RNA–Protein interactions for RNA: ENST00000415251.6

PHTF2-204, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 1,738 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-204ENST00000415251 NISCHQ9Y2I1 1504 aa32.42■■■□□ 2.78
PHTF2-204ENST00000415251 CCDC180Q9P1Z9 1646 aa28.49■■■□□ 2.15
PHTF2-204ENST00000415251 ABCC9O60706 1549 aa27.66■■■□□ 2.02
PHTF2-204ENST00000415251 DCAF8L2P0C7V8 631 aa27.12■■□□□ 1.93
PHTF2-204ENST00000415251 ZCCHC6Q5VYS8 1495 aaKnown RBP27.07■■□□□ 1.92
PHTF2-204ENST00000415251 DCAF1Q9Y4B6 1507 aa26.74■■□□□ 1.87
PHTF2-204ENST00000415251 NACADO15069 1562 aa26.73■■□□□ 1.87
PHTF2-204ENST00000415251 MYO15BQ96JP2 1530 aa26.66■■□□□ 1.86
PHTF2-204ENST00000415251 RB1CC1Q8TDY2 1594 aa26.66■■□□□ 1.86
PHTF2-204ENST00000415251 SCRIBQ14160 1630 aa26.19■■□□□ 1.78
PHTF2-204ENST00000415251 UNC13AQ9UPW8 1703 aa26.12■■□□□ 1.77
PHTF2-204ENST00000415251 SHROOM4Q9ULL8 1493 aa26.08■■□□□ 1.77
PHTF2-204ENST00000415251 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.75
PHTF2-204ENST00000415251 BICRAQ9NZM4 1560 aa25.91■■□□□ 1.74
PHTF2-204ENST00000415251 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
PHTF2-204ENST00000415251 EIF4G1Q04637 1599 aaKnown RBP25.17■■□□□ 1.62
PHTF2-204ENST00000415251 DNAJC5BQ9UF47 199 aa25.09■■□□□ 1.61
PHTF2-204ENST00000415251 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
PHTF2-204ENST00000415251 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
PHTF2-204ENST00000415251 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
PHTF2-204ENST00000415251 CC2D2AQ9P2K1 1620 aa24.98■■□□□ 1.59
PHTF2-204ENST00000415251 RSF1Q96T23 1441 aaPredicted RBP24.92■■□□□ 1.58
PHTF2-204ENST00000415251 ATAD2BQ9ULI0 1458 aa24.82■■□□□ 1.56
PHTF2-204ENST00000415251 WIZO95785 1651 aa24.8■■□□□ 1.56
PHTF2-204ENST00000415251 SUPT5HO00267 1087 aaKnown RBP24.78■■□□□ 1.56
PHTF2-204ENST00000415251 SMARCA2P51531 1590 aa24.74■■□□□ 1.55
PHTF2-204ENST00000415251 PEG3Q9GZU2 1588 aa24.73■■□□□ 1.55
PHTF2-204ENST00000415251 NCAPD3P42695 1498 aa24.71■■□□□ 1.55
PHTF2-204ENST00000415251 BAZ1BQ9UIG0 1483 aaKnown RBP24.62■■□□□ 1.53
PHTF2-204ENST00000415251 HMGXB3Q12766 1538 aa24.57■■□□□ 1.52
PHTF2-204ENST00000415251 TOP2AP11388 1531 aaKnown RBP24.47■■□□□ 1.51
PHTF2-204ENST00000415251 CCDC88BA6NC98 1476 aa24.27■■□□□ 1.48
PHTF2-204ENST00000415251 NESP48681 1621 aa24.08■■□□□ 1.45
PHTF2-204ENST00000415251 CADPSQ9ULU8 1353 aa24.05■■□□□ 1.44
PHTF2-204ENST00000415251 CFTRP13569 1480 aa23.98■■□□□ 1.43
PHTF2-204ENST00000415251 LAMC3Q9Y6N6 1575 aa23.94■■□□□ 1.42
PHTF2-204ENST00000415251 PDS5BQ9NTI5 1447 aa23.8■■□□□ 1.4
PHTF2-204ENST00000415251 FANCD2Q9BXW9 1451 aa23.77■■□□□ 1.4
PHTF2-204ENST00000415251 ERCC6Q03468 1493 aa23.74■■□□□ 1.39
PHTF2-204ENST00000415251 PRDM2Q13029 1718 aa23.74■■□□□ 1.39
PHTF2-204ENST00000415251 KIF21AQ7Z4S6 1674 aa23.73■■□□□ 1.39
PHTF2-204ENST00000415251 CEP164Q9UPV0 1460 aa23.66■■□□□ 1.38
PHTF2-204ENST00000415251 ABCC8Q09428 1581 aa23.56■■□□□ 1.36
PHTF2-204ENST00000415251 MRC2Q9UBG0 1479 aa23.52■■□□□ 1.36
PHTF2-204ENST00000415251 URB2Q14146 1524 aaKnown RBP23.52■■□□□ 1.36
PHTF2-204ENST00000415251 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
PHTF2-204ENST00000415251 WRNQ14191 1432 aaPredicted RBP eCLIP23.46■■□□□ 1.35
PHTF2-204ENST00000415251 CUX1P39880 1505 aa23.45■■□□□ 1.34
PHTF2-204ENST00000415251 TOPBP1Q92547 1522 aa23.44■■□□□ 1.34
PHTF2-204ENST00000415251 WDR62O43379 1518 aa23.41■■□□□ 1.34
PHTF2-204ENST00000415251 DNMBPQ6XZF7 1577 aa23.4■■□□□ 1.34
PHTF2-204ENST00000415251 SYNJ1O43426 1573 aa23.38■■□□□ 1.33
PHTF2-204ENST00000415251 CHIC1Q5VXU3 224 aa23.35■■□□□ 1.33
PHTF2-204ENST00000415251 TOP2BQ02880 1626 aa23.31■■□□□ 1.32
PHTF2-204ENST00000415251 TRIM41Q8WV44 630 aa23.3■■□□□ 1.32
PHTF2-204ENST00000415251 FGD5Q6ZNL6 1462 aa23.29■■□□□ 1.32
PHTF2-204ENST00000415251 POLA1P09884 1462 aaPredicted RBP23.28■■□□□ 1.32
PHTF2-204ENST00000415251 BIVM-ERCC5R4GMW8 1640 aa23.28■■□□□ 1.32
PHTF2-204ENST00000415251 CUX2O14529 1486 aa23.26■■□□□ 1.31
PHTF2-204ENST00000415251 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
PHTF2-204ENST00000415251 SOGA1O94964 1423 aa23.21■■□□□ 1.31
PHTF2-204ENST00000415251 IFT140Q96RY7 1462 aa23.13■■□□□ 1.29
PHTF2-204ENST00000415251 TARBP1Q13395 1621 aaKnown RBP23.13■■□□□ 1.29
PHTF2-204ENST00000415251 ZNF608Q9ULD9 1512 aaPredicted RBP23.09■■□□□ 1.29
PHTF2-204ENST00000415251 TDRD9Q8NDG6 1382 aaKnown RBP23.08■■□□□ 1.29
PHTF2-204ENST00000415251 ABCA10Q8WWZ4 1543 aa23.05■■□□□ 1.28
PHTF2-204ENST00000415251 AQRO60306 1485 aaKnown RBP eCLIP23.05■■□□□ 1.283e-7■■■■■ 36.6
PHTF2-204ENST00000415251 WDR97A6NE52 1622 aa23■■□□□ 1.27
PHTF2-204ENST00000415251 RUSC2Q8N2Y8 1516 aa22.98■■□□□ 1.27
PHTF2-204ENST00000415251 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
PHTF2-204ENST00000415251 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
PHTF2-204ENST00000415251 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
PHTF2-204ENST00000415251 KIF27Q86VH2 1401 aa22.91■■□□□ 1.26
PHTF2-204ENST00000415251 ABCA5Q8WWZ7 1642 aa22.9■■□□□ 1.26
PHTF2-204ENST00000415251 IGF1RP08069 1367 aa22.83■■□□□ 1.25
PHTF2-204ENST00000415251 GRIN2BQ13224 1484 aa22.83■■□□□ 1.24
PHTF2-204ENST00000415251 PBRM1Q86U86 1689 aa22.8■■□□□ 1.24
PHTF2-204ENST00000415251 SNAPC4Q5SXM2 1469 aa22.77■■□□□ 1.24
PHTF2-204ENST00000415251 CSRNP3Q8WYN3 585 aa22.76■■□□□ 1.23
PHTF2-204ENST00000415251 ERICH3Q5RHP9 1530 aa22.75■■□□□ 1.23
PHTF2-204ENST00000415251 FBLN2P98095 1184 aa22.74■■□□□ 1.23
PHTF2-204ENST00000415251 EEA1Q15075 1411 aa22.71■■□□□ 1.23
PHTF2-204ENST00000415251 MAGI1Q96QZ7 1491 aaPredicted RBP22.69■■□□□ 1.22
PHTF2-204ENST00000415251 CARMIL1Q5VZK9 1371 aa22.69■■□□□ 1.22
PHTF2-204ENST00000415251 CHMP7Q8WUX9 453 aaPredicted RBP22.68■■□□□ 1.22
PHTF2-204ENST00000415251 EHMT2Q96KQ7 1210 aa22.66■■□□□ 1.22
PHTF2-204ENST00000415251 FHAD1B1AJZ9 1412 aa22.65■■□□□ 1.22
PHTF2-204ENST00000415251 ADAMTS12P58397 1594 aa22.64■■□□□ 1.22
PHTF2-204ENST00000415251 SYNJ2O15056 1496 aa22.62■■□□□ 1.21
PHTF2-204ENST00000415251 CUL7Q14999 1698 aa22.6■■□□□ 1.21
PHTF2-204ENST00000415251 PRXQ9BXM0 1461 aa22.6■■□□□ 1.21
PHTF2-204ENST00000415251 CHD1O14646 1710 aa22.57■■□□□ 1.2
PHTF2-204ENST00000415251 RAPGEF2Q9Y4G8 1499 aa22.56■■□□□ 1.2
PHTF2-204ENST00000415251 GRIN2AQ12879 1464 aa22.55■■□□□ 1.2
PHTF2-204ENST00000415251 LOC105371045A0A1W2PR82 267 aa22.49■■□□□ 1.19
PHTF2-204ENST00000415251 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
PHTF2-204ENST00000415251 KIF21BO75037 1637 aa22.46■■□□□ 1.19
PHTF2-204ENST00000415251 CEP170Q5SW79 1584 aa22.44■■□□□ 1.18
PHTF2-204ENST00000415251 UBTFP17480 764 aaKnown RBP22.43■■□□□ 1.18
PHTF2-204ENST00000415251 NUP160Q12769 1436 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms