RNA–Protein interactions for RNA: ENST00000415557.1

ACTA2-202, Transcript of actin, alpha 2, smooth muscle, aorta, humanhuman

TSL 3

Gene ACTA2, Length 878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA2-202ENST00000415557 NISCHQ9Y2I1 1504 aa36.18■■■■□ 3.38
ACTA2-202ENST00000415557 CCDC180Q9P1Z9 1646 aa31.9■■■□□ 2.7
ACTA2-202ENST00000415557 ABCC9O60706 1549 aa30.79■■■□□ 2.52
ACTA2-202ENST00000415557 ZCCHC6Q5VYS8 1495 aaKnown RBP30.21■■■□□ 2.43
ACTA2-202ENST00000415557 DCAF8L2P0C7V8 631 aa30.16■■■□□ 2.42
ACTA2-202ENST00000415557 DCAF1Q9Y4B6 1507 aa29.91■■■□□ 2.38
ACTA2-202ENST00000415557 NACADO15069 1562 aa29.89■■■□□ 2.38
ACTA2-202ENST00000415557 MYO15BQ96JP2 1530 aa29.82■■■□□ 2.36
ACTA2-202ENST00000415557 RB1CC1Q8TDY2 1594 aa29.81■■■□□ 2.36
ACTA2-202ENST00000415557 SCRIBQ14160 1630 aa29.2■■■□□ 2.27
ACTA2-202ENST00000415557 UNC13AQ9UPW8 1703 aa29.16■■■□□ 2.26
ACTA2-202ENST00000415557 SHROOM4Q9ULL8 1493 aa28.99■■■□□ 2.23
ACTA2-202ENST00000415557 PABPN1Q86U42 306 aaKnown RBP eCLIP28.91■■■□□ 2.22
ACTA2-202ENST00000415557 BICRAQ9NZM4 1560 aa28.88■■■□□ 2.21
ACTA2-202ENST00000415557 DNAJC5BQ9UF47 199 aa28.68■■■□□ 2.18
ACTA2-202ENST00000415557 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
ACTA2-202ENST00000415557 EIF4G1Q04637 1599 aaKnown RBP28.07■■■□□ 2.08
ACTA2-202ENST00000415557 BAZ1AQ9NRL2 1556 aaPredicted RBP27.99■■■□□ 2.07
ACTA2-202ENST00000415557 SMARCA4P51532 1647 aa27.96■■■□□ 2.07
ACTA2-202ENST00000415557 MROH2BQ7Z745 1585 aa27.9■■■□□ 2.06
ACTA2-202ENST00000415557 CC2D2AQ9P2K1 1620 aa27.85■■■□□ 2.05
ACTA2-202ENST00000415557 RSF1Q96T23 1441 aaPredicted RBP27.77■■■□□ 2.04
ACTA2-202ENST00000415557 ATAD2BQ9ULI0 1458 aa27.68■■■□□ 2.02
ACTA2-202ENST00000415557 SMARCA2P51531 1590 aa27.66■■■□□ 2.02
ACTA2-202ENST00000415557 WIZO95785 1651 aa27.65■■■□□ 2.02
ACTA2-202ENST00000415557 PEG3Q9GZU2 1588 aa27.64■■■□□ 2.01
ACTA2-202ENST00000415557 NCAPD3P42695 1498 aa27.57■■■□□ 2
ACTA2-202ENST00000415557 SUPT5HO00267 1087 aaKnown RBP27.56■■■□□ 2
ACTA2-202ENST00000415557 BAZ1BQ9UIG0 1483 aaKnown RBP27.49■■□□□ 1.99
ACTA2-202ENST00000415557 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
ACTA2-202ENST00000415557 TOP2AP11388 1531 aaKnown RBP27.34■■□□□ 1.97
ACTA2-202ENST00000415557 CCDC88BA6NC98 1476 aa27.06■■□□□ 1.92
ACTA2-202ENST00000415557 CADPSQ9ULU8 1353 aa26.82■■□□□ 1.88
ACTA2-202ENST00000415557 NESP48681 1621 aa26.79■■□□□ 1.88
ACTA2-202ENST00000415557 LAMC3Q9Y6N6 1575 aa26.76■■□□□ 1.87
ACTA2-202ENST00000415557 CFTRP13569 1480 aa26.75■■□□□ 1.87
ACTA2-202ENST00000415557 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
ACTA2-202ENST00000415557 PRDM2Q13029 1718 aa26.59■■□□□ 1.85
ACTA2-202ENST00000415557 PDS5BQ9NTI5 1447 aa26.59■■□□□ 1.85
ACTA2-202ENST00000415557 FANCD2Q9BXW9 1451 aa26.51■■□□□ 1.83
ACTA2-202ENST00000415557 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
ACTA2-202ENST00000415557 KIF21AQ7Z4S6 1674 aa26.49■■□□□ 1.83
ACTA2-202ENST00000415557 CEP164Q9UPV0 1460 aa26.42■■□□□ 1.82
ACTA2-202ENST00000415557 MRC2Q9UBG0 1479 aa26.27■■□□□ 1.8
ACTA2-202ENST00000415557 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
ACTA2-202ENST00000415557 THOC2Q8NI27 1593 aaKnown RBP26.23■■□□□ 1.79
ACTA2-202ENST00000415557 URB2Q14146 1524 aaKnown RBP26.21■■□□□ 1.79
ACTA2-202ENST00000415557 WRNQ14191 1432 aaPredicted RBP eCLIP26.17■■□□□ 1.78
ACTA2-202ENST00000415557 DNMBPQ6XZF7 1577 aa26.15■■□□□ 1.78
ACTA2-202ENST00000415557 WDR62O43379 1518 aa26.14■■□□□ 1.78
ACTA2-202ENST00000415557 CUX1P39880 1505 aa26.14■■□□□ 1.78
ACTA2-202ENST00000415557 TOPBP1Q92547 1522 aa26.14■■□□□ 1.78
ACTA2-202ENST00000415557 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
ACTA2-202ENST00000415557 TOP2BQ02880 1626 aa26.04■■□□□ 1.76
ACTA2-202ENST00000415557 BIVM-ERCC5R4GMW8 1640 aa26.03■■□□□ 1.76
ACTA2-202ENST00000415557 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
ACTA2-202ENST00000415557 TRIM41Q8WV44 630 aa25.99■■□□□ 1.75
ACTA2-202ENST00000415557 CUX2O14529 1486 aa25.98■■□□□ 1.75
ACTA2-202ENST00000415557 FGD5Q6ZNL6 1462 aa25.98■■□□□ 1.75
ACTA2-202ENST00000415557 POLA1P09884 1462 aaPredicted RBP25.95■■□□□ 1.74
ACTA2-202ENST00000415557 SOGA1O94964 1423 aa25.89■■□□□ 1.74
ACTA2-202ENST00000415557 RAD54L2Q9Y4B4 1467 aa25.86■■□□□ 1.73
ACTA2-202ENST00000415557 IFT140Q96RY7 1462 aa25.84■■□□□ 1.73
ACTA2-202ENST00000415557 TARBP1Q13395 1621 aaKnown RBP25.81■■□□□ 1.72
ACTA2-202ENST00000415557 ABCA10Q8WWZ4 1543 aa25.73■■□□□ 1.71
ACTA2-202ENST00000415557 WDR97A6NE52 1622 aa25.7■■□□□ 1.71
ACTA2-202ENST00000415557 ZNF608Q9ULD9 1512 aaPredicted RBP25.7■■□□□ 1.7
ACTA2-202ENST00000415557 TDRD9Q8NDG6 1382 aaKnown RBP25.69■■□□□ 1.7
ACTA2-202ENST00000415557 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.7
ACTA2-202ENST00000415557 EIF4G3O43432 1585 aaKnown RBP25.6■■□□□ 1.69
ACTA2-202ENST00000415557 KIF27Q86VH2 1401 aa25.59■■□□□ 1.69
ACTA2-202ENST00000415557 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
ACTA2-202ENST00000415557 ABCA5Q8WWZ7 1642 aa25.57■■□□□ 1.68
ACTA2-202ENST00000415557 RUSC2Q8N2Y8 1516 aa25.55■■□□□ 1.68
ACTA2-202ENST00000415557 GRIN2BQ13224 1484 aa25.5■■□□□ 1.67
ACTA2-202ENST00000415557 PBRM1Q86U86 1689 aa25.49■■□□□ 1.67
ACTA2-202ENST00000415557 FAM9AQ8IZU1 332 aaPredicted RBP25.48■■□□□ 1.67
ACTA2-202ENST00000415557 IGF1RP08069 1367 aa25.44■■□□□ 1.66
ACTA2-202ENST00000415557 EEA1Q15075 1411 aa25.43■■□□□ 1.66
ACTA2-202ENST00000415557 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
ACTA2-202ENST00000415557 CSRNP3Q8WYN3 585 aa25.39■■□□□ 1.66
ACTA2-202ENST00000415557 SNAPC4Q5SXM2 1469 aa25.39■■□□□ 1.65
ACTA2-202ENST00000415557 MAGI1Q96QZ7 1491 aaPredicted RBP25.35■■□□□ 1.65
ACTA2-202ENST00000415557 CARMIL1Q5VZK9 1371 aa25.31■■□□□ 1.64
ACTA2-202ENST00000415557 CUL7Q14999 1698 aa25.3■■□□□ 1.64
ACTA2-202ENST00000415557 FBLN2P98095 1184 aa25.3■■□□□ 1.64
ACTA2-202ENST00000415557 FHAD1B1AJZ9 1412 aa25.29■■□□□ 1.64
ACTA2-202ENST00000415557 ADAMTS12P58397 1594 aa25.29■■□□□ 1.64
ACTA2-202ENST00000415557 CHMP7Q8WUX9 453 aaPredicted RBP25.28■■□□□ 1.64
ACTA2-202ENST00000415557 SYNJ2O15056 1496 aa25.26■■□□□ 1.63
ACTA2-202ENST00000415557 CHD1O14646 1710 aa25.21■■□□□ 1.63
ACTA2-202ENST00000415557 PRXQ9BXM0 1461 aa25.21■■□□□ 1.63
ACTA2-202ENST00000415557 RAPGEF2Q9Y4G8 1499 aa25.19■■□□□ 1.62
ACTA2-202ENST00000415557 GRIN2AQ12879 1464 aa25.16■■□□□ 1.62
ACTA2-202ENST00000415557 EHMT2Q96KQ7 1210 aa25.13■■□□□ 1.61
ACTA2-202ENST00000415557 KIF21BO75037 1637 aa25.12■■□□□ 1.61
ACTA2-202ENST00000415557 OSCARQ8IYS5 282 aa25.08■■□□□ 1.61
ACTA2-202ENST00000415557 GOLGA3Q08378 1498 aa25.03■■□□□ 1.6
ACTA2-202ENST00000415557 CEP170Q5SW79 1584 aa25.02■■□□□ 1.6
ACTA2-202ENST00000415557 UBTFP17480 764 aaKnown RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms