RNA–Protein interactions for RNA: ENST00000416177.1

ABCB1-202, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5

Gene ABCB1, Length 461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-202ENST00000416177 NISCHQ9Y2I1 1504 aa25.33■■□□□ 1.65
ABCB1-202ENST00000416177 AEBP2Q6ZN18 517 aaPredicted RBP24.85■■□□□ 1.57
ABCB1-202ENST00000416177 CHIC1Q5VXU3 224 aa23.7■■□□□ 1.38
ABCB1-202ENST00000416177 CCDC180Q9P1Z9 1646 aa22.75■■□□□ 1.23
ABCB1-202ENST00000416177 ABCC9O60706 1549 aa22.36■■□□□ 1.17
ABCB1-202ENST00000416177 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
ABCB1-202ENST00000416177 NACADO15069 1562 aa21.45■■□□□ 1.02
ABCB1-202ENST00000416177 MYO15BQ96JP2 1530 aa21.29■■□□□ 1
ABCB1-202ENST00000416177 DCAF8L2P0C7V8 631 aa21.17■□□□□ 0.98
ABCB1-202ENST00000416177 SENP3Q9H4L4 574 aaPredicted RBP21.08■□□□□ 0.97
ABCB1-202ENST00000416177 ZCCHC6Q5VYS8 1495 aaKnown RBP21.05■□□□□ 0.96
ABCB1-202ENST00000416177 DCAF1Q9Y4B6 1507 aa21.04■□□□□ 0.96
ABCB1-202ENST00000416177 UNC13AQ9UPW8 1703 aa20.97■□□□□ 0.95
ABCB1-202ENST00000416177 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
ABCB1-202ENST00000416177 PABPN1Q86U42 306 aaKnown RBP eCLIP20.8■□□□□ 0.92
ABCB1-202ENST00000416177 BICRAQ9NZM4 1560 aa20.8■□□□□ 0.92
ABCB1-202ENST00000416177 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
ABCB1-202ENST00000416177 DNAJC5BQ9UF47 199 aa20.73■□□□□ 0.91
ABCB1-202ENST00000416177 SCRIBQ14160 1630 aa20.57■□□□□ 0.88
ABCB1-202ENST00000416177 EIF4G1Q04637 1599 aaKnown RBP20.31■□□□□ 0.84
ABCB1-202ENST00000416177 CC2D2AQ9P2K1 1620 aa20.28■□□□□ 0.84
ABCB1-202ENST00000416177 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
ABCB1-202ENST00000416177 NCAPD3P42695 1498 aa19.76■□□□□ 0.75
ABCB1-202ENST00000416177 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
ABCB1-202ENST00000416177 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
ABCB1-202ENST00000416177 BAZ1AQ9NRL2 1556 aaPredicted RBP19.7■□□□□ 0.74
ABCB1-202ENST00000416177 FOXD1Q16676 465 aa19.69■□□□□ 0.74
ABCB1-202ENST00000416177 ATAD2BQ9ULI0 1458 aa19.67■□□□□ 0.74
ABCB1-202ENST00000416177 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
ABCB1-202ENST00000416177 PEG3Q9GZU2 1588 aa19.6■□□□□ 0.73
ABCB1-202ENST00000416177 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
ABCB1-202ENST00000416177 MROH2BQ7Z745 1585 aa19.45■□□□□ 0.7
ABCB1-202ENST00000416177 ERCC6Q03468 1493 aa19.38■□□□□ 0.69
ABCB1-202ENST00000416177 CUX2O14529 1486 aa19.36■□□□□ 0.69
ABCB1-202ENST00000416177 LAMC3Q9Y6N6 1575 aa19.32■□□□□ 0.68
ABCB1-202ENST00000416177 NESP48681 1621 aa19.25■□□□□ 0.67
ABCB1-202ENST00000416177 WIZO95785 1651 aa19.23■□□□□ 0.67
ABCB1-202ENST00000416177 PDS5BQ9NTI5 1447 aa19.19■□□□□ 0.66
ABCB1-202ENST00000416177 CADPSQ9ULU8 1353 aa19.15■□□□□ 0.66
ABCB1-202ENST00000416177 RSF1Q96T23 1441 aaPredicted RBP19.15■□□□□ 0.66
ABCB1-202ENST00000416177 THOC2Q8NI27 1593 aaKnown RBP19.11■□□□□ 0.65
ABCB1-202ENST00000416177 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
ABCB1-202ENST00000416177 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.64
ABCB1-202ENST00000416177 DNAJC5Q9H3Z4 198 aa19.04■□□□□ 0.64
ABCB1-202ENST00000416177 PLPPR3Q6T4P5 718 aa18.98■□□□□ 0.63
ABCB1-202ENST00000416177 CFTRP13569 1480 aa18.97■□□□□ 0.63
ABCB1-202ENST00000416177 MRC2Q9UBG0 1479 aa18.97■□□□□ 0.63
ABCB1-202ENST00000416177 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
ABCB1-202ENST00000416177 WDR62O43379 1518 aa18.93■□□□□ 0.62
ABCB1-202ENST00000416177 FANCD2Q9BXW9 1451 aa18.9■□□□□ 0.62
ABCB1-202ENST00000416177 PRDM2Q13029 1718 aa18.87■□□□□ 0.61
ABCB1-202ENST00000416177 CCDC88BA6NC98 1476 aa18.8■□□□□ 0.6
ABCB1-202ENST00000416177 URB2Q14146 1524 aaKnown RBP18.69■□□□□ 0.58
ABCB1-202ENST00000416177 ABCC8Q09428 1581 aa18.68■□□□□ 0.58
ABCB1-202ENST00000416177 PPP6R1Q9UPN7 881 aa18.58■□□□□ 0.56
ABCB1-202ENST00000416177 IFT140Q96RY7 1462 aa18.58■□□□□ 0.56
ABCB1-202ENST00000416177 TOPBP1Q92547 1522 aa18.56■□□□□ 0.56
ABCB1-202ENST00000416177 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
ABCB1-202ENST00000416177 ADRA2BP18089 450 aa18.51■□□□□ 0.55
ABCB1-202ENST00000416177 OSCARQ8IYS5 282 aa18.46■□□□□ 0.55
ABCB1-202ENST00000416177 ZNF608Q9ULD9 1512 aaPredicted RBP18.39■□□□□ 0.54
ABCB1-202ENST00000416177 TARBP1Q13395 1621 aaKnown RBP18.39■□□□□ 0.53
ABCB1-202ENST00000416177 PIAS4Q8N2W9 510 aaPredicted RBP18.39■□□□□ 0.53
ABCB1-202ENST00000416177 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
ABCB1-202ENST00000416177 POLA1P09884 1462 aaPredicted RBP18.38■□□□□ 0.53
ABCB1-202ENST00000416177 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
ABCB1-202ENST00000416177 SUPT5HO00267 1087 aaKnown RBP18.34■□□□□ 0.53
ABCB1-202ENST00000416177 SOGA1O94964 1423 aa18.31■□□□□ 0.52
ABCB1-202ENST00000416177 MSH5O43196 834 aa18.3■□□□□ 0.52
ABCB1-202ENST00000416177 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
ABCB1-202ENST00000416177 CUX1P39880 1505 aa18.28■□□□□ 0.52
ABCB1-202ENST00000416177 AQRO60306 1485 aaKnown RBP eCLIP18.27■□□□□ 0.52
ABCB1-202ENST00000416177 RAD54L2Q9Y4B4 1467 aa18.24■□□□□ 0.51
ABCB1-202ENST00000416177 CHD1O14646 1710 aa18.2■□□□□ 0.5
ABCB1-202ENST00000416177 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
ABCB1-202ENST00000416177 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
ABCB1-202ENST00000416177 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
ABCB1-202ENST00000416177 GRIN2BQ13224 1484 aa18.16■□□□□ 0.5
ABCB1-202ENST00000416177 RIMBP3CA6NJZ7 1639 aa18.15■□□□□ 0.5
ABCB1-202ENST00000416177 RIMBP3BA6NNM3 1639 aa18.15■□□□□ 0.5
ABCB1-202ENST00000416177 RIMBP3Q9UFD9 1639 aa18.15■□□□□ 0.5
ABCB1-202ENST00000416177 ABCA10Q8WWZ4 1543 aa18.14■□□□□ 0.49
ABCB1-202ENST00000416177 SNAPC4Q5SXM2 1469 aa18.13■□□□□ 0.49
ABCB1-202ENST00000416177 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
ABCB1-202ENST00000416177 BIVM-ERCC5R4GMW8 1640 aa18.12■□□□□ 0.49
ABCB1-202ENST00000416177 WRNQ14191 1432 aaPredicted RBP eCLIP18.11■□□□□ 0.49
ABCB1-202ENST00000416177 GAPVD1Q14C86 1478 aa18.11■□□□□ 0.49
ABCB1-202ENST00000416177 TOP2BQ02880 1626 aa18.11■□□□□ 0.49
ABCB1-202ENST00000416177 FBLN2P98095 1184 aa18.1■□□□□ 0.49
ABCB1-202ENST00000416177 PBRM1Q86U86 1689 aa18.09■□□□□ 0.49
ABCB1-202ENST00000416177 SYNJ2O15056 1496 aa18.08■□□□□ 0.49
ABCB1-202ENST00000416177 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
ABCB1-202ENST00000416177 ABCA5Q8WWZ7 1642 aa18.08■□□□□ 0.48
ABCB1-202ENST00000416177 SYNJ1O43426 1573 aa18.08■□□□□ 0.48
ABCB1-202ENST00000416177 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.47
ABCB1-202ENST00000416177 ERICH3Q5RHP9 1530 aa17.95■□□□□ 0.46
ABCB1-202ENST00000416177 ADAMTS12P58397 1594 aa17.93■□□□□ 0.46
ABCB1-202ENST00000416177 ARAP1Q96P48 1450 aa17.93■□□□□ 0.46
ABCB1-202ENST00000416177 CYB5RLQ6IPT4 315 aa17.92■□□□□ 0.46
ABCB1-202ENST00000416177 FHAD1B1AJZ9 1412 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms