDHR2-202ENST00000416365 PBRM1Q86U86 1689 aa24.68■■□□□ 1.54
CDHR2-202ENST00000416365 GAPVD1Q14C86 1478 aa24.66■■□□□ 1.54
CDHR2-202ENST00000416365 ABCA5Q8WWZ7 1642 aa24.66■■□□□ 1.54
CDHR2-202ENST00000416365 GRIN2BQ13224 1484 aa24.65■■□□□ 1.54
CDHR2-202ENST00000416365 OSCARQ8IYS5 282 aa24.65■■□□□ 1.54
CDHR2-202ENST00000416365 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.53
CDHR2-202ENST00000416365 CHD1O14646 1710 aa24.61■■□□□ 1.53
CDHR2-202ENST00000416365 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
CDHR2-202ENST00000416365 FBLN2P98095 1184 aa24.58■■□□□ 1.53
CDHR2-202ENST00000416365 CHMP7Q8WUX9 453 aaPredicted RBP24.49■■□□□ 1.51
CDHR2-202ENST00000416365 SYNJ2O15056 1496 aa24.49■■□□□ 1.51
CDHR2-202ENST00000416365 ERICH3Q5RHP9 1530 aa24.46■■□□□ 1.51
CDHR2-202ENST00000416365 ADAMTS12P58397 1594 aa24.44■■□□□ 1.5
CDHR2-202ENST00000416365 KIF27Q86VH2 1401 aa24.43■■□□□ 1.5
CDHR2-202ENST00000416365 RIMBP3CA6NJZ7 1639 aa24.39■■□□□ 1.5
CDHR2-202ENST00000416365 RIMBP3BA6NNM3 1639 aa24.39■■□□□ 1.5
CDHR2-202ENST00000416365 RIMBP3Q9UFD9 1639 aa24.39■■□□□ 1.5
CDHR2-202ENST00000416365 TRIM41Q8WV44 630 aa24.39■■□□□ 1.49
CDHR2-202ENST00000416365 FHAD1B1AJZ9 1412 aa24.37■■□□□ 1.49
CDHR2-202ENST00000416365 ARHGEF11O15085 1522 aa24.35■■□□□ 1.49
CDHR2-202ENST00000416365 GRIN2AQ12879 1464 aa24.33■■□□□ 1.49
CDHR2-202ENST00000416365 CUL7Q14999 1698 aa24.3■■□□□ 1.48
CDHR2-202ENST00000416365 CLASP1Q7Z460 1538 aa24.27■■□□□ 1.48
CDHR2-202ENST00000416365 IGF1RP08069 1367 aa24.23■■□□□ 1.47
CDHR2-202ENST00000416365 CEP170Q5SW79 1584 aa24.21■■□□□ 1.47
CDHR2-202ENST00000416365 NUP160Q12769 1436 aa24.18■■□□□ 1.46
CDHR2-202ENST00000416365 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
CDHR2-202ENST00000416365 CARMIL1Q5VZK9 1371 aa24.15■■□□□ 1.46
CDHR2-202ENST00000416365 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
CDHR2-202ENST00000416365 CHIC1Q5VXU3 224 aa24.04■■□□□ 1.44
CDHR2-202ENST00000416365 RAPGEF2Q9Y4G8 1499 aa24.04■■□□□ 1.44
CDHR2-202ENST00000416365 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 448.7 ms